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LotjaGi4g1v0292300.2

Overview

Field Value
Gene ID LotjaGi4g1v0292300
Transcript ID LotjaGi4g1v0292300.2
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Lactation elevated protein 1; TAIR: AT4G30490.1 AFG1-like ATPase family protein; Swiss-Prot: sp|Q3V384|LACE1_MOUSE Lactation elevated protein 1; TrEMBL-Plants: tr|K7MKA9|K7MKA9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0292300
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr4:66393398..66398409) extracted from Lotus japonicus Gifu genome v1.2.

ATTGATTAATATAAGTTGAACCAAATCAGTACAGGAACAACGAAAGTAGGTTCTGTTTTTTATCAAAATAAACGCAATCT ACCTCTCTCTGTTCTCGCTTCCTCTTTTTTCCTCTTCTCGTTCCTCTCTTGTTGGAGTAGTGCCCAGGTTCCTGTTTTCA ATTTTTCCCCTAATCTTCGTTCACTCTTGTTGTTTTTTTCCCTTCATATTGGAATCAATTGGAAATCCCGTTTTCTCTAA TCATAACAATTTCACTTTCACTTTCATCTGCATGATGCATTTCTTTGTCTGATTCTGTCATTAATTTTTGCCACAAGTCA AACACCATTGAAATCTTGTTCTTTTTATTTTTATTTTGATGATTTGGAATAGAGTGTGATGATTTTCTTTCTTTGATTTC AGGGATGAGAAGGGTGGTTCGTCCTGTACGCCAGCTGGCACAAGCCTCTCAGAGGCACCAAAAATGTATTTTGATCACTG ATCCTGTTGCAGAAACACCATTTCACTTTGAAAAGAGCTCTCATCTTCATAGTTCAGCTTATAGAGTTCTTGATCATCAT GTTGAGACTAGCTTAGCTAAAAACTCTTCATTTACAACAAGGGGTCTCTCTATTGATGCTGCAAAACTTACACATGGAGG TTATTCTTTTTTATTTCTTAATTTTTTATATTCTCAATGTCTCTTTGTGCTGGATTGAAGAGGGTTTGAAACTTTTTACT CTTCTTATTTCATTTATGTTGGAATTTATTGTTTCTGTTACAGAAATAGAGAGAGCTGGGCCTCTTGTTGAGTATGAAAG AAGAATTGCTACAGGGGAACTTGTAGATGGAGATAATTTTCAGGTAGTGTGTCTACATTTCATTTATACCTAATTTAATT AATGAAATGGATTTTCATTAATGAAAATGTTGTTGGATATTGTTATGTGTATGTGCATTCATTCATTCATGTCACTTTAT TGGTAATTACTCCACTTAATTTTCCTTTCATTTGTTTAAGCATTTTTTGATGTTTTTTTGAGGCAGTTATACACACTGAC AGAACTTCAGAGATTGTATGATGAGCTTGTTGCATCTGCTGATACCTGCCAATTGGATCGAGACGCAGCCGAAAAACCAG TAAGGTATAGGTTTATTTCTTCCGGGATTTATCTTGCTTCCTGCTGATATGTTAGTTCAAATCTTGAAGCTTTTAGTTTT CTGTTTTTACTTACTGTTCAAGCTTCTGAATTCAATTCAACCTTCTTTTTTTGCAGAAGCGGGTGGCTGTGGTCTCGTCT CTTGTACCATCCTTCTCATTCACCTGTAAAAGGTCTATATCTTTATGGAGGAGTGGGTACTGGTAAAACTATGTTGATGG ACCTGTTTTTTAATCAATTGTGAGTTTGACATGTATTTCTTCTCTGTTTTTCCCTTTTTCCGCTTTTGTCTTACTTGTCA TTGAATTGTTGTATATGTTTTCAAGTCTCAATATAGGCAGGAATACTTTATGAAGCATTTTTATAAAATTTTATGGAAGT GTGTTCTTATGAGGGTCAAACCCTGGATCTTCCGCTGCTCTCTCTAATGTTTGATTTTTTCTTCCTCAGGCCCTCTAATT GGAGGAAAAAGAGGATTCATTTTCATGACTTCATGTTGAATGTACATAGTCTATTACAAGTATGTTTACAAGTGTATGTA TTCTTTTTTCTTTTTGGTAGTTAGAAGGAGCCCAAAACCCTACAGGTTTATGTATTTCTGAAGCACTTAAAACACAGTTT TCTCAAAACAGTCATTGTTGTCTATTTTTTATCTTAAGCTACAATTGAATTGCATTTCTTGTGTCTTTTTGTTGGCAAAA AATCTTTACTTTCCATATGGAAGATTTCCAATAATTATATATATTTTGGAGTAAGAAAGTTTAAGAATCTTTAGTGACTC AGAAGAGGCCTTATGCTATGAGCATTAATTAATTTTGTTAGCAATGTCTTGAATGATTGGCCAACAGAAAAAGAGGAATC ATATCTAAAATTTTCTATTGTCTATCCTTGTAGAAGCACATGGGGTTATCAGATCCACTTGAGGTTGTTGCTGAAGAGAT TTCTGATGAGGCAATTTTGTTATGTCTGGATGAATTTATGGTAAAGTTTTGGTATAATATTTTTCTTCTGGCAATATATC ATACATATTTTAATTTGCTGCCATAGCTTGAGATTTGTTATTTGGTTATCTGTAGGTAACAGATGTTGCTGATGCGTTGT TACTAAATCGCTTGTTTAAACATTTGTTTAGCAAAGGCGCTGTAAGTAATATGATAAGTATATTACCATGCAGCAGCCTC TCTTAAGTCTTAACAATCTGTTTTATGAAATCGTTAACTAATTCATTTCAAATCTCCATTTCTTCATTATGCTTGGACAC AAGTGTAGATTCTAGTAGCCACTTCAAATCGTGTTCCAGACAACCTATATGAGGGTGGACTGCAGAGGGATCTCTTTCTA CCTTTCATTGCAACGTTAAAGGTACGCATGTAATTGTTTCTTTAAGTGAGAATTGTGTTACGTACACTATTCTTAAGCTT ATGGATAAGCCTAAAACTTGAAACTCGATGAAATCAATTATTCAAGAATTTAGTCAATTCAATGCTGGCATGACCAAGAA CAAATGAAGTCTATTTAAATTTTAAGTTTTAGCTAATAGCTACTGTCAAATAATACCCTTACTCATGTCCTCCGTTTCAT GGAATGCTTTCATCTATGTTTTGTAGAAGAAAGTGAAGTTTCCTGTGTATATATATTCATATTCTTCTATATTTTTTGTT TTGTTTTGATAATTGTTTCCTAATTTCTATGTATATGTACTGATGTAGGAAAGATGTGTAGTACATGAGATTGGTTCATC AATTGACTATCGTAAAATGACTTCGGTATGACTTCTGTTCTCTTATCTCTCTCTCTCTCTATATATATATATATATAATA AATCTTTTTAGTATTGATGTCAAATAATTGATTTTTCTATTTTCTTTTTCTGCCATTTCGGACTGCAGGGTGAGCAAGGG TTTTATTTGGTTGGCAGCGGTTTATCTGACTTTCTTAAGAAAAGGTTTCAAGATTTGATAGGAGAAGGCACACCTACTCC CCAAGTAGTGGAAGTAGTAATGGGAAGGACACTGCACGTATGTGCCAAAATTTATATTGCAGTGTGCAAAATCACTGTCA TTGACTCATTATCAATCTTAAGCTTTCTTCATTTTCTTCATCAGGTCCCACTGGGAGCTAATGGATGTGCCTATTTTCCT TTTGAGGAACTTTGTGACAAACCTCTTGGGGCTGCAGACTACTTTGGATTATTCAGTAAGACATATATGTTTGAATGTGT GTGTGTGTGTGTGTATGTTTTATGTCCTATCCAAAAGAAGGATTGTGTTCTGGTTGATTGCTGGGAATTGCTGATGAGGA TGATGAAAGTGACTGTAATTTTAGAACATGATAAAAGTCGGATAATCACTCCATTTTTTTTTTGTGGAAACTTCATTTAC TTTCGCGTTCTGATATTTTTGCTTCCTTTTTACATGTTCATACTTTTACACTACTGCCAATATGTAAGAGATCCATGTTA TATCAATGCTACAAAGAATGTCTATTTATTAGTATTTTTTTTCAGAGAACTTTCATACTTTAGCACTGGATGGCATCCCT GTTTTTGGGGTTAGTAATAAATCAGCTGCACATAGGTTTGTCACCCTGATTGATGTAAGTCCTTTTTCATATCTTAAATG GGTTGCTTATGTTTAAATTTTTTCATCTGTGAGTTTTATCAAACCTTTCATATTTTAATGATTTCTTTCTGCGTAAGGTA AAACCTAGTTATAAGCCACCCATTTGCCTGGTTCGAGCATTAAACAAATTTCCTGTCTTCTTGTTTTCTTGATTATGAGA GGATACTGAGGTTTTCGTAACTAGAACTGAAGAATGTTGACTTTTGACTAGACTATTGGGAGAATGAAATTCTTGGTATA CCCAGAATATTTAAGAGCAAACATTTTTATGGTTGAAAGTTCCGTATCTGAAGTTGTAATTGTAGCGATTTTCAAAGATA GTGAAGCTTAGTCCACTCTGAGGGGCCGTTGGGATGGATAATCATTTGCATTTTTTGTTACCCTCTATATTTATATTTCA TGCACTGAGAAAGTAGAACGGGAATGATGCTTTGTTTTTTGGTGATTATAGGTGATGTATGAGAACAGGGCTAGATTACT GTGCACAGCTGATGGGAGCCCTCAAGACCTCTTTGAAAAAGTAGTAACAGTATCTGAGGCTAAACAAATGGCACCCAGGA CATCTTCAAGATCAAGGAAAAACGATGTAATTGATCTTTGCGTAGACAATGAACTAGGGTTTGCAAAAGACCGGACCATT AGCAGGTATGATATTTCACACAGAAAAAATGTCTTATTTAGTAATTTTTGTTAAGAATATGATTTGATGTTGCTGCCTCA ACTGATGCTAGTTTGGTTTGAAACTCTCATCATCTTAATATTGTTTATTTGGTAACTTTCATAAGCAAGAAAATATAATT TACAAAATACCAGAGATCTACCTCTACTCCTATACTAATGCATATTTGTTGTCGATACTGATTGTGTGACATAAACTTGA TGCAGGCTTACAGAGCTTAACAGCAAGGAATACTTAGAGCATCATGCTGCAACGTTAGCAGAAAAGAAAGAAAGAGTGGA TCAGAATGTCCTTGAAGCTTGAAGAGAGAGCTAATACCTCATAATAGTTTGATTCATATATTATTGTTGTAGCACGCACA TACGGGGTGAATATAGGGTGAAAAGATGAATAATTGCAACCGATAATTTCAAATAAAACACCCCCCATCTACAGACAGTT AGATTCGGCACCTGCATAAGGGAGAGGTGTGCTGTTTGTATCATTGTTGACTAGCATTACCCAAAAATAATGTACAACTA AGTGATGTATAAAAATTCAAATTCAATGGAATGGATTGCAGGTCTTGCTAAC
Download Genomic Sequence

CDS sequence (LotjaGi4g1v0292300.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGAGAAGGGTGGTTCGTCCTGTACGCCAGCTGGCACAAGCCTCTCAGAGGCACCAAAAATGTATTTTGATCACTGATCC TGTTGCAGAAACACCATTTCACTTTGAAAAGAGCTCTCATCTTCATAGTTCAGCTTATAGAGTTCTTGATCATCATGTTG AGACTAGCTTAGCTAAAAACTCTTCATTTACAACAAGGGGTCTCTCTATTGATGCTGCAAAACTTACACATGGAGAAATA GAGAGAGCTGGGCCTCTTGTTGAGTATGAAAGAAGAATTGCTACAGGGGAACTTGTAGATGGAGATAATTTTCAGTTATA CACACTGACAGAACTTCAGAGATTGTATGATGAGCTTGTTGCATCTGCTGATACCTGCCAATTGGATCGAGACGCAGCCG AAAAACCAGTAAGAAGCGGGTGGCTGTGGTCTCGTCTCTTGTACCATCCTTCTCATTCACCTGTAAAAGGTCTATATCTT TATGGAGGAGTGGGTACTGGTAAAACTATGTTGATGGACCTGTTTTTTAATCAATTGCCCTCTAATTGGAGGAAAAAGAG GATTCATTTTCATGACTTCATGTTGAATGTACATAGTCTATTACAAAAGCACATGGGGTTATCAGATCCACTTGAGGTTG TTGCTGAAGAGATTTCTGATGAGGCAATTTTGTTATGTCTGGATGAATTTATGGTAACAGATGTTGCTGATGCGTTGTTA CTAAATCGCTTGTTTAAACATTTGTTTAGCAAAGGCGCTATTCTAGTAGCCACTTCAAATCGTGTTCCAGACAACCTATA TGAGGGTGGACTGCAGAGGGATCTCTTTCTACCTTTCATTGCAACGTTAAAGGAAAGATGTGTAGTACATGAGATTGGTT CATCAATTGACTATCGTAAAATGACTTCGGGTGAGCAAGGGTTTTATTTGGTTGGCAGCGGTTTATCTGACTTTCTTAAG AAAAGGTTTCAAGATTTGATAGGAGAAGGCACACCTACTCCCCAAGTAGTGGAAGTAGTAATGGGAAGGACACTGCACGT CCCACTGGGAGCTAATGGATGTGCCTATTTTCCTTTTGAGGAACTTTGTGACAAACCTCTTGGGGCTGCAGACTACTTTG GATTATTCAAGAACTTTCATACTTTAGCACTGGATGGCATCCCTGTTTTTGGGGTTAGTAATAAATCAGCTGCACATAGG TTTGTCACCCTGATTGATGTGATGTATGAGAACAGGGCTAGATTACTGTGCACAGCTGATGGGAGCCCTCAAGACCTCTT TGAAAAAGTAGTAACAGTATCTGAGGCTAAACAAATGGCACCCAGGACATCTTCAAGATCAAGGAAAAACGATGTAATTG ATCTTTGCGTAGACAATGAACTAGGGTTTGCAAAAGACCGGACCATTAGCAGGCTTACAGAGCTTAACAGCAAGGAATAC TTAGAGCATCATGCTGCAACGTTAGCAGAAAAGAAAGAAAGAGTGGATCAGAATGTCCTTGAAGCTTGA
Download CDS Sequence

Protein sequence (LotjaGi4g1v0292300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MRRVVRPVRQLAQASQRHQKCILITDPVAETPFHFEKSSHLHSSAYRVLDHHVETSLAKNSSFTTRGLSIDAAKLTHGEI ERAGPLVEYERRIATGELVDGDNFQLYTLTELQRLYDELVASADTCQLDRDAAEKPVRSGWLWSRLLYHPSHSPVKGLYL YGGVGTGKTMLMDLFFNQLPSNWRKKRIHFHDFMLNVHSLLQKHMGLSDPLEVVAEEISDEAILLCLDEFMVTDVADALL LNRLFKHLFSKGAILVATSNRVPDNLYEGGLQRDLFLPFIATLKERCVVHEIGSSIDYRKMTSGEQGFYLVGSGLSDFLK KRFQDLIGEGTPTPQVVEVVMGRTLHVPLGANGCAYFPFEELCDKPLGAADYFGLFKNFHTLALDGIPVFGVSNKSAAHR FVTLIDVMYENRARLLCTADGSPQDLFEKVVTVSEAKQMAPRTSSRSRKNDVIDLCVDNELGFAKDRTISRLTELNSKEY LEHHAATLAEKKERVDQNVLEA
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR12169:SF21
78 492 415 5.4E-222 –
PANTHER
PTHR12169
78 492 415 5.4E-222
IPR005654
Pfam
PF03969
85 437 353 5.1E-94
IPR005654
Gene3D
G3DSA:3.40.50.300
124 273 150 3.8E-20 –
SUPERFAMILY
SSF52540
153 279 127 1.67E-14
IPR027417
CDD
cd00009
154 290 137 0.00104237 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0292300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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