Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
Field | Value |
---|---|
Gene ID | LotjaGi4g1v0301000 |
Transcript ID | LotjaGi4g1v0301000.1 |
Lotus japonicus genome version | Gifu v1.2 |
Description | Haloacid dehalogenase-like hydrolase; TAIR: AT4G25840.1 glycerol-3-phosphatase 1; Swiss-Prot: sp|F4JTE7|GPP1_ARATH (DL)-glycerol-3-phosphatase 1; TrEMBL-Plants: tr|I3T577|I3T577_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0301000 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:67527530..67533985) extracted from Lotus japonicus Gifu genome v1.2.
CAAAAATCCCATATCAAAAGGTTCCCGTAAACGATAGAAGGCAAACCCAGGGACGAACAATTGGGAAAGTATTATCTATA AAGGGTTCTGCGAATTGGATTATTTTGGAACTTGCAGACATAACATTGGTGAAACGGTGACACGTGGAAGATAGCTGAGG AATTGACACGTCGGATTTTGTCGTTCTAAACAACCTCTGCATTGTATCTAGTATAGATTAGTATTCCCAAACAGGCTAAA AGGTAAATCACTGAATTGTAACCTAACAAGAAAGAATCAGCCATCAGGTACGTGATCTCAGATCAGGGAATTTGATTCCT GTACAGTAATTAACCCCCAAACTAAGTAATCATTGGAACGTGCAGTGATAGATCGGAGGCAGAAGCACTGCACACTATCG GTCCCATTTCCACGGTTCCTTCAGAATCAGACAAAATGGCGGATCCCTCCGGCGCCGCCGTCTCTGCCAGAACCCCAATC ACCCACGTCGTTTTTGACATGGACGGTCTCCTTCTCGGTATTTCATCTATCCAACATGAATGCATACCCATTTTGAATGT TTAGATAGTTCTATGTTGTGGAGTAGCATTTCATATCTAGATGCATTGTTTGTTTTACGAATTTGATGTGAGCTTGCATC TGGTGCAGACACAGAGAAGTTCTACACTGAAGTTCAGGAGCTTATACTCGCTAGATATAACAAAACATTTGATTGGTCCC TCAAGGCAAAGATGATGGGAAATAAAGCAATAGAAGCTGCTAGGGTCTTTGTTGAAGAGACTGGAATTAGTGATTCTCTC AGCGCCGAGCAATTTCTCGTAGAAAGAGAGGACACGCTGCTGAAACTGTTTCCAACAAGTGATCTCATGCCAGGTATGTA GAGATTATGAATTAATCTAAACTAATTAATGAAACTAGAGATTGAAGACTTTAGTAGTAGAACTTGATTTAGAAAGAGCA TATGAATTTATATATTTCTATAGATGTCTTACACGCAAACATTTGGTTACTGAATTTTCATTTTGTTTGTATAATTTGGC TTGAACCAGTAACTGAGTTTGTGTAGAATAACATGCTAGTGCTGAAAAGTGAGGGCAAGTGAGCGAAAATGAAATGACAG AGAAAGTGAGATCTGAGAGAGAGGAATTAATGATCTGTATTATCATTTGACAATTGATTCAGACTACAAGACTGAACAGA ATTTGAAACACCTGGGGAATGGGAGGGTTACCATTGGATTTTTGGTTTAGATGGTCCTGATATTCATTACGCGGGTGCAT ACAACGAAAATTTTCCGTATGTATATTACAATTATATACTTAGCTATGGATTTGCGCAGCCTCCATGTGATCCATACAAT CCCTATATTCCTGGTGCTCTGATAGAAGTTGACAGTTCATTTGGAGCAGTGCTGCAGTATTACTGCGTCTCCAATTATCA AAACCCTGTTTCTGCGTCTTCTTATATTCCTATTGTTCAACCAAACAATTTCCCTGATAGTTTTATTGACTCATTATTTG ATAACAGTGCTTCTGTCAGTAGACCTGATGGAAGAGGTTTGCAAAATAAGTTCAGTTCAGCTTCTGGCTCTTTTACTCAG AACTCTTCGAAACCATTGTCAAATCAGACAAGTTCCTGGGCCATGGTATCAGAAGGGCCAAAAGCTAATGCTGGGGTGAA GAATGATTTAACGAATCGAAGTGTGTCTGGCAGTTGTTTTCTTAATTTGACTTCATCACCTATCCATCAGGTCCAAAGTG CTGATGCCTCAATCAAGCATTTAGAATTTAGATACTATTTCAAACGGAAATGTTTTGTCCCATCACACTCAATTGAATGT AGCCCCACCTTCAAGTAATAGACTTTCTAACTACAGTTCTAATGCTAATGGACAGCCTGCAATTGCTAAATTTGACCAAA GGTTAATGTTGGCAGAGGGCTGAATGATGTAAATGGAAGCTCTGATGTTTTGGGTGAGCAAAATCAGAGCCCTAGAATTA GTAGGCCTAAACATCAGTTGTCTGTCAAAGCCTATACAACCAAGTCAGGAGGTGATAAGACACTAGAGAATATCATCATT TATCCTGATCAATATAACAGGGAAGATTTCCCTATTGACAATGAAAATGCAAAGTTTTTTGTCATAAAATCGTACAGTGA GGATGATGTGCATAAATGCATTAAATACAATGTGTAGTCATCGACAACACATGGAAACAAGAAGCTGCAGAGTGCTTACG AAGATTCTAGGAGAATAGCTGCAGGGAAATCTAGAGGCTGCCTATCTTTCTTTACTTTTCTGTTAGTGCCAGTGGTCTAT TTTGTGGGGTTTGGTCACTTGACTTCAATAAGGATATGGACTTTTGGCAGTAAGATAAGTGGAATGGGAGCTTCCCTGTG AAGTGGCACATCATAAAAGATGTTCCAAATGCAAATTTTAGGCACATTATACTAGAGAACAACGAGAACAAGCCTGGACT AATAACAGAGACACACAAGAGATAATGTATAGAATAGTTTTGGAAATGCTGAGAATATTCAAAAATCATACTTTGGAGAC GCCTTTGCTAGATGACTTTATTATGAAAACTGTTAGAAAACCATGGAGGAAGAATGCTAAGGTGTTAGTCAAGAGTTTTA AAAGTCCATTATTTGTTCCAGCCTTGGAACCACCTCGAAAAATGAATTTTGTCGCCGACATTTCTCCAGTCAGTGTTGAG AAAAATTCTAAGTTGGATGATGAGTTTGATAGCTTAAAACATACAAGTGTTGAGTGTATTGTTAGATGTTCTGATGTCAC CGGCACTAGTAATAGGATGAGAAGGCTGAGAAAGGCTTAGTTGACAGGGAAGATATTTCTTTTGTCTTGAAGATTGGTTC AGTCACCATTACCCCAACACAGATAGAAGTGTTACTAATAAGGAACCAAATGAGTTGTCACAGTAGGCTAAATGCAAGTT GGAGTTAATGGATTAGTTGAGTCTTCTGGTTTTTTGAAGGTTGGGAGCATCCCACTTGATCCAAGAGCTTTAAAGCCAGA TAGAGGTACTTGAGTTAAAAACAGGTCTAATCCTTATAATTTGCTTACGGATGTCAAGGCACTTTTTGGATCTTCTCTGG TGAAAGGTAGAGTAACATCTGCTTACAATTGGGAAGTTGGGTTTCTTTCAATCTTCGTTTACTGTCTTCATTTGATCGAT ACAACATATCCTGTGGATGGACCTTTGGAGCAGTGTTGAAACAAAAAGTTCTAAATGAATTAGTGTAACCTATTTCATAT TTTGTCTGTCAAAGATCAATATGCAATCATGTTTTCTTCGTTGCAGATTTATACAGTTGTATATGCAAGACTGTAACTGA ACCAGTTGTAACTAATTAATTACAGTTGTAACAGTGGTACCATGATGGAATTTTGTCTTGGGCTATCACAAGTGGCTTCC CTATTATCAGTGGAATCAGAACTGCGATGATGAGTTGCCTTAGCCCCCACCTTGAGGACAAGGTGAACCTTTTTAGGGGG GAGGGGGGTATTGATAGGAGAGCTTTAGAGGGAGTAATGTTGTGGGTTGACAGAGGTAGTTATTGTAATAAAAGCTAACT AATCTAAAGTATGGATGGCTTAGTCAGTTAGTTAGGAAGTTAGTAGAGTATAAAAAGGGGGAGGGGGCTCATTGCAAGGC ATCCAAATTGTAAGATTGAGAACTCTAGGGAATAAAGCTAGGCCTCTAGAAACTCTCAGCAGCTGTGTTCATTCTTTCTT GATTAAAAATAAATTATTTTTCTTCTCTTTTGATGCCAATCCTATCTCTATGTAAAACCTTTAATATAAAATTCTGTTTC TAGTACACTACTATCATGTTTTTAAATTGATGTCCTGTTCCTTTTCATCTACCATAGGTGCTAGCCGTTTACTCAAGCAT CTACATGCAAAAGGAGTTCCAATTGCTTTGGCAACTGGGTACGCTTCATCCATTTTGTGTTAATTTTAATTTATTTTTTA TGCCTTTATCTTTTTGTTTTTGGTAGAGAGAATAGAGATTTATTTTATGTCATGCGTCCTTTTTGGTGGATTTTTTTTAC TGCCAATTTATTTTGACAAACTCCCTTACAGTTCTCTTAGGAAGCATTTTGAATTGAAAACTCAAAGACATGGTGAACTA TTTTCTTTGATGCATCATGTTGTTGTTGGTGATGACCCTGAAGTTAAACATGGCAAACCATCACCGGATGTATTTCTTGC AGCAGCCAAGAGATTTGAGGTATGCCAATTTTTGAATGTTGTCAACTTGATGAAACAGTTATCTGCAGATTAAAGGATTA CATATGACTTTTCTTTTCCTAGTTTGAATTTATGGTTGGGTTCGTTTTGTTAATAATTCTATTTCCAACTTCTTTGTTTT AAATCATACATAGTGATATAGTTAATGATGAATTGATGGTCAACAGGGTGGACCAGTAGATCCTTGTAAAGTACTTGTTT TTGAAGATGCGCCCGCAGGAGTTCTTGCAGCTAAGAATGCTGGGATGTAAGTGGATTGAAGCATCAAATTATATTTATTT TAATTTATTTTTTAACGCAACATGCCATGGCTTCCAAAACGTGCCAAAATTTAGTAAACTGGATAGGTAATCCATATGCT AGCTAGATCTATGTTTCAGATCCTGAATTATTATTTGCACGCTATATAATATATAAAGTATTCATTTGGTGAAATCTTTT TATTCTGTACGCAAACAAAAATTTTGAACCTGACACTTACGAGTTTTGATAAGTTGCATTTTTGTATATGTCCACTAGGC TGTTCTCATTCTCTTCCCCCCTCTCGTATATGCAATACATGACTCTGTTGAAAGTTGATATAAGAGTGTGCATTTCTATT ACTATTAGTCTATGACCTGCATATCTGAGTTGTTAAAGACTGAAATATAAATATCAGAAGCTGGGTAATGAATTCCACTA TCTTGTATGTTCCTGTTAGGCTGTTTTGGCTAAGTTTAAATGTTAACTGATAGCTATTGTAAAAATTGGGCAATTGCTCT CTAAGAGGGAAAAATAATCCTGAATAGAATAGTATTCAAATGGTATCTGCCCCTCCCAAATTTTTTGCACTGTTTGATCT AATTAACTATTGTTGATTTTGCTTAATATGTATTAAAATTTCAAAACCTTAACCTATTTTTCTGGTTTAGTGTCTGTTTA TGTCTCAACCTCGTTTGTCTTTTTAATTCATTTTTACTGATGTATAAGAAATGATCTCTCTCATTTAATATGTACTTGGT ATATGTGCTGCAATTGGTTAACCTTGAAGGTTTGAGGTAGCTACCGGCTATAATGCAATTATTGGGGTTTCAAGATTGAT TGCTTTTTTTATTTATTGCACTATTTAGTTTGCTGATGGTTCTAATGCCTAGAGATTGTCACACCAAATCTGGAGTTGTG GTGGGACTGTCAACTTTCCCTATAGTAAAGTCTAACTGGTGTGCAACCAAATAGTATAATTTGAGAAAAAAAAAGTGGCC AAACCCTGTTGGTACCATAAAATGGACACAATGATTTATCTGGTCTTGATGTCAAGCTATGATGACATGCAGTGTGGTCC AATAGAACATTCAGTTATGATGATGTCTGCTAGTTCCTATTTGTTACTAGTCATTCCTTGCCCTAATCAATTGCATACTA TTTTGGTTAAACATCATGGCTACATACAATGTGTGATTGGAAGTAGTTTTTTCTTATTCAATTTGTTAAATGTTTTATGA CTACATATCATACAGGTCTGTTGTTATGGTTCCTGATGCAAGGTTGGATAAATCTTTACATGCTGAAGCAGACCAAGTTT TGAACTCACTGTTGGATTTCAACCCATGTGAGTGGGGTTTACCTCCATTTGAAGATAATGGAAGCTGAACTTGGGTTTCC ATTACTGTCTTACAATCCCGTTGAGAAAAGGCGTTACAGCTTTTGAACAGCTAAATGTATGATTAATTAATCCATTTCCA TAGATTTTCAGTTACATTATTTGATATTTATATTCTTGTGCTTGGCAATAGTATAATGTTACTGCAATCAATGTCAGCTT GAGACATTAGTCATTTTTTTTGGTCAACTAGAGAGTCGATATATGTTTACCTTTCTCTCTTGTGCATGAAAGTGATTTGA TTTATATTATGTGTGTTTGGTCACCTTTGAAATAGGTTACTCCAATTATATGAAATAGGGTTCAATCCAATTTTGAATCA CATTTGAAACCCTTCCCAATTTCAGAGGATTCTTTGAATAAGGGGAAGATTTCTTAAAGTAAGCATCCCTGTAATTTCCG ATGACCAAATGTCTAAAACAATGATAACATCAAAGTAAGACTCTCATGTAATTTAATTGAGAGTAAAATATATTTTTATT TCTTAGGGACAGTGATTGGTTAGTCCATAATTGTATGCCCAATTTACTTATTATCC
CDS sequence (LotjaGi4g1v0301000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGGATCCCTCCGGCGCCGCCGTCTCTGCCAGAACCCCAATCACCCACGTCGTTTTTGACATGGACGGTCTCCTTCT CGACACAGAGAAGTTCTACACTGAAGTTCAGGAGCTTATACTCGCTAGATATAACAAAACATTTGATTGGTCCCTCAAGG CAAAGATGATGGGAAATAAAGCAATAGAAGCTGCTAGGGTCTTTGTTGAAGAGACTGGAATTAGTGATTCTCTCAGCGCC GAGCAATTTCTCGTAGAAAGAGAGGACACGCTGCTGAAACTGTTTCCAACAAGTGATCTCATGCCAGGTGCTAGCCGTTT ACTCAAGCATCTACATGCAAAAGGAGTTCCAATTGCTTTGGCAACTGGTTCTCTTAGGAAGCATTTTGAATTGAAAACTC AAAGACATGGTGAACTATTTTCTTTGATGCATCATGTTGTTGTTGGTGATGACCCTGAAGTTAAACATGGCAAACCATCA CCGGATGTATTTCTTGCAGCAGCCAAGAGATTTGAGGGTGGACCAGTAGATCCTTGTAAAGTACTTGTTTTTGAAGATGC GCCCGCAGGAGTTCTTGCAGCTAAGAATGCTGGGATGTCTGTTGTTATGGTTCCTGATGCAAGGTTGGATAAATCTTTAC ATGCTGAAGCAGACCAAGTTTTGAACTCACTGTTGGATTTCAACCCATGTGAGTGGGGTTTACCTCCATTTGAAGATAAT GGAAGCTGA
Protein sequence (LotjaGi4g1v0301000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MADPSGAAVSARTPITHVVFDMDGLLLDTEKFYTEVQELILARYNKTFDWSLKAKMMGNKAIEAARVFVEETGISDSLSA EQFLVEREDTLLKLFPTSDLMPGASRLLKHLHAKGVPIALATGSLRKHFELKTQRHGELFSLMHHVVVGDDPEVKHGKPS PDVFLAAAKRFEGGPVDPCKVLVFEDAPAGVLAAKNAGMSVVMVPDARLDKSLHAEADQVLNSLLDFNPCEWGLPPFEDN GS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 8 | 239 | 232 | 1.5E-155 | – | |
PANTHER | 8 | 239 | 232 | 1.5E-155 | – | |
SFLD | 14 | 228 | 215 | 2.0E-40 | – | |
SFLD | 14 | 228 | 215 | 2.0E-40 | – | |
SUPERFAMILY | 14 | 227 | 214 | 5.69E-44 | ||
CDD | 15 | 206 | 192 | 8.46615E-106 | – | |
Gene3D | 18 | 224 | 207 | 6.4E-72 | ||
Pfam | 18 | 204 | 187 | 7.4E-23 | ||
Gene3D | 29 | 98 | 70 | 6.4E-72 | ||
TIGRFAM | 98 | 204 | 107 | 1.6E-11 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. |
Expression pattern of LotjaGi4g1v0301000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…