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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0349600 |
| Transcript ID | LotjaGi4g1v0349600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein FAR1-RELATED SEQUENCE 7; TAIR: AT3G06250.1 FAR1-related sequence 7; Swiss-Prot: sp|Q9M8J3|FRS7_ARATH Protein FAR1-RELATED SEQUENCE 7; TrEMBL-Plants: tr|I1MFB6|I1MFB6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0349600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:72862450..72866558) extracted from Lotus japonicus Gifu genome v1.2.
AAATTTTCTTGATCCATATAAATTCCCCCCACACACTTCACAACATACACCATCCCCATCTCACTTTCACCACCAAATCG ATTCCTGCAACCTTGAGGTAAATTTTCTTCACAAAACCCTAGCTTTCATCAATCTATTCCTTTTCCCCCTTTTTGAATTG ATGTGATTTTGTCTCAGATTTTGTTAGATTTTTATGGAGGAGAATTTGAATTTGGGATGATGATTGCAATGGAAAACCCA GTGGGTACTGAACTAGCAATGAACAATGCTAGTGTTGTTGTTGAAGTAATTGAATTTTCCTGTGAACCATACATAGGGTT AGAATTTGATACATCAGATGAGGCGCTTAAGTTTTATGAATCATATGCAAAGCGAACAGGATTTAAGGTTCGGATTGGTC AGCTGTACCGGTCGAGGACTGATGGGTCTGTTTCTTCTCGAAGATTTGTCTGCTCAAAGGAGGGTTATCAGCTCAGTTCA AGAACAGGTTGTCCAGCATTCATAAGGGTGCAAAGACAAGATTCTGGGAAGTGGGTTGTTGATCATTGCTTCAAGAGCCA CAATCATGATCTTGAAACTGAAAGTGCATATTGCAATCCAGATTTGAAGCAGAAGGGTGCTGCAACTATCAATTCTTTTG TTAATGTGCCCCACAGGCGAAGGAAGAAGAAATTGTTGCTTGGAGAAGCCAAGGTTATTGATTTCAAACGCCTGAGAAAA GAAGGGGGTGATGGACAGTCTAAGTTTGAACCATTTGTAGGTCAAGTGTTCAATTCAGCTAATGAAGCCTACCAATTTTA TCATGCATATGCAGCATCCGTTGGTTTTGGAGTCCGAATTGGTCAGCTGTTTCGTTCGAAGAATGATGGCTCGATCACAT CCCGTCGATTTGTGTGCTCGAAGGAAGGGTTTCAGCACCCTTCGAGAGTTGGTTGTGGGGTTTATTTGAGGATTAAGAGT CAGTCATCTGGCAAGTGGGTAGTGGACCGTCTCGAAAAAGACTACAATCATAATCTGGATATGGAAAAAGAGTGTAGACA AAATCACATTAAAGATGACTGGTATACTGTGCTTTTACAGTATTTCCAATCAAGACAAGCCGAAGATACAGGATTCTTTT ATGCTGTGGAAGTTGAAAACGGTAAATGCATGAGCATATTTTGGGCTGATGGAAGATCTAGATATTCATGTAGTCAGTTT GGCGATGTCCTTGTTTTAGACACGTCTTATCGAAAAACTGACTATTTGGTACCCTTCGCTACTTTTGTTGGCGTTAACCA TCACAAGCAACCTGTGCTTCTTGGATGTGCTCTAATTGCTGATGAATCTGAGGAGTCTTTCACCTGGTTGTTTCAGACTT GGCTGAAGGCAATGTCTGGTCGGCAACCCCTCTCAATAATAGCTGATCAAGACATTGCAATCCAGACGGCAATAGCTAAA GTCTTTTCGGAAACCCATCATCGCTTTTCATCATGGCAAATTAAGGAAAAGGTACAAGATAATCTGGGTCTGATGGGCAA TGAATTTTTAAATGATTATGAAAAGTGTGTTTACCAGAGTCAAGCAGTTGACGAATTTGACACTGCATGGAATGCCTTGC TCAACAAATACGGATTGAAGGATAATGCTTGGTTAAAAGAGATGTATGAGAAGCGTGCATCGTGGGTTCCAATATATTTG AGGGGATTTTTTTTCGCTGGCATTCCCATTAATGATAGTGTTGATTCATTCTTTGGTGCACTTTTAAATGCCCAAACACC TGTCATGGAGTTCATTTCACGGTATGAGAGAGGCCTTGAGCGACGTCGGGAAGAAGAAAGAAAAGAGGATTTAAATGCTT CCAATTTTCAAACATCTTTGCAAACAAAAGAACCGGTTGAAGAACAATTTAGAAGGCTTTACACTCCTACCATATTCAAA GTATTTCAAAAAGAGCTTTTGCAATGCTATAGTTATCTCGGATATAAAAGCTATGAAGAAGGGGGGCTTAGCAGATATTT GGTGCGGAGGTGCGGGAATGATCTGGAGAAGCATTTTGTTACATGTATTGCGTCCAATCTAGGCATTAGTTGCAGCTGTC AGATGTTTGAGCATGAAGGTGTCCTTTGTAGACATGTTTTAAGGGTTTTCCAAATATTGGAATTGAGAGAAGTTCCGTCT CGCTACATCTTACACCGATGGACAAGAAATGCGGATGATGGTGTTTTCCTGACATTGAATCCTAGAGTAGCTCTCAGAAA CTGAGGAATTTGATGTTATGGAGTTTAAGAGAAACTGCATCTCAATTGAAACGTATAAACTTGCTTCTGAGATTTTGCGA GAGGGTGGAAGGAAGCTCTGTTGGTATAGGTGAATACTTCTATTTTGTGCGGGGTTGTACATAGCTGCACAATTAAACAT TATAGTTTGTGATGTTCTTTCTAGTGACATTTATGCCTTTATAACAAAAATTCCAATGTTTTTCTTGCATAGATGATAAC AATACTTTAATTTTAAGCCAATGATGCATGGTTTAGGATTGCAGTTTCTTTTAACCATTGGTTTGCACAATGGAGATTGT GTTGTTGACTCCATAAATGAAATGACGCCAGTTCTTTTATGGCATTTTGATAATACTAGGGACCTTTTGATATGGTATCA TTTTCAATCCCTTCAGTCTTCACATACTTTATTGAGTTATTCTGTTGTAAGTAATAGTTTTTGTAAGGTTCGTCTTTAAA AAAACTTAGATTCCATTAATATTATATATCATCTAGTTCAAAAAAAAATTATATATCATCATAATACAAATAAGATGTGA AACCTCATTCTTACAAGTCATATAGCATATTACACAACCTCATTCTTCTTGTTTGTTATCATCACACATCTTCAACTTGT TCACCAGCAGGGAGTGAAAGCAGAGACTCTGTATACATGGCCAGGGAAACATAAGTATAAGGATATTCATCATAAGAGCA GTGCTCTAGTACCTCTCCTTCGCCATTATACTTCACCAGCTCCTTATAACCATCTGTTCCAACAATATCACCATTTTTTG TACAACATATTGGGGAAAAGTATTTATTGGGAATGTCATTTAAAGATAGAGCAAGAGTCATAACCCAAGATGACTGCAAT TTGTACCTTTCCATCACCCATATACTAACTGTATCAGCCTCCACAACCCATAGACTGAGAAATCCTCGAAACACCCACAC ATCATAATCTGCAGATTCATGGTAAAATTCATCTGGCAGAGGTATATCAGAAAGTCTTTTTTCAACTAAATCAAATGCAA CAATAAGATCAACATTTATATCGTGACGAAAAGCCACCCAATGAATAGCATCATGCAAGAGTGACCCAACTCTGGGATCA TCGCCAGCGTTCATATAAGGCAAATGGGTACCCTCAATTTCTTTCCATGTATTGGCTCTCCAAGAGAAAAACTCCAAATG GGTTAAATAATCAGCTGAGTTTGGATCATATGAAGCTAGAACCACTAAATAGTCATCTTGTGATGGGTCGTAGCCAAAAC CATATAGATAGGTGAAAAGGAAGGCATCCACATTGGAGGAAATAGGTGGATGTGGTATTTGGTTGTGAACACCAGTGGAT GGATTCCAAAGAAACAGGTTTGGATTACAATCCAAAAACAGAAACCCTCTACACGAACTAAGATGAAAGTAATATGAAGG AAGCATGAATTTAAGTTCTATTGTAGTAGATGCAGAATCATCGTTTAGTGATGCATCATCTAAGTCTATAGATCGAGTTT CAGGAACAGAAGCTGGTGCTAACAAGAGCCTATGGGTGAGTGCCGCAGCTAGTTGAAAATGTGATTTTGCAAAGTGGGGA TCAGTGATGAGTGAAAGCCATGACTTACAAACGCACTTGAAACGTACAAGAGACTTCACTGGCAACCTCAACAGGATCTG AATTATCAAATCCATTGGTAGATTGAGGGTCTTTTTGTTCATGTTTGTTCGTCCTCTGCGGCTGTATCTCTTCATTTTGG TGCACTTGATCACTTTGTAGTATATATGAAGTCCGTGATGTTATAATTTTATATATAGATAGGAGAAAGTAACGTTTCTT GTTCCTTCTATGGTACTCTTCCATCTTCA
CDS sequence (LotjaGi4g1v0349600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGATTGCAATGGAAAACCCAGTGGGTACTGAACTAGCAATGAACAATGCTAGTGTTGTTGTTGAAGTAATTGAATT TTCCTGTGAACCATACATAGGGTTAGAATTTGATACATCAGATGAGGCGCTTAAGTTTTATGAATCATATGCAAAGCGAA CAGGATTTAAGGTTCGGATTGGTCAGCTGTACCGGTCGAGGACTGATGGGTCTGTTTCTTCTCGAAGATTTGTCTGCTCA AAGGAGGGTTATCAGCTCAGTTCAAGAACAGGTTGTCCAGCATTCATAAGGGTGCAAAGACAAGATTCTGGGAAGTGGGT TGTTGATCATTGCTTCAAGAGCCACAATCATGATCTTGAAACTGAAAGTGCATATTGCAATCCAGATTTGAAGCAGAAGG GTGCTGCAACTATCAATTCTTTTGTTAATGTGCCCCACAGGCGAAGGAAGAAGAAATTGTTGCTTGGAGAAGCCAAGGTT ATTGATTTCAAACGCCTGAGAAAAGAAGGGGGTGATGGACAGTCTAAGTTTGAACCATTTGTAGGTCAAGTGTTCAATTC AGCTAATGAAGCCTACCAATTTTATCATGCATATGCAGCATCCGTTGGTTTTGGAGTCCGAATTGGTCAGCTGTTTCGTT CGAAGAATGATGGCTCGATCACATCCCGTCGATTTGTGTGCTCGAAGGAAGGGTTTCAGCACCCTTCGAGAGTTGGTTGT GGGGTTTATTTGAGGATTAAGAGTCAGTCATCTGGCAAGTGGGTAGTGGACCGTCTCGAAAAAGACTACAATCATAATCT GGATATGGAAAAAGAGTGTAGACAAAATCACATTAAAGATGACTGGTATACTGTGCTTTTACAGTATTTCCAATCAAGAC AAGCCGAAGATACAGGATTCTTTTATGCTGTGGAAGTTGAAAACGGTAAATGCATGAGCATATTTTGGGCTGATGGAAGA TCTAGATATTCATGTAGTCAGTTTGGCGATGTCCTTGTTTTAGACACGTCTTATCGAAAAACTGACTATTTGGTACCCTT CGCTACTTTTGTTGGCGTTAACCATCACAAGCAACCTGTGCTTCTTGGATGTGCTCTAATTGCTGATGAATCTGAGGAGT CTTTCACCTGGTTGTTTCAGACTTGGCTGAAGGCAATGTCTGGTCGGCAACCCCTCTCAATAATAGCTGATCAAGACATT GCAATCCAGACGGCAATAGCTAAAGTCTTTTCGGAAACCCATCATCGCTTTTCATCATGGCAAATTAAGGAAAAGGTACA AGATAATCTGGGTCTGATGGGCAATGAATTTTTAAATGATTATGAAAAGTGTGTTTACCAGAGTCAAGCAGTTGACGAAT TTGACACTGCATGGAATGCCTTGCTCAACAAATACGGATTGAAGGATAATGCTTGGTTAAAAGAGATGTATGAGAAGCGT GCATCGTGGGTTCCAATATATTTGAGGGGATTTTTTTTCGCTGGCATTCCCATTAATGATAGTGTTGATTCATTCTTTGG TGCACTTTTAAATGCCCAAACACCTGTCATGGAGTTCATTTCACGGTATGAGAGAGGCCTTGAGCGACGTCGGGAAGAAG AAAGAAAAGAGGATTTAAATGCTTCCAATTTTCAAACATCTTTGCAAACAAAAGAACCGGTTGAAGAACAATTTAGAAGG CTTTACACTCCTACCATATTCAAAGTATTTCAAAAAGAGCTTTTGCAATGCTATAGTTATCTCGGATATAAAAGCTATGA AGAAGGGGGGCTTAGCAGATATTTGGTGCGGAGGTGCGGGAATGATCTGGAGAAGCATTTTGTTACATGTATTGCGTCCA ATCTAGGCATTAGTTGCAGCTGTCAGATGTTTGAGCATGAAGGTGTCCTTTGTAGACATGTTTTAAGGGTTTTCCAAATA TTGGAATTGAGAGAAGTTCCGTCTCGCTACATCTTACACCGATGGACAAGAAATGCGGATGATGGTGTTTTCCTGACATT GAATCCTAGAGTAGCTCTCAGAAACTGA
Protein sequence (LotjaGi4g1v0349600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMIAMENPVGTELAMNNASVVVEVIEFSCEPYIGLEFDTSDEALKFYESYAKRTGFKVRIGQLYRSRTDGSVSSRRFVCS KEGYQLSSRTGCPAFIRVQRQDSGKWVVDHCFKSHNHDLETESAYCNPDLKQKGAATINSFVNVPHRRRKKKLLLGEAKV IDFKRLRKEGGDGQSKFEPFVGQVFNSANEAYQFYHAYAASVGFGVRIGQLFRSKNDGSITSRRFVCSKEGFQHPSRVGC GVYLRIKSQSSGKWVVDRLEKDYNHNLDMEKECRQNHIKDDWYTVLLQYFQSRQAEDTGFFYAVEVENGKCMSIFWADGR SRYSCSQFGDVLVLDTSYRKTDYLVPFATFVGVNHHKQPVLLGCALIADESEESFTWLFQTWLKAMSGRQPLSIIADQDI AIQTAIAKVFSETHHRFSSWQIKEKVQDNLGLMGNEFLNDYEKCVYQSQAVDEFDTAWNALLNKYGLKDNAWLKEMYEKR ASWVPIYLRGFFFAGIPINDSVDSFFGALLNAQTPVMEFISRYERGLERRREEERKEDLNASNFQTSLQTKEPVEEQFRR LYTPTIFKVFQKELLQCYSYLGYKSYEEGGLSRYLVRRCGNDLEKHFVTCIASNLGISCSCQMFEHEGVLCRHVLRVFQI LELREVPSRYILHRWTRNADDGVFLTLNPRVALRN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 273 | 272 | 0.0 | – | |
| PANTHER | 2 | 273 | 272 | 0.0 | ||
| Pfam | 45 | 120 | 76 | 2.3E-18 | ||
| Pfam | 193 | 267 | 75 | 7.2E-18 | ||
| PANTHER | 268 | 666 | 399 | 0.0 | – | |
| PANTHER | 268 | 666 | 399 | 0.0 | ||
| Pfam | 331 | 424 | 94 | 1.1E-25 | ||
| ProSiteProfiles | 607 | 642 | 36 | 10.126 | ||
| Pfam | 608 | 639 | 32 | 1.1E-7 | ||
| SMART | 617 | 644 | 28 | 1.3E-6 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. | ||
| Molecular function | Zinc ion binding | Interacting selectively and non-covalently with zinc (Zn) ions. |
Expression pattern of LotjaGi4g1v0349600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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