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LotjaGi4g1v0352800.1

Overview

Field Value
Gene ID LotjaGi4g1v0352800
Transcript ID LotjaGi4g1v0352800.1
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description ATP phosphoribosyltransferase; TAIR: AT1G09795.1 ATP phosphoribosyl transferase 2; Swiss-Prot: sp|Q8GSJ1|HIS1B_ARATH ATP phosphoribosyltransferase 2, chloroplastic; TrEMBL-Plants: tr|A0A151T870|A0A151T870_CAJCA ATP phosphoribosyltransferase; Found in the gene: LotjaGi4g1v0352800
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr4:73134456..73140271) extracted from Lotus japonicus Gifu genome v1.2.

GCGAAACAACGCGTTCTGCACCTACCAAAGTATTCCATAACCTGCAATAATCTTTGATGAGCTGAGCCCTTCCTGATAAG AAGAGCCACCGGTAGCACGCAATCTCTCTGTTCCAAAACCCCCATTGCCCACCGAACCGCCGTAGCTTCCGCCACCACCG CCGATCAACCTCCAACCAACACACCTTCTCCATCTCCAGAGTGACTGATTTACTGTGTGGGGGGCAATGTCGACGATGAT GAGTTTTCAAACTTGCTTCAGAGTAAAAACCACGACCTGCTACGCTTCACAGAGAACTGCTGGTGAGGTCTTGACGGCAA ACCCTAGCAGCAGACTCTCTGAAAGGCAAGAGGTTCGTCTTGGTTTGCCCAGCAAAGGTCGCATGGCAGCTGATACCCTC GAACTTCTCAAGGTTTCACTCTCATCATTTCTATCCAAATTTGAGTTTATTCACCCTTTTACTGACTCTAACTCCAATTT GCTTGTTGGTTTGTGAAGAATTGTCAATTGTCAGTGAAGCAGGTCAATCCTCGACAGTATGTTGCTCAAATTCCTCAGGT AATTGTGTTTTTGTGGTTGCTAGTTCCATTTTGATTTATGATTCCTCGCCGATTGATTGATTGATGTTGAATTAATCTTC TAATGTTGCAGATTTCCAGCTTAGAAGTTTGGTTTCAAAGGCCTAGTGACATTGTAAGAAAATTATCATCTGGAGATCTT GACCTTGGTATCGTCGGACTTGATACTCTCAGGGAACATGGCAAGGTGAGCATAGCGCTACTACGTGACACGGCCCAATC ACACACGACTACCACCACATTTTAAATAAACCAATAGCATGAATGCAAATATTGGCTTAGGAGAGAAAAGATGGTTCTGT TACATATTAGACAGAGCATAACACTTGGTCCTGCGTTTTACACCACAATATAGTTGTGAATTTATGTTTTTTCATTGCAC ATTGCACAATATAAGCAACTATTTCTTGAGTTTGGTAGCCACTTTTATTACCTGTTTCCGGGATAAAACTTCTAAGCATA AAATGTTGATTCTTCCACTAAGCTTAACTGCAATTGCAGATTGATGCCTTAGGGTATACACAAGAACCAAAAAATTTATC TTATAATTTTCCTTTGTTAGGATGATCCAGATCTTATCGTTGTCCACGAGGCTCTGGAATACGGTGATTGCCGTTTGTCC CTTGCGGTGAGTTAAAAATTTATTTTTCTATAACCTCTTGATCCTGCTCTTGCCATTGTTTGCACAATCAATTGTCTAGT AAATCCCCTGTTTTTTCAGATTCCCAAATACGGAATATTTGAAAACATACATTCCCTGGAGGAGCTAGCTAAAATGTCTC AGTGGACAGAAGAAAGGCCTCTACGAGTTGCTACTGGATTCACCTATGTATGTGTTTCAAATTCAACTAATATTTGTAAC ATTCTTTCTTTTGTAAGCTTTTTAAAAGTGAAATTTTGATCTGATTTTTCTCTTACTGTTCAGCTGGGTCCTAAATTTGT GAAAGATAAGGGGCTTAAAAATGTCGCATTTTCAACTGGTGATGGAGCACTGGAGGCGGCTCCTGCGGTGAGAACCAGTT TTTGTTTTATTAGAAGTTATTTATTTAACTCCTCTAATTATCAAGCATATAATTGGCAATTCCATGTTACAACATTATTT TTGGTTATAACACAGAATAATTTTGTTGGGATTTGGGAGGAGGTTACTTTCTGTAGTTGTTACTAAATGTTATATCTTTT TTTGTGGCTTAATATACTTGTCATTGTTGAATGTTGATCCCAGACACTTGTAAACATCTTGTTAATGTGTAACAGCTGAA ACAGATTATGTTGAAATTTCATCTATAGGACGAAAAACTGTCTAACGGATTATTCTTTTATATAAGTCTTGGTTTTATGA ATGAAACTCTTGCTCTTTGTTATTGAGTTTTTCATAGATAATTCTTACCTGCATAATTTAGATTATTCAATGGGTTTAAG GTTGAGACTGTGAAGTTTGAGAAATATATTATATTTGTTATTTGTTATACAGTCCAATACGTAAGGAATGATTGCAAATC ATGATAGCTGTCATAAACCAACTATCCCAACAGCTTAAACTATTGATGGAAACATATGAATAATTTGATATTGTATTTCT ATCATGCACCCCTACACAAGAGCCCATTTGGCTTGAAGTGCAGACAATCCACAAGCCTACCTACCTAATGGTGAAATTCT ACTTTTTTATTAAATTCACAAGGGCAACAAGGAACAAAGTCTAGATCACTTGGTCATAGAGGCTATGATACCGTTACCAT GTCATGAACCAACTATTCCAAAAACCTAAGCTGTTGGGTGAAGACACATTAGTTGTTTTATATTGTATTTCTAATAAAAT CCAAGCAGTTAGTTTTTAGTTTGTAGTGGCTTTAAATCTGAACAGTTTAATAATTTTTTCTGTTAGAAGAGCAATATTTC TCGAACTCCTTGAATTTTATATTTATCTCCAAATCCTTAGAAAATGAAGATATGGTGCTTCTGATGTATAATTTTAAGAG GGTGACACAACACAACTACAAAACTCAAGTTGTAACTTTTAGAAAGAGGTATCGTATATTACAAATAGTCTAATGAATGA TCAGTTCTCTTTTACGATTTTCTTTAAAAATTGAAATAGTCTCCTATGAGAGTATATTGAGTAGTTAAACAAGGGTGTTT ACACATTGCACTGTTATTTGTGAAATGACAACAAACTTCGGTGGTTTATCTGTGACAACATCCATAGCTTGATTTTAATC AATTCATGATGCTAATTATGATACTTTCTGTAGAAGTTATATCCTCTTTCCTCTAAAACCATTTTCTGTTTATTCTTTTG CTTTATGGTGTATGGATCTTTGTGCCTGAAATGAAGAGATCAGTTTCGGCCGTGAACTTTTTTATTGACACTGCTGCCAT ATGCTTGACATGATTATCAAGATAACTGTTTGTCTTTGGCCTTGTTTAGATGGGGACAGCTGATGCTATCTTGGACCTTG TGAGTAGTGGGATTACACTGAAAGAAAATAACCTGAAGGAAATTGAAGGAGGAGTTGTTTTGGAAAGCCAGGTAAGCAAT TATTGACTATTCTGAGACTAGCATGATCTGTTGGTTTTAAAACTTAAAAAATAAGAAAGCAGACACCCGGTAGCTGCACT TGCATTGTGCCCTGTACGATTTTGTCTCATCCTGACAATCGAATGCTCTTCAGGCTGTTCTTGTTGCAAGCAGAAAATCC ATGGTCCAACGGAAAGGAGTACTTGAAACAACTCATGAGATGCTTGAAAGATTGGAGGCACATCTGCGGGCTATTGGGCA GTTCACGGTGCGTATGTAGAATATAGAATTTATAATTTCCACTTTCCATCCTTTCAAAATGGAGGCCTGTTCATGGGTTT GAACAGAAAATCAAACTTAACCGGAAAGCAGTTATGCCAAACTGAACAAACCAAACTTGTTATAGTATAGAGGAAACCAA ACCAGTTATTTGATTCAGTGAACCGGTTTTAGTATTGCGAACTGGTTTGGATTTATGAACCGTTTCAAGAGCAGGTTTTG TTTAAGAAACAATTCAAGTAACAGTTATGCTGATTTCAGAACCACTTTAAGAACTGCCACTTTAAGAACCAATTTAAAGA ACTGGTTTTGAGAACCAACCAATTTGGGAACTGACATTACCACTTAAAGGTAGCAGCAAATCAGTTTGCTGCATGAAGAA ATTAGTTTTAAGAATAAAAAAATAGGGTAAACGAATAACTACATGTTATTTTCCTGTTGAACAAGCACCTTGACCAAATG CAACTTGCGATTTGCTCACAGCTTGCTATATGTAAATGTAAAGATTTTGAGAACGGATCCAATAGGAATAACAATTTTAT ATATATGAAAACTGAAAACAGACTTCACAAGGAAAATGATTCTAGTATCACCTGGCTCATGACGATCAACGATTTAGGGT TCAGTAGTTGAGGGAAGGGGTTATAGTCCACAACTCACAAGCGAGAGAATCGGGACGCAGCCTTTAGCCATCAGAGAATC GCAAGAGGGTCATAGTTTGCATGAGAAATTTAGTGTCCAAGTTGTCTTTTAGAATTAGTTTGACTAACCCCTTTAGTGGT TTGGTGTGTTGAGAGAGAAGAGAAATGTGTGACATACGATGTAAATTCAGTTATTATAATACAAGAATTTACAATTAATG TAACCATAATAATATACAATACCTAATACTCACAATTATTCTATTTACATTATTTCTAACACAGCGATTTTTTGGAGTGA GGTTAGTGCAACTTACAATTAAAATCGATTCACAATGAATTATGCACATGCCTACCAAATTCCAGTGTCTGCTTTTCTTT TCATTCCATTTTATAATGCTTGACTTGGTAGGTTACTGCAAACATGAGAGGAAGCAGCGCAGAGGAAGTGGCTGAGAGGG TACTGAGTCAACCATCATTATCTGGGTTGCAGGTATGATATTGAATGAAATATTTACATTTTCGGGGAGGATCTTCCCTT ATAAACATTTTCATTCTAAACTAGCAAAATCCGATATATACTGTGCATTGTAATTATGAGTAGTGTCATGTTTTTGAGAG GTATACCTGATTGTCTAATATCTGCAGGGACCCACTGTTAGTCCTGTTTTCTGCAAACGTGATGGGAAGGTGACCGCAGA CTATTATGCCATTGTCATATGCGTGCCCAAGAAGGCACTATACAAGTCTGTGCAACAACTTAGAGCGGTGAGTTTTTGAA CTGATAACAAATGCGTTGTTTTTTTCAAGTTTTTGTCAAACTAATGGGTATAGTCTTGAGCTCTTAGAATGAAGTGTTTG AATGAGCAGCATGTGGAGAAACTAGTTATATTGGTTCTGCATAAATTATTACTCTATATGATTCTGTTGCCATGCCAGCA GCAAACATGACTATTAAATTGGATTCATTTCAAAATTTCTGCTTTTATCATATGACATTATATTTTAGTTAGATACAACA CCTGCTGAGTTGAACTGTATATCTAAATTCTAAACTATTATTTTTCTTATTCATCTATGATTCTCGTAGCATAATACCAC TTCCTTGTTGACTACATATGCAGATTGGAGGAAGCGGTGTTCTTATATCACCCTTGACCTATATTTTTGATGAGGAAACT CCAAGATGGCGTCAGCTCCTCTCTGAACTTGGGTTATAGCCCTTCAAGATCAATTAATGTAGTTGTTTTTTCCCCAGATC AAAGCAAAAAGCTTCTGGCTCGTCCTTCATGGAGCAACTCCTACTTCTGCATTACTTTAAAGACTGAAAATTTTGTAGCA AGCCTGTATTATTTTTTCTTAGAGTAGTGACTCCACGCCACACCCCCCAAAGTTGTGGGATTTATGGTTAAGTATTGTAA TGTTTTAGTGGATTTTATTTGTGACCTCAATGAAGTTGGCCATATTCCAAATGAAGTTTGATTCATTATGATATTGGAAG GTTGTGGCTATGATAGCCTAAAATATAAGGCGGATTCATTATGATATTGGAAGCTTGTGCAGTGTGCACCACTATGTTAA TATAATTACACAATTACCCCTAAATTGATTCATAATGAAATTGGAAGCTTGTGGGAGCGCTTATCATAAATCAATATGGT AGCCTAAAATAGAGTTAAATATATTTTAGTCATTAACGTGTAAACTTGAGTCTAAAATGATTCTTGAATTTTTTATAGCT TTTACTCCCTGACAATTTTTTTAACTAAAGACCTATGATGCTATAATATTTGTGTA
Download Genomic Sequence

CDS sequence (LotjaGi4g1v0352800.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGTCGACGATGATGAGTTTTCAAACTTGCTTCAGAGTAAAAACCACGACCTGCTACGCTTCACAGAGAACTGCTGGTGA GGTCTTGACGGCAAACCCTAGCAGCAGACTCTCTGAAAGGCAAGAGGTTCGTCTTGGTTTGCCCAGCAAAGGTCGCATGG CAGCTGATACCCTCGAACTTCTCAAGAATTGTCAATTGTCAGTGAAGCAGGTCAATCCTCGACAGTATGTTGCTCAAATT CCTCAGATTTCCAGCTTAGAAGTTTGGTTTCAAAGGCCTAGTGACATTGTAAGAAAATTATCATCTGGAGATCTTGACCT TGGTATCGTCGGACTTGATACTCTCAGGGAACATGGCAAGGATGATCCAGATCTTATCGTTGTCCACGAGGCTCTGGAAT ACGGTGATTGCCGTTTGTCCCTTGCGATTCCCAAATACGGAATATTTGAAAACATACATTCCCTGGAGGAGCTAGCTAAA ATGTCTCAGTGGACAGAAGAAAGGCCTCTACGAGTTGCTACTGGATTCACCTATCTGGGTCCTAAATTTGTGAAAGATAA GGGGCTTAAAAATGTCGCATTTTCAACTGGTGATGGAGCACTGGAGGCGGCTCCTGCGATGGGGACAGCTGATGCTATCT TGGACCTTGTGAGTAGTGGGATTACACTGAAAGAAAATAACCTGAAGGAAATTGAAGGAGGAGTTGTTTTGGAAAGCCAG GCTGTTCTTGTTGCAAGCAGAAAATCCATGGTCCAACGGAAAGGAGTACTTGAAACAACTCATGAGATGCTTGAAAGATT GGAGGCACATCTGCGGGCTATTGGGCAGTTCACGGTTACTGCAAACATGAGAGGAAGCAGCGCAGAGGAAGTGGCTGAGA GGGTACTGAGTCAACCATCATTATCTGGGTTGCAGGGACCCACTGTTAGTCCTGTTTTCTGCAAACGTGATGGGAAGGTG ACCGCAGACTATTATGCCATTGTCATATGCGTGCCCAAGAAGGCACTATACAAGTCTGTGCAACAACTTAGAGCGATTGG AGGAAGCGGTGTTCTTATATCACCCTTGACCTATATTTTTGATGAGGAAACTCCAAGATGGCGTCAGCTCCTCTCTGAAC TTGGGTTATAG
Download CDS Sequence

Protein sequence (LotjaGi4g1v0352800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MSTMMSFQTCFRVKTTTCYASQRTAGEVLTANPSSRLSERQEVRLGLPSKGRMAADTLELLKNCQLSVKQVNPRQYVAQI PQISSLEVWFQRPSDIVRKLSSGDLDLGIVGLDTLREHGKDDPDLIVVHEALEYGDCRLSLAIPKYGIFENIHSLEELAK MSQWTEERPLRVATGFTYLGPKFVKDKGLKNVAFSTGDGALEAAPAMGTADAILDLVSSGITLKENNLKEIEGGVVLESQ AVLVASRKSMVQRKGVLETTHEMLERLEAHLRAIGQFTVTANMRGSSAEEVAERVLSQPSLSGLQGPTVSPVFCKRDGKV TADYYAIVICVPKKALYKSVQQLRAIGGSGVLISPLTYIFDEETPRWRQLLSELGL
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR21403:SF7
2 376 375 2.7E-201 –
PANTHER
PTHR21403
2 376 375 2.7E-201
IPR001348
CDD
cd13593
43 270 228 3.19305E-98 –
Gene3D
G3DSA:3.40.190.10
43 258 216 7.4E-59 –
SUPERFAMILY
SSF53850
43 270 228 8.29E-47 –
TIGRFAM
TIGR00070
43 245 203 3.7E-46
IPR013820
Pfam
PF01634
92 267 176 6.6E-37
IPR013820
Gene3D
G3DSA:3.40.190.10
135 239 105 7.4E-59 –
ProSitePatterns
PS01316
202 223 22 -
IPR018198
TIGRFAM
TIGR03455
257 359 103 8.1E-12
IPR013115
Pfam
PF08029
275 357 83 2.4E-16
IPR013115
SUPERFAMILY
SSF54913
277 359 83 5.34E-8
IPR011322

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0000105
Biological process Histidine biosynthetic process The chemical reactions and pathways resulting in the formation of histidine, 2-amino-3-(1H-imidazol-4-yl)propanoic acid.
Subterm of
GO:0000287
Molecular function Magnesium ion binding Interacting selectively and non-covalently with magnesium (Mg) ions.
Subterm of
GO:0003879
Molecular function ATP phosphoribosyltransferase activity Catalysis of the reaction: 1-(5-phospho-D-ribosyl)-ATP + diphosphate = ATP + 5-phospho-alpha-D-ribose 1-diphosphate.
Subterm of
GO:0005737
Cellular component Cytoplasm All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0352800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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