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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0357600 |
| Transcript ID | LotjaGi4g1v0357600.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Oxidoreductase, 2OG-Fe(II) oxygenase family protein; TAIR: AT1G14710.1 hydroxyproline-rich glycoprotein family protein; Swiss-Prot: sp|P89053|GB_RHCM6 Envelope glycoprotein B; TrEMBL-Plants: tr|A0A0B2R130|A0A0B2R130_GLYSO Uncharacterized protein; Found in the gene: LotjaGi4g1v0357600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:73621448..73627866) extracted from Lotus japonicus Gifu genome v1.2.
CGAATATTCGCTCCAAAATCCGAAATGAGCAGAGTCCCAAGTCCCAGATGAAAACACATACATACAGCAATGAGAAAGTG AGAGAGAGAGAGAGAGAGAGAGAGTTGTGTGTTGTGTGTCGTGACTTGTGAATGTGAGCCACCATTTATGACCATACATA CCATGGTTTACATAGGCATACCACATGCGTGCTGAATAAGCCATTCTTCCTTAACCCTAGCTTAGCTAACTACTACATTA CATTAGATCCTGTCTTCCTCTTCAACCCTTTGCTTTGCGTCACTCCAACTCAACCACATCTTCACTTTCCATAATCTCAT ACATCATTCACCACTTACCCTTTTCATTGCCAGATCTCTCCAATTCTCAACTTTTCACCCATCTGATCACTTTTTTTCAC AAAACCCATCTCAAATTCTCCATTTTTAGCTCCAGATCATTCTTGGGTATCCTTGTTTCCGACCAAGTTTGTTTCTTTTC TGCTTAATTCTTCTAAATTTTGCATTTTTTTAAGTGGGGTCCTCTTCAATTTTGCTGTTTTCTTCTGGTAATCTCGTTGT TTCTTTGTTTAGATCTAGTTCTGTAACTGGGGTATGCTTGCTTTGTATGCGGTTCTAGTCTTGTAGTGTATTGTTGGCAG TGACTAGTGAGTTCTCATGGCAATGCCATCAGGGAATGTGGTAGTGCAGGACAAAATGCAGTTTCCTAGTGGTGGTGGTG CTGGCAGTGGTGCTGGTAGTGAGATCCACCCGCACCACTACCGACAGCAGTGGTTTGTTGATGAGAGGGATGGGCTTATT GGTTGGCTGCGAAGCGAATTCGCAGCTGCCAATGCGATCATAGATTCCCTTTGTCATCATATGCGTGTGGTTGGTGACCC TGGGGAGTATGATGCTGTCATTGGGGCCATTCAGCAAAGGCGGTGTAATTGGAATCAGGTGCTGCTCATGCAGCAATACT TTTCTGTGGCTGAAGTGGTGTATGCGCTGCAGCAAGTGGCATGGAGGAAGCCGCAGAGGTATCTGGAACCAGTGAAAGTG GGTGCAAAGGATGTTAGGAAATCTGGTCCTGGATACCGGCAAGGGCAGAGGTTTGAGGCTCCAAAGCAAGCTTATAATTC TAGTACTGTGGAGTCTTATGGTCAGGAAGGGAATACTGTGGTTACTGGCGGTGCGGAGAAAGGGACTCCTGTAGCTGAGA AGACTGAACAACTTAATTCCGGGGGCGAGGTTGGGAAGATGGATGATAAGGGTTTAGCAACTGCTGAGGAAAAGAAAGGT AAATACTCAATCAATCAATCAGCCTGTTTGTATTATAATACTACACATTGAATCTAGCACCTCTGAGTGATTGTTGTTAT TACATCTTTTTGTGTTCATTTTAATCCAAATGGTATTTGCAATGCTGGGTAGGTACCTTTCTTCCTTGAAACTTTTATAG TATGGACTTAAAAGATTGAAATTCTGGCGCACTCAGGATAATTGATTGACTCAGCCTTGCTTTATACTAAATGTATAATG TATAATTTGAGGGCACCATTGTGATTTAGAAATAAGCAGTTTTATTCTCTTTGGCTTCTTATGGTGCTTGCTTTTGGCCT TTTGGATAGAGCCATACTGGTATGCTGAAATAATGGATATATCGACAGTGTTTTGTTGGGATTGATACCAACTATTTATA TGAAAATCAGCGGAGATAATCAGATCATTTTATGGATATCTTAGCATCTGATAAAGTAAGAATGCCGACTTGAATATGAC GAAAGTATGAATCTATTATTTACAAGTCATTACTTTTTGGGATATGATATCATGCTCCTTTTCACAATGAAAGCTATTCA TGAAAGACTCCAATTAATTCAGACTAAAAATTAAAATGGTTGACCTTCAATGTTAAAATTAAGGCCTCTTTTTTTGTATG ATAATTTGGCTCCTGCTATTTAATTAATGGTAAGGTGGGGGGGGGGGGTTAGCTCACATATGATTGACACACTACAAATG CCTACAGAGTACAGTCTAATGACTTGTTTGCTCTCCTGCTTGCTTGAGCAGATGCTCTAACAAAGCATCCAACTGATAGC AACTTGAAGAGCTCAGGGAGTTCTGAAGAATCTCTGTCCAACTCAGAATCTGAAGCTGCAGTTGCAACAGTTGTAAATGA TGGACGTGTGTCAAATTCTAAAGGTTTCTTCCTGTGCACCGTGATTTAAGTGATGATGTATATCTTATTTAACTTAGGGC AGTTGGCTATGCTAGTTGTGTGCATGAAGTTAGTAAATATTGTCATACTTTACACTGCCCCCCCCCCCCCCCCTCCTCTT GTTTTTATCACATGCTTGCATTTACTTATAAATTTGTGTGCCAAATAAAAAAATGTTAGGTCCTCACACTAGACCATAAA CACATAGTCACACTCACATCTCATGTATGATCAGGGTCGGTTATAAAATGCTGTATCAGCTTTTCGTTCATTATTTATTT ACCATTTAATTTTAAAGTTACCTCTTTTGCAATGTGTTTTCAGAGAATGATTCCCATTCTATGCAAAATCAAAATCAGAG CCCAAGTCTTTCAACTATGGCAAAAACGTTTATTGGCAATGAGATGTTTGATGGGAAGATGGTAGGGTCCTTTAAATATT TATTCACTTTTTTCTTGATGTCAATGTTCTAGATGTGTATATACCTTGTAATTTTTCCTATTTCTTCTATCTTTTATATT TTACATTTATGATGTACCTTTTTTATTTTTCATTTTTAGGTGAATGCGATTGATGGACTGAAGTTGTATGAAGGTTTAAT TGATGGAACTGAAGTTTCAAAACTTGTTTCATTGGTTAATGATCTAAGGGTCAGCGGAAAAAAAGGACAATTGCGAGGTA ACTGTATTATCTGTGTTATATACCTTCATGCTGGAAGATTCTTTCACTGCTTCCCTTTTTAAATTCACTTGGTTGATAGC AAATAGCTGTGGCCATATGCATGGCTGGTCCACTGCACATGCTCTTAAAGCCAGAGGTTTCTTTGGAAAAAGGCTGTTGA CTTGCGTCTATTTTTCTCTCTTTTTTCTCCATTTTATTAGTTGAATAGTCACGGATGAAGAACCAGGTGGCACTGTTTCT CAGTGACTAAAAACTGTAGAGTAGTACATGAGTCATGAGTTCTTATATAAGTTTGGTCATGGTAAGTTGTACTTATTGTT TTTGTACTTGTGATATTTGCCAAGTTGCGCAAGAATTTTGGTCTTGATCTTGTTATTTGTTTGGTTTATACTTCTGTTTT TTCCCCTATTGACCGTCACCACTCACCAGTCACCACCACTAGTGTAATGTTCGTAATGATAAAGTTATGGTAGAGCTGTT AGAACACATTAGAATACACGACGCTGGGCAACAAGTTTCATAAATGAGTAGTGACAAATGCGAAGAGAGAGAGAGAGAGA CAAAGAAAGATAAAAAATTATGCATACGACCCTATTTACTGTTTATTGGTCGATGCTCAATTTGATTGCAGGGCACGTGT AATACACACACACACACACACACACACATCTATATATATTTATATGGATGTTCAGTCTGACTGTAATATTTTATATCACC CTGCTGGAAAATAATTTATGCTTTGTTGTCTGGATTATGCAAACAACTTTTTTGATAAATACTTCTTGCTAAATATTTTT TACAAACAGGAAGTCAGACATACATAGTTTCGAAAAGGCCCATGAAAGGGCATGGAAGGGAGATGATTCAGTTAGGTGTT CCCATTGCTGATACACCTCCAGATGGGGAAAATATGACAGGAGCCTCCAAAGGCATGTTGTTTGATTTCTTTCTATACCA ATTTACTGTACTTTTCACATCTTTCTTATTTCCAGCCATGATATTTGACTTTTTCCACCCCTGTAGTAATAATGATTGTT TAAGTTCCATAAATTGAATCTGGCAGAGATGAATGTAGAATCTATTCCTTCCTTCTTTCAAGATATTATTGAGCGTATGG TTTCCTCACAAGTTATGACTGTGAAGCCTGATGCTTGCATTGTGGATTTCTATAATGAGGTTGATTCTTGTATTATTCTT ATTTTTTGTGAGGTTTTATATTGGCATAATTGGCTAAGTTAGTCTGGTTATTGCAATTGATTATAGGGCGATCACTCACA TCCCTACAATTGGCCACATTGGTATGGAAGGCCTGTCTATATCCTTTCCCTGACAGAATGTGATATGACTTTTGGAAGAG TAATTTCCTCAGACCATCCAGGGGATTACAGGGGCTCTCTGAAGCTTTCTCTTCTCCCTGGGTAATGCTTGCAGATCTTA TCTTTTACTGTTATAATGCATCTCATATATGTGTGTTAATATTATGATGCTGTCTTTGGTTTGTAGAAGCCATAAAATCA TGAGATTTCAATCAAGACCTGTCTATACTAAAAAATTAATAGAAGTCTAGTTGATGGTTAGACATAGTTTAGTCCATTAT ATGTTCTTCATGTTACCTGCATATTCATGGATACCTTTATGAATTTTGGTTTTTTTTCTTCCGTTCAAAATGAAAATATA GTGTATATCAACATCTTAGTTTTTGCATACACTGATTGGAAGCCTTTTTAACTGTTACTTATTATTCCAAGGAGCCCTCT TTATTGAATGAGCTTTTGTGGGTCTTTTAAGTTTTGGATCATTCATTTTCGTTGATTAGTCTCAGATTGACTAGAGATAT GGTCAAATAAGTTAAGTCCTTATAAAGGGTATAGCAACCCTCACCTCAAAAGCTAGCTTTTGGGGTAGAGTTAGGCCTAA CCCGAATTCTAATATGATATAGGGCCTATCCTAGTATCCTAGATCCGTTTATTGGGCTACCATATATGGACTACTCGCAT ATGTTCATTCCTGTAAATTCCACGCTCCAAATGTCCCGCCCTGTGTGTGATGAGAAGACCAAACAAGTCCTCATAAAGGG TAGAGCAACCCTCACCTCAGAGCTAGCTTTTGGGATAGAGTTAAGCCTAACCTGAATGATAAGAATTCTGTTCATGGAGA TGATTATTATTCAAAATAACTTCTATAGGGCATTCTGTCTTTTATTATTTATTATTATCTTAGCAAGTTTAGTCTCTTGC AGTATTATAGTGTGTTGTGTAGAGTTCACTATGCTAGGGGAGGGGAGTGCTGCTTGTTTTGATGTCTTACTTCAATCTGA AATTCCTCTACCCTTTGTTCAGATTCTAAATACTTTTATGCTTTGGCTGCTGTAGGTCTCTTCTGTCTATGCAAGGGAAA TCTACTAATTTTGCTAGATATGCTATTCCTTCTATCCGCAAACAACGCATACTTGTTATTTTTACAAAGTCCCAACCAAA GAAGTCACTGTCAAGTGATGCTCAACGTTTTACCTCATCAGCAGCATCTTCTCATTGGGGTCCACCGCCAAGCCGTTCCC CCAATCACGTTCGTCATCATTTAGGCCACAAGCATTATGCTTCAGCTCCAACAAACGGAGGACTGCCAGCTCCACCAATC CGGCCACAAATTCCTGCTCCAAATGGTATGCAGCCATTGTTCGTACCCGCACCAGTTGTGCCTCCGATGCCATTCCCTGC ACCTGTGCCAATCCCACCGGGTTCTGCAGGCTGGACCACAGCTCCTCCAAGGCACCCCCCTCCTCGGATCCTTGCTCCTG GCACAGGAGTCTTCCTACCTCCGCCCGGCTCAGGTAATTCATCTCAACCGTTACCAGGTACTTTGGCTGAAGTGAACCAC CAAACTGTGGAAACTCCAACCTTACAGGAAAAGGAAAATGGGAAGGCTAATCACATTGTTTCCCCAAAAGGGAAAAGGCA AGAATGCAATGGACATGGGGTCGATGGAACTCAAGTTGAACAAGGTGTAGGGACACTAAAGGATAGTGATGAGAAAGCTG CAGCAAGTCATTGAGCCTGTGCCAGGTGATGATATAGTTATAGAGAGGGAGAGAAAGAGAGCTAAAGCTTATCAAAGGAA AAAGGGTAGGCTGCGATGTTAACTTGAGTTTGAAGCAAATGTAAAGCGCGGCATGTCACATATACTCTGCAAAGGAGAGC AAGGGAAGTAGGCAGAACGTTTTGGTTCTGTTCAAAATCCTTTCTTTGCTCCAGTCCTTTTTTTGTTATCTTACTATATT AACTATTACAGTAAAGGAAACCCATTCTTATCATAATTTTTGCTTTTTTTTTATCTTATTATTATGATTATAAAATGCTT CTTACTGTGGATCATGATAATTTCATGTAGAAATTTCATGATATTTTCATGCTGTGTCTGTGTCTCTCATCATGTGTTAA ATGGGTGGGATGCTGTTAATATTGATCTTGTGGTAATGTGTCATCTGTGTTTTAATTTAACTTGATTTGTTAAATTAATG GCAAGTTGTATAGGATCAA
CDS sequence (LotjaGi4g1v0357600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAATGCCATCAGGGAATGTGGTAGTGCAGGACAAAATGCAGTTTCCTAGTGGTGGTGGTGCTGGCAGTGGTGCTGG TAGTGAGATCCACCCGCACCACTACCGACAGCAGTGGTTTGTTGATGAGAGGGATGGGCTTATTGGTTGGCTGCGAAGCG AATTCGCAGCTGCCAATGCGATCATAGATTCCCTTTGTCATCATATGCGTGTGGTTGGTGACCCTGGGGAGTATGATGCT GTCATTGGGGCCATTCAGCAAAGGCGGTGTAATTGGAATCAGGTGCTGCTCATGCAGCAATACTTTTCTGTGGCTGAAGT GGTGTATGCGCTGCAGCAAGTGGCATGGAGGAAGCCGCAGAGGTATCTGGAACCAGTGAAAGTGGGTGCAAAGGATGTTA GGAAATCTGGTCCTGGATACCGGCAAGGGCAGAGGTTTGAGGCTCCAAAGCAAGCTTATAATTCTAGTACTGTGGAGTCT TATGGTCAGGAAGGGAATACTGTGGTTACTGGCGGTGCGGAGAAAGGGACTCCTGTAGCTGAGAAGACTGAACAACTTAA TTCCGGGGGCGAGGTTGGGAAGATGGATGATAAGGGTTTAGCAACTGCTGAGGAAAAGAAAGATGCTCTAACAAAGCATC CAACTGATAGCAACTTGAAGAGCTCAGGGAGTTCTGAAGAATCTCTGTCCAACTCAGAATCTGAAGCTGCAGTTGCAACA GTTGTAAATGATGGACGTGTGTCAAATTCTAAAGAGAATGATTCCCATTCTATGCAAAATCAAAATCAGAGCCCAAGTCT TTCAACTATGGCAAAAACGTTTATTGGCAATGAGATGTTTGATGGGAAGATGGTGAATGCGATTGATGGACTGAAGTTGT ATGAAGGTTTAATTGATGGAACTGAAGTTTCAAAACTTGTTTCATTGGTTAATGATCTAAGGGTCAGCGGAAAAAAAGGA CAATTGCGAGGAAGTCAGACATACATAGTTTCGAAAAGGCCCATGAAAGGGCATGGAAGGGAGATGATTCAGTTAGGTGT TCCCATTGCTGATACACCTCCAGATGGGGAAAATATGACAGGAGCCTCCAAAGGCATGTTGTTTGATTTCTTTCTATACC AATTTACTGTACTTTTCACATCTTTCTTATTTCCAGCCATGATATTTGACTTTTTCCACCCCTGTAGTAATAATGATTGT TTAAGTTCCATAAATTGA
Protein sequence (LotjaGi4g1v0357600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAMPSGNVVVQDKMQFPSGGGAGSGAGSEIHPHHYRQQWFVDERDGLIGWLRSEFAAANAIIDSLCHHMRVVGDPGEYDA VIGAIQQRRCNWNQVLLMQQYFSVAEVVYALQQVAWRKPQRYLEPVKVGAKDVRKSGPGYRQGQRFEAPKQAYNSSTVES YGQEGNTVVTGGAEKGTPVAEKTEQLNSGGEVGKMDDKGLATAEEKKDALTKHPTDSNLKSSGSSEESLSNSESEAAVAT VVNDGRVSNSKENDSHSMQNQNQSPSLSTMAKTFIGNEMFDGKMVNAIDGLKLYEGLIDGTEVSKLVSLVNDLRVSGKKG QLRGSQTYIVSKRPMKGHGREMIQLGVPIADTPPDGENMTGASKGMLFDFFLYQFTVLFTSFLFPAMIFDFFHPCSNNDC LSSIN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 369 | 369 | - | – | |
| PANTHER | 4 | 364 | 361 | 8.8E-121 | – | |
| PANTHER | 4 | 364 | 361 | 8.8E-121 | – | |
| MobiDBLite | 133 | 267 | 135 | - | – | |
| MobiDBLite | 148 | 167 | 20 | - | – | |
| MobiDBLite | 197 | 214 | 18 | - | – | |
| MobiDBLite | 215 | 267 | 53 | - | – | |
| Gene3D | 275 | 376 | 102 | 1.3E-9 | ||
| TMHMM | 370 | 392 | 23 | - | – | |
| Phobius | 370 | 392 | 23 | - | – | |
| Phobius | 393 | 405 | 13 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0357600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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