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LotjaGi4g1v0358600.1

Overview

Field Value
Gene ID LotjaGi4g1v0358600
Transcript ID LotjaGi4g1v0358600.1
Lotus japonicus genome version Gifu v1.2
Description Receptor-like kinase; TAIR: AT1G70740.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q8GYA4|CRK10_ARATH Cysteine-rich receptor-like protein kinase 10; TrEMBL-Plants: tr|I1KRS6|I1KRS6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0358600
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr4:73723647..73728134) extracted from Lotus japonicus Gifu genome v1.2.

GATATGGAAATCCCCCTAATCTCAAACACCTCTTTTATCCTGCATATTTTCATAACCATAATACAAAATTAAGGTTTTTC TTTTTTATTTCTTAGTGTCTACTGTCTAGATGTGCCAAAAAAGTTTCTTTGTGTGCAGTAAAAGAATAGGATGGTTGCCA AGTCAAGCAGGGGTCAGTAGGTCAACAAGACCAACACGTTTCATATTTCTAGTATTTGATTTGATTTTCCAGATATTCTA TTCTATGTTACCTTATGATATTGTTTTCTCTTTGCTTATTGCTTATCAAACAAACAAAATCTCACTTTCTCTGCTTCATC TCTCATTTCCCCCAAAAATCCACTTTCAATTCCCAAAAAAGATCACAAACTTTGCTTCAACAATCCTTCTTTTTCTTTCT GTTTCTCTTCCATGGGCTGGTTCTGCTCTTTGAACTGGAAACTGTAGACAGACACCGCCATGGAAAAATCCAAAAGCTTT CTCCATAGTCTTGCTAATCACTTCAAATTTGGTTCCAACAGAGGTAATCCAACAATACCCTGAATTTTATTTTCTGGTTG ATGAGGTTGTTGAGTTGTCTGAATATAGTTAGCAGGGTTCTCAGTTCTGTTTTTCTCTGTTTCTGTTCTGTTTTGTGTTT GATCAGAGCGAAGCAATGAAGCTGACATTCAGAGAATAACTGCACAGGAGCAGAAGATCTTTGCCTATGACACCTTGCTT GCTGCCACCAAGAATTTTAACCCTGTTCATAAGCTAGGTGAGGGAGGTTTTGGTCCTGTTTTCAAGGTAAAATAAAATCA ATCAGCAATTTTCATAGTTTACATGTTTTCTGAAAATGAATTTTCATGATGTTGAACTCTAGAAAGCTCTCTCTTCCAAA TGAACTCAAGAACTTGATTACTTTTCCACTTGGTCCCCCCACCACCTGGCAGAAAAGTCCTCAAAAGTAAAAAATTGATG CCTTTTTGGTTTTACTTGATTAACAAAAAAACTCTAGATGTAATATAATAAGTGAGTGGGATTTGGTTTCTGATTTGCAC CCTTTTTCACTTTCAGGGGAAGTTGAGTGATGGTAGAGAAATTGCAGTGAAGAAGTTATCTCTCACATCAAAGCAAGGGA AGAAGGAGTTCATCAATGAGGCCAAGTTGTTGGCTCGTGTGCAGCATCGGAATGTGGTGAATTTATGGGGTTACTGCGTC TATGGTGCAGAAAAGCTGCTTGTTTATGAGTATGTGCCTCATGAGAGCCTTGACAAACTTCTATTCAGTGAGTGCTTCTT TATTCTATTCAATAAAATCATAGATTAGTGGAAGCCACTTACATACTTTAAGAAGTTCCTGCTTTAATTATGATTTTCTT TTTCTAAACCATGCTTTGAGTTAGTTAAGCACATACCTTTAAAAAAATATATATGGCCTGCAGGAAATAAAATTGATGAT AATTATTCGTCAAACATGTTTGAATCAACTTCTCTTTTCTCGGAATCAATTCTAATACCCAGAAGTTACTCACTGATCCT TTTCCCAAGATTGATTTTGAATTCAGAATCAATTTTAGAAGAATTGTGATGAAATCTTTAATGTTCTAGCTAATTCTTTT CCATGTCTAATATTTAGAACCCTAACAGCTTGAATTTGAATTATGAGGTTTTCAACTTTAACTTTATCATCTCTCCTAAG ACCGTGAACCACCATCCTTTCTCCAGATATAAAATTGTTTTCTTTGTCTTGACTCCAGAAGGAGATCAGCCTCTGAAAGA GACTGCACTTTAGACCCTTGACCTTAACAAATATAAAATTATAATTCATTTACTGGTTCCATTGGATGCGTAGACTAGAC AACTTCATATTTACAATCAGAACTCCTCATCTTATATCCATCTTAGCAAAGCAGTGACGCCTTCTGTTGGAATAACAATC CTACCATTTTTTATTTTCCTTGTCAATTAAGCACATGGACTAGTTAATAAATAAAAAGTAGTGGGGTCTTAGAACCAAAA ATTCAAGTTTGGAGAATGATTCTACTTCCTAAATTGTCCTTTTTTATATTTCTTTGTTATCGTGGAATAGCCACTAATTC CACTATTTAATGGAGGTATGATAGTTATGTGAGGCATCTTGTTTTTATCATAAACAACTAATGCTACTGACACAATTGAT AGAAGAACTCATTATTCTCTCATACTCACCAAAAGAAAGTAAATTCACGGATCAATCCTTCAAAATGTTAAAGATCACAC AAACTTATCATATTTAAATTTTGTATCTATCTCTCTTCATACCTAGTGCATGCACTGAATAGGTGAGATCTTGTGAACAT TTATGAAAGAGTGAAATAGACACATATTTGAATATGACAACATTGTGAAATGAGAAATCCATTGCTACTCGTATAAGCTT CTCGTCATAATTGATTCTAATTTTAGAATCAACAGCAGAAGAAATTTCAAACATGCACTTTTTCGTGGGTGGCGTTGCTC TTTTTTATGACAGTAAGTTTATAATGGATGGTTGCAGATCCTCATAAGAGAGAGCAGCTAGATTGGAAACGCAGGTTTGG CATAATCACGGGTGTAGCGAAAGGCTTGCTCTATCTCCATGAAGATTCGCATGATTGCATCATCCATCGTGACATAAAAG CTAGTAACATATTGCTTGATGATAAATGGACACCCAAGATTGCTGACTTTGGCATGGCCCGTCTCTTCCCTGAAGATCAA ACCCAGGTCAATACACGTGTGGCTGGAACCAAGTAAGTAAAATAGTTCCTTTTTTTTTGTGTGCCAACAAATAGTTTGAT AGAGCGCCCTAATTTTTGTTCATACTAAAAATGCTTTAGAACTATACAGTGGGTACATGGCACCAGAGTATATGATGCAT GGAAAGCTCTCTGTGAAGGCAGACGTGTTCAGTTACGGGGTTTTGGTGTTGGAGTTGATCACCGGACAGCGAAACTCATC GTTTAATTTGGACGTGGACGCACTGAGTCTTCTCGACTGGGTAACATTTTTTAATCTCAAACAAATGCACTCTTATTCAT ATAAAACATTCTTAACTAAGGATGCTTTGTGCTAATTGTTTTCTATCTCTTGTTGATGATTATAGGCATACAAGATGTAC AAGAAAGGGAAGAGCTTAGACATTGTAGACCCTTCATTAGCATCAACGATGGAAGCAGAGCAAGTATCAACATGTATTCA GCTGGCTCTGCTGTGCACTCAGGGCGATCCACAGCTACGCCCGACAATGAGGCGTGTGGTGGTGATGCTGTCAAGGAAGC CAGGCCACAACCACGTGGAAGAACCGACGAGACCGGGAGTGCCCGGTAGCCGGTATAGAAGACCTCGCCGGCACTCAGCG TTGTCTTCCACCGGTGGTACCTCTGGTTCACACTCTTCTGACTCAAGCTACAATAGTACCTCTGGTACTGTTACTGCAAC GGGAACAAGCTCAGCCACTGCAAATATAGTAGACTCAAGAGGTAAAAGTCCAATTCTGGGTTAGGAAGGTTCATTATGTT TTGCCACGTGATGAGGCTTGTTTATTCTTTTTGTAATGTAATTTATATAAGTATGTGATTTGAACTGATTAGAGTGTAGA TATGAAGAGGGTTAGGTTAGGAATGGCCACATTGTAAGAGGTCGAGTCTTATTCAGTTATTCTTTAATATTTTTAACAGA AAAATGAGTTGAAATTCTTCTAATCTCAATTCTCAAGTGAGTCATGTCATCTTTCTTCAACAAAATTCTAGTGATAAGGA AAAGTTTCTATTACCTATACTCTAAAAGAATACTAAGTTTCTAGCATACATAAACACACTTCACAATTTTATTATCCAAA GTTAATATAAGTCAAAATGCAAATGACATGTTATTTGCAACTTTATCATACTTTATGACTAGCTATGTTAAAATGTATTC TGTAAAACAATATGGGATAAACATACTTCTTCATCTCATCTATCTTCTTGATATATTCTAGCTCTGCTTCTTCAGTACTA GTAACATTGAATAAATAGAAAGGCTTTCATTTACAACAATATCACCATATCCAGATCGAGTAGCTTCATTTTCAGTGATT ACCTATGAATCATATCATCAGTAATACAATCAAGTGAAGTGAACCATTTCAACTCAGCATCCACAGTGAACGCTGTCAAA TTCATTGCCTCATTGCCAAAAGGATTGATTATTCATACAAATTTTTCTTTTTTCGCAACAAGAGACAACCAAGTGCATAT GCATGAGAATAGTGCATTCCCTTTCCTACAATCACTAGAAAAGAGACGAGGCTAGTTAAAATGTTCTAAAAGAAAATATA CCTCGACTTTAATTCCCTTTCCTTACTTTCATGCCCGATCCATTAAGTTAGTTCCAACTTCCTTGCCATCATTGAGCATC CCCTTATAAACAATTCCAAAGCCATCATGGCCAATCACAATTTTTGACTTTTTGAGTAGTCCAAGTCAAACATTTTAACT TTTTTTTT
Download Genomic Sequence

CDS sequence (LotjaGi4g1v0358600.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGAAAAATCCAAAAGCTTTCTCCATAGTCTTGCTAATCACTTCAAATTTGGTTCCAACAGAGAGCGAAGCAATGAAGC TGACATTCAGAGAATAACTGCACAGGAGCAGAAGATCTTTGCCTATGACACCTTGCTTGCTGCCACCAAGAATTTTAACC CTGTTCATAAGCTAGGTGAGGGAGGTTTTGGTCCTGTTTTCAAGGGGAAGTTGAGTGATGGTAGAGAAATTGCAGTGAAG AAGTTATCTCTCACATCAAAGCAAGGGAAGAAGGAGTTCATCAATGAGGCCAAGTTGTTGGCTCGTGTGCAGCATCGGAA TGTGGTGAATTTATGGGGTTACTGCGTCTATGGTGCAGAAAAGCTGCTTGTTTATGAGTATGTGCCTCATGAGAGCCTTG ACAAACTTCTATTCAATCCTCATAAGAGAGAGCAGCTAGATTGGAAACGCAGGTTTGGCATAATCACGGGTGTAGCGAAA GGCTTGCTCTATCTCCATGAAGATTCGCATGATTGCATCATCCATCGTGACATAAAAGCTAGTAACATATTGCTTGATGA TAAATGGACACCCAAGATTGCTGACTTTGGCATGGCCCGTCTCTTCCCTGAAGATCAAACCCAGGTCAATACACGTGTGG CTGGAACCAATGGGTACATGGCACCAGAGTATATGATGCATGGAAAGCTCTCTGTGAAGGCAGACGTGTTCAGTTACGGG GTTTTGGTGTTGGAGTTGATCACCGGACAGCGAAACTCATCGTTTAATTTGGACGTGGACGCACTGAGTCTTCTCGACTG GGCATACAAGATGTACAAGAAAGGGAAGAGCTTAGACATTGTAGACCCTTCATTAGCATCAACGATGGAAGCAGAGCAAG TATCAACATGTATTCAGCTGGCTCTGCTGTGCACTCAGGGCGATCCACAGCTACGCCCGACAATGAGGCGTGTGGTGGTG ATGCTGTCAAGGAAGCCAGGCCACAACCACGTGGAAGAACCGACGAGACCGGGAGTGCCCGGTAGCCGGTATAGAAGACC TCGCCGGCACTCAGCGTTGTCTTCCACCGGTGGTACCTCTGGTTCACACTCTTCTGACTCAAGCTACAATAGTACCTCTG GTACTGTTACTGCAACGGGAACAAGCTCAGCCACTGCAAATATAGTAGACTCAAGAGGTAAAAGTCCAATTCTGGGTTAG
Download CDS Sequence

Protein sequence (LotjaGi4g1v0358600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MEKSKSFLHSLANHFKFGSNRERSNEADIQRITAQEQKIFAYDTLLAATKNFNPVHKLGEGGFGPVFKGKLSDGREIAVK KLSLTSKQGKKEFINEAKLLARVQHRNVVNLWGYCVYGAEKLLVYEYVPHESLDKLLFNPHKREQLDWKRRFGIITGVAK GLLYLHEDSHDCIIHRDIKASNILLDDKWTPKIADFGMARLFPEDQTQVNTRVAGTNGYMAPEYMMHGKLSVKADVFSYG VLVLELITGQRNSSFNLDVDALSLLDWAYKMYKKGKSLDIVDPSLASTMEAEQVSTCIQLALLCTQGDPQLRPTMRRVVV MLSRKPGHNHVEEPTRPGVPGSRYRRPRRHSALSSTGGTSGSHSSDSSYNSTSGTVTATGTSSATANIVDSRGKSPILG
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Gene3D
G3DSA:3.30.200.20
14 127 114 1.0E-35 –
PANTHER
PTHR27006
18 385 368 6.3E-139 –
PANTHER
PTHR27006:SF105
18 385 368 6.3E-139 –
SUPERFAMILY
SSF56112
37 327 291 3.37E-82
IPR011009
SMART
SM00220
52 322 271 3.0E-31
IPR000719
ProSiteProfiles
PS50011
52 331 280 38.322
IPR000719
Pfam
PF00069
54 319 266 7.1E-50
IPR000719
CDD
cd14066
58 324 267 7.53114E-101 –
Gene3D
G3DSA:1.10.510.10
128 335 208 2.8E-61 –
ProSitePatterns
PS00108
173 185 13 -
IPR008271
MobiDBLite
mobidb-lite
323 399 77 - –
MobiDBLite
mobidb-lite
352 390 39 - –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0358600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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