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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0360600 |
| Transcript ID | LotjaGi4g1v0360600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Leucine-rich repeat receptor-like protein kinase family protein, putative; TAIR: AT2G42800.1 receptor like protein 29; Swiss-Prot: sp|Q5PP26|PII2_ARATH Piriformospora indica-insensitive protein 2; TrEMBL-Plants: tr|K7L5S7|K7L5S7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0360600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:73931561..73933018) extracted from Lotus japonicus Gifu genome v1.2.
AAGCAATTTACACAGGGGCCACATGGTAATGGAAGAGGAGGAATTGTTGGGATTGTTTGAAGTGATGGATGCTCTTCTAG AAGACCCTGATTGGGCCCATGCCCATCCACAGCCATGTACAGAAACTCCATGGTCAGGTATTGAATGTGAAGTTAGCAAT AATCCACCAATCTTTCATGTCACAAAGATTCACATTGGTCCTGATATACTCTTCCCACCTTGCAAAACCTCTGCACACCT CTCAGAGTCCATGTCAAAACTCAAATACTTGAAAACCCTTTCAATTTTGAACTGTTTTGTTGCTTCACCAGTCACTCTAC CCAAAACCCTCTTTGGTCCTTTCTCTTCCTTAGAACATTTAGCTTTGGTGTCTAATCCAACCCTCTATGGAGAAATACCT CCTAGTTTGGGAAATGTTACTAGTCTTAAGGTTCTGACCCTGTCCCAGAACAGTTTACAGGGAAAAATCCCAAGCCAAAT TGGTGGTTTGGTTTTTCTGGAGCAACTTGACCTTAGTTATAACAACTTGAGTGGTCCAATTCCTAATGAAATTGGAGGTA TGAAAAGCATAACCATTTTGGACCTAAGTTGTAATGCAATTGAAGGGGTTCTTTTTCCTTCCACTCTTGGACAACTTCAA CTTCTCCAGAAGATGGATTTGCATTCTAACAGGCTTATTGGGAACTTACCACCTGATTTTGGAAATCTCAAGAGGTTAGT CTTGCTTGATCTGAGTCATAATTTTATTAGTGGGCCTATTCCTGAAAACTTGTCAAGTTTGAAACTTTTGGAATATTTTC TCATTGATGACAACCCCATTAAAGGAGGGATACCTCAGTTCATAGGGAAGCTTAGAAAGCTTAAATTAGTGAGCTTATCA GGGTGTGGATTGATAGGGGCCATACCCAATTTTTTCTCTTCCTTGATGAACCTTACAGCTATCTCCTTAGATAACAACAA TCTCTCTGGACCTGTTCCTCCAAATTTGGGTTCACTGCCAAACTTGGATCAACTTAATATCAGCCACAACAGGCTAAGAG GTGTTCTGGAGCTTCCTGAAGACTTCATTGGGAAGTTAGGTAAGAGGTTGGATTTAAGAGGGAACAGTGAGCTTTGCTTC AGTGATGAGGCAAGCAGGAAAAAGAACCTCTCTTCAGACTTGGAAATACCATATTGTTTGAACATGAGAAAGAGCAATGA CAACCCTCTTGAACACCCTTCAGGAACAAAGCCATCAAGGTATTATCATAGCAACATGAGTTCATGTTTGTCATGGCTGG ATGATCTACAAGTCATCTTATTTGCCTTGGTTTTAAACTTGGTGATCTGAGTTCTGAATCTGAATTTCATTTTGTAACAA TTGAAATTGATTTTACCTAAATGCTAGACTCATTCATAGTGTGCATGTTCTGATACAAACAGTGAAGTCAAAATCAATGT GGAGAAATGTTATTTTGC
CDS sequence (LotjaGi4g1v0360600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTAATGGAAGAGGAGGAATTGTTGGGATTGTTTGAAGTGATGGATGCTCTTCTAGAAGACCCTGATTGGGCCCATGC CCATCCACAGCCATGTACAGAAACTCCATGGTCAGGTATTGAATGTGAAGTTAGCAATAATCCACCAATCTTTCATGTCA CAAAGATTCACATTGGTCCTGATATACTCTTCCCACCTTGCAAAACCTCTGCACACCTCTCAGAGTCCATGTCAAAACTC AAATACTTGAAAACCCTTTCAATTTTGAACTGTTTTGTTGCTTCACCAGTCACTCTACCCAAAACCCTCTTTGGTCCTTT CTCTTCCTTAGAACATTTAGCTTTGGTGTCTAATCCAACCCTCTATGGAGAAATACCTCCTAGTTTGGGAAATGTTACTA GTCTTAAGGTTCTGACCCTGTCCCAGAACAGTTTACAGGGAAAAATCCCAAGCCAAATTGGTGGTTTGGTTTTTCTGGAG CAACTTGACCTTAGTTATAACAACTTGAGTGGTCCAATTCCTAATGAAATTGGAGGTATGAAAAGCATAACCATTTTGGA CCTAAGTTGTAATGCAATTGAAGGGGTTCTTTTTCCTTCCACTCTTGGACAACTTCAACTTCTCCAGAAGATGGATTTGC ATTCTAACAGGCTTATTGGGAACTTACCACCTGATTTTGGAAATCTCAAGAGGTTAGTCTTGCTTGATCTGAGTCATAAT TTTATTAGTGGGCCTATTCCTGAAAACTTGTCAAGTTTGAAACTTTTGGAATATTTTCTCATTGATGACAACCCCATTAA AGGAGGGATACCTCAGTTCATAGGGAAGCTTAGAAAGCTTAAATTAGTGAGCTTATCAGGGTGTGGATTGATAGGGGCCA TACCCAATTTTTTCTCTTCCTTGATGAACCTTACAGCTATCTCCTTAGATAACAACAATCTCTCTGGACCTGTTCCTCCA AATTTGGGTTCACTGCCAAACTTGGATCAACTTAATATCAGCCACAACAGGCTAAGAGGTGTTCTGGAGCTTCCTGAAGA CTTCATTGGGAAGTTAGGTAAGAGGTTGGATTTAAGAGGGAACAGTGAGCTTTGCTTCAGTGATGAGGCAAGCAGGAAAA AGAACCTCTCTTCAGACTTGGAAATACCATATTGTTTGAACATGAGAAAGAGCAATGACAACCCTCTTGAACACCCTTCA GGAACAAAGCCATCAAGGTATTATCATAGCAACATGAGTTCATGTTTGTCATGGCTGGATGATCTACAAGTCATCTTATT TGCCTTGGTTTTAAACTTGGTGATCTGA
Protein sequence (LotjaGi4g1v0360600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVMEEEELLGLFEVMDALLEDPDWAHAHPQPCTETPWSGIECEVSNNPPIFHVTKIHIGPDILFPPCKTSAHLSESMSKL KYLKTLSILNCFVASPVTLPKTLFGPFSSLEHLALVSNPTLYGEIPPSLGNVTSLKVLTLSQNSLQGKIPSQIGGLVFLE QLDLSYNNLSGPIPNEIGGMKSITILDLSCNAIEGVLFPSTLGQLQLLQKMDLHSNRLIGNLPPDFGNLKRLVLLDLSHN FISGPIPENLSSLKLLEYFLIDDNPIKGGIPQFIGKLRKLKLVSLSGCGLIGAIPNFFSSLMNLTAISLDNNNLSGPVPP NLGSLPNLDQLNISHNRLRGVLELPEDFIGKLGKRLDLRGNSELCFSDEASRKKNLSSDLEIPYCLNMRKSNDNPLEHPS GTKPSRYYHSNMSSCLSWLDDLQVILFALVLNLVI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 5 | 174 | 170 | 7.2E-30 | ||
| PANTHER | 8 | 395 | 388 | 9.9E-165 | – | |
| PANTHER | 8 | 395 | 388 | 9.9E-165 | – | |
| SUPERFAMILY | 70 | 365 | 296 | 2.72E-57 | – | |
| Pfam | 109 | 169 | 61 | 2.1E-6 | ||
| SMART | 132 | 155 | 24 | 260.0 | ||
| SMART | 156 | 180 | 25 | 39.0 | ||
| PRINTS | 159 | 172 | 14 | 7.5E-6 | – | |
| Gene3D | 175 | 268 | 94 | 5.5E-26 | ||
| SMART | 205 | 228 | 24 | 110.0 | ||
| SMART | 229 | 253 | 25 | 87.0 | ||
| Gene3D | 269 | 375 | 107 | 8.2E-20 | ||
| Pfam | 278 | 338 | 61 | 1.3E-6 | ||
| PRINTS | 325 | 338 | 14 | 7.5E-6 | – | |
| SMART | 325 | 350 | 26 | 56.0 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi4g1v0360600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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