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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0374500 |
| Transcript ID | LotjaGi4g1v0374500.2 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Serine/threonine-protein phosphatase; TAIR: AT2G42500.1 protein phosphatase 2A-3; Swiss-Prot: sp|Q06009|PP2A_MEDSA Serine/threonine-protein phosphatase PP2A catalytic subunit; TrEMBL-Plants: tr|W9REL2|W9REL2_9ROSA Serine/threonine-protein phosphatase; Found in the gene: LotjaGi4g1v0374500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:75376609..75381086) extracted from Lotus japonicus Gifu genome v1.2.
CTAACAAATAAGATTCCATCAGGTTTGTTTTATTTTTTCCAATCAATTTTTTGGCTCAACACATTTTTTTAAGTAAGAAA AAAGATTGGGCTTCTATTTTTCTTTCTCATGGCCCAATTAGCAGCAAATTGGCGAGAACAGAATTCAGTCTAGTGTCTGG AAAAACAGTTTGTTAGTCTAGTATAGTTGTTCTTTTAATATTGTATTCCGTTTGATTTTCTTTCCTTCCTAAATAAGCCT TTTGCCATTAATAGTGTGGTTCTTTTTCATTTAGTGATCCAACTCCTATTTCACAATTACATTTATTTATGCAGGTAAGG GTCTTGTGTGAGAAGGCAAAGGAGATTTTAATGGAAGAGAGCAATGTCCAGGTATGTTTGTCCAATGCCTATCTGTCAAG TTTTTATCGACTGTCTGGCTTTGCTGGGCATTCCGTTTTTACTGATTTTTACTTTGTTAAGTGTATTAAATAGGGCTTAA CTTATGATGGTTTTGAATGACTGAAAAAGCTAAAAAGGTTACTTTATTTGGCAACATTTGCAGCCTGTAAAAAGTCCTGT TACAATTTGTGGTGATATTCATGGCCAATTTCATGATCTTGCAGAGCTTTTTCGCATTGGAGGGAAGGTATTTTTTCTGA TAGTAGATTTTATAGTCAGCATGTATTTAATAAATTTGTGAAGCTACCGAAACTTAATATGCTTAAACTAAATAATACTT GAAAGTTGGAAAATCAGGAAATCCCATGCACCTTCATTTAAGTATTGAAAAATCAGATTTGAGTTATTTTCTGATTTTAG AGTAGTAGGGCCTTCTCTAAAATTTCATGACAGTGTAGTCCTCTCAATATTGCTAGTAACTAAGCAATTTCGCAAATTTG TTATCTGCAATAAATTAAAAATGTCTTTCCAGATTACCCTTGTAGTGTAAAACTTACTGGATAGACACTTACACATACAT GAAAAAGGGGGGTTGTACTTTTGCTTGAGTTCTATTGGTGCAATTGTCTTGCAAGAAGAAATTATATGATACGTAAAGGG GAAGCCTGGTGTTCAATCATATGGCATAAAAGTTTATTTTTTTGAGGGACCTTTTCTATTTTTGGTTATTTGGATCAGGA ATATAATGTATTTTTAGTATTTTTGATTCCTCTGACCCTGGGTTCAGGCAGATCTAATCATAAATTTCTAAAGCAGCTTC TCAGGAAGTCTCACTTTTAATTCAGGAACAGCATTTAGCCTTGACGACCCATAAGAAGCCTTACATACTCAGTCTCTCTT CCTTAGCCTTATTATAAATTTGAGATTTTTTTTTTAAAATTTTAGAATTGTCTCTCGTACTTACATACTTGCGTATTTAT GAAGTCTGGTGATTGAATACTTATTTCTGGTTACAACTTTTTGTCGGCAGTGTCCAGATACAAATTACTTGTTTATGGGA GATTATGTTGACCGTGGCTATTATTCTGTCGAAACCGTAACGGTAAATATGAACTGCATACTTTTCCTTTTCTTAGTATT TCAAACTCTTGGTGGGTTTATTTCATTAGGGTGTTTCAGTAAAACCTCATTTGGTCTTAGAAGAGACCATGCTACATTTG TATATTTTGCATCAGTAGTTTGATATCTGCTTTAGAAGAGTTTAAAATTACTTAGTTCATTAGTTCAATTACAGTTGTGT TCAGCCTTGAAAAATTCTGTTTTCCAGATTGTCATTCTAAAATTTCTTATGGCATACCTGTGCAGTGAGGATGATGGATT ATCATTTGTTCGTGCAATAGGCCTTGTTTGTGGCAATTGTTGCATTTATTTGTGTTCACTATATAATTGAAGTATTTGTT GTTGTGCCCAACCTGCTATCCAGAAAGTAAAGCGAGTATATGATGTTGCCGCATATGTAATAATGCATTATATCTATAGA ACATGTGGGGTTATGATTTTGTGGTACAAGCTTATGACTTTTATTTTATTAATTGCATGTTTGGATTGTGTTTATTTTGC TTTGAAGTGATATTTCTTTTGTAAGTAACATTTTTGGCACTAATTAAGTTATAATAATGCAGCTTTTGGTTGCCCTTAAA GTGCGTTATCGGCAGCGCATCACTATTCTAAGGGGGAATCATGAAAGCCGACAGGTTTGTTCTAGTTTTTATCATGTGAC ATTTCTGACAGTTGGGAATTGAATGAGATGAAAATCTTATTTTGGTCCTCGGAGAATAGTCGGTATCAATTTAGTTCTGG AGAAACTTTTTCTCAGTTACTGCCTGAAAGTCTTTATTGCTACCAATTGAATGCTTTCACCCTTCAGAAGGAAATAATGT ACCATTGAGTACACAATTGGTGCCTGCTCTATCTGAGGACCAAAATTTGCTTTTCTTAAAGAATGGTACCAGGGGATTTG ATTAAGTAATTGTAATGTTCAGAGCTTTATACTTCTAAATGACTATGTTAGACTGAAATGCAGAGTACAACTTGACTTGC TTGTTTGTTTAGTTGCTCTTGTATGGATTATTTTTGAATAGTAATGGCTGATCTTAACTTTCTGCTGCAGATTACTCAAG TTTATGGGTTTTATGATGAGTGCCTAAGGAAGTAAGTACCTGTTAAATCCATTTTTTAAATGACATCTTTGTACAGTAAC TTTGATATTGGCTATCATTGTCTTCAGTTTGACACAATCTTTTCCTTTATCCCTACTATCATTAATGTGTATTCTTCTCT TTTTGTTATATTTTTCGGATTTAATTTAATGGGTTTTTTGGTGATGAAAATGATAAATAGTTCTCTCATTCTCTGGTTGG CGGCTTTTTTGTAGAGATAATTTTTTTTTTGTTTTTGCAATCCTGTATCAGTGAATATATGAACTTGTGCAATCCTGTAT CAGTGAATATTTTCATATTTTGATTTGCAGATATGGCAATGCTAATGTTTGGAAGATCTTCACTGATTTATTCGACTACT TTCCGTTGACAGCATTGGTTAGTATCCTTTACATAATTTTGTAAAGCACTGCAAGATATTCTGTTTTTGCCTCTGATTGG ATTTATTAGTATGTTGGTTAGGTTGTTATGATTCTTAGCTCCACGTTGTACATATTGATCCTAGGAGTCTTAAATTTGTA GGCTTATTTTGAGTTATATCTAGTTACCTGCTGTATCTCTTATTTCCTTTCTGAAAAAAATATGCTCATGGTGCTAGCTC TTATTATCTTGCTCTATAAACTTATTGATATGTTGCCAACTTGATTGCAGCTCACATAGTTCACTGAGGTTTCCACGTTT TTTATAGGAATAAGTCCTAATTAAGAAGTTCTATGAGAGGTGTAGGAGAGCTCTACAGGAGCGTAACCCATAGGAGTCAT TTTCATTGCACAACTAACTAACCAACATATAGGCCGATAGAAAAGCTAACCAACATAGAGTGAGTTAGTAGTTACAAATG AAGATATTTAGTTGGAGTAATATAAAAGTAGGGGATACTGGATAGTAGTGCTTATGAGGGTATGCAGCAGATTGTAATTC AGAATTAGTAGAGAGTTGAGTAAATTCTTAGCAACCTTTTATATCTCTTAGCTCTATTTCGGTATTTCCTGAAGTAGTCC ACATTGGGCAGGTTGGGGAATTAGGGTTCTGCATCAATAATACATTAAATTTCTTCAATACTTCCACTTTCTGGGTACTG AAATCCTATCAGTTTTCAATAATTTAATGTTACTGAAGTGATGTATTCTCTTTTGAAGGTCGAATCTGAAATATTTTGTC TTCATGGTGGGCTGTCCCCATCTATTGAAACCCTTGATAACATTCGTAATTTTGATCGTGTACAAGAAGTTCCTCATGAG GGGCCCATGTGTGATCTTCTCTGGTCTGATCCGGATGATCGCTGTGGCTGGGGTATCTCTCCTAGGGGTGCTGGGTATAC CTTTGGCCAGGTAATCTAGTTTGTTGTGCATCAAGCTTGTACGTTTCTTGTAATCTTTGTCAATTGCTTATGCATGTTAC TTTTATAGGACATATCTGAGCAATTTAACCATACCAATAACTTGAAGCTGATTGCTAGAGCTCACCAGCTGGTTATGGAA GGATATAACTGGGGTCATGTAAGTATTTGATCTCATATTGTTTGTTTTATTTTCATACATGAGTACATAGCTAATTCATA GGGTCTTCTTGCAGGATCAAAAGGTGGTAACCATATTTAGTGCACCTAATTATTGCTATCGCTGTGGGAACATGGCATCC ATCCTTGAAGTTGATGACTGCAAAGGACATACTTTCATTCAGGTTGAGCTTCCTATTTCGTTACCTAATTAACTACTAGG CAATATAATGGATCCATAACTAAAATGTTTTTAGTCTTGCTTTACGTCTTTGGTACATGAAGTTAGTTGTCTTAATTATT TTTTAATCACAGTTTGAGCCAGCTCCGAGGAGGGGAGAGCCTGATGTAACTAGAAGAACACCTGATTATTTCCTATGA
CDS sequence (LotjaGi4g1v0374500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAGAGAGCAATGTCCAGCCTGTAAAAAGTCCTGTTACAATTTGTGGTGATATTCATGGCCAATTTCATGATCTTGC AGAGCTTTTTCGCATTGGAGGGAAGTGTCCAGATACAAATTACTTGTTTATGGGAGATTATGTTGACCGTGGCTATTATT CTGTCGAAACCGTAACGCTTTTGGTTGCCCTTAAAGTGCGTTATCGGCAGCGCATCACTATTCTAAGGGGGAATCATGAA AGCCGACAGATTACTCAAGTTTATGGGTTTTATGATGAGTGCCTAAGGAAATATGGCAATGCTAATGTTTGGAAGATCTT CACTGATTTATTCGACTACTTTCCGTTGACAGCATTGGTCGAATCTGAAATATTTTGTCTTCATGGTGGGCTGTCCCCAT CTATTGAAACCCTTGATAACATTCGTAATTTTGATCGTGTACAAGAAGTTCCTCATGAGGGGCCCATGTGTGATCTTCTC TGGTCTGATCCGGATGATCGCTGTGGCTGGGGTATCTCTCCTAGGGGTGCTGGGTATACCTTTGGCCAGGACATATCTGA GCAATTTAACCATACCAATAACTTGAAGCTGATTGCTAGAGCTCACCAGCTGGTTATGGAAGGATATAACTGGGGTCATG ATCAAAAGGTGGTAACCATATTTAGTGCACCTAATTATTGCTATCGCTGTGGGAACATGGCATCCATCCTTGAAGTTGAT GACTGCAAAGGACATACTTTCATTCAGTTTGAGCCAGCTCCGAGGAGGGGAGAGCCTGATGTAACTAGAAGAACACCTGA TTATTTCCTATGA
Protein sequence (LotjaGi4g1v0374500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRQRITILRGNHE SRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLL WSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMEGYNWGHDQKVVTIFSAPNYCYRCGNMASILEVD DCKGHTFIQFEPAPRRGEPDVTRRTPDYFL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 270 | 270 | 1.8E-203 | – | |
| SMART | 1 | 254 | 254 | 1.3E-146 | ||
| Gene3D | 1 | 268 | 268 | 5.1E-121 | ||
| PANTHER | 1 | 270 | 270 | 1.8E-203 | – | |
| CDD | 1 | 254 | 254 | 0.0 | – | |
| SUPERFAMILY | 2 | 255 | 254 | 1.12E-107 | – | |
| Pfam | 12 | 203 | 192 | 7.2E-36 | ||
| PRINTS | 12 | 39 | 28 | 4.0E-91 | ||
| PRINTS | 41 | 68 | 28 | 4.0E-91 | ||
| PRINTS | 74 | 98 | 25 | 4.0E-91 | ||
| ProSitePatterns | 75 | 80 | 6 | - | ||
| PRINTS | 109 | 135 | 27 | 4.0E-91 | ||
| PRINTS | 138 | 165 | 28 | 4.0E-91 | ||
| PRINTS | 194 | 214 | 21 | 4.0E-91 | ||
| PRINTS | 216 | 232 | 17 | 4.0E-91 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. |
Expression pattern of LotjaGi4g1v0374500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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