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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0377900 |
| Transcript ID | LotjaGi4g1v0377900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | SCAR family protein; TAIR: AT2G34150.2 SCAR family protein; Swiss-Prot: sp|Q6AWX6|SCAR1_ARATH Protein SCAR1; TrEMBL-Plants: tr|A0A0B2PFQ0|A0A0B2PFQ0_GLYSO Protein SCAR1; Found in the gene: LotjaGi4g1v0377900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:75673793..75681828) extracted from Lotus japonicus Gifu genome v1.2.
CCCAAGTCCCAAATCAGTAATTTCACTCTTCATAGTTACCCCCTTCAACACTTTCCGGACACACAAGGCATTGTCCCCAA ACAACAAGGGCATCCTAGTACTTTCAACAATCCACCCTGTTCTCTGAGACAAGGATTTCCTTTGAAGAATGGCTTGCAGA GTTGGCAATGTCCTTCTTCTCCCTCATTCACTCCCCTTCATCGATCCGTACACTCCTTAACCTGCTCCCTCCTTCACTCT TCTTCGTCTCTTCTCTTTGGCAGTTACGCTGCTTCAATCTCCACACCCACCCACTTTCTCTCTCCTCTCCATTAAAAATC TCATTTTTCTCTCTCTTCATTCCCTTCATTTATTGCTTCCAATCACACTTGCACATTCATTCATTCATTTCAGAACAACC TTTCACCTACAAGGGCCAAAAAAAGATCATATTTTTTTGCTGGGTTTTCACTCTTTCAGTGAAGGGAAGATCAGAGATGC CTCTGGTGAGGTTGCAGGTGAGGAATGAGTTTAATTTGGGGCAACCTGAGCTATACAGAGAGGCTAACAGAGAAGACCCT AAAGCTGTGCTTGATGGTGTTGCTGTGGCTGGACTTGTTGGGATCTTGAGGCAGCTTGGTGATCTTGCTGAGTATGTCTT CTTTCAATTTTGAACTTTTGTTTACTCAAAAAGTTGCAATTTTTACCCATTTGGGCATTATTTGGGAAGTGGGGTTGGTT TGTTTTGGTAATTTCGAGGCTTAGAGGTTGTGGGGTGCTCAGAATGCTGGTTTTGGTAGTAACTGAATGTTGTTGCTATC TCACTGAGTTTTTGTACAGGAAGTAAGAAGCTTAGCTGTTATAGAATTGAGCTTCTTTTTGTTTTTTTAATTTTTTTGGG GATTTTCAATTGGTAGTGACATAATGCTCTTTGACTTTTTTTCTTTTCTGAGCTTTCCCATTGGATGGATTTCAGCTTTG TAGGCAGTTATTGGTTGTGTACAGTACAGCTATAACTTGGTTGCTCTTTGGATAATCATCACTGTTATGCTTTTAGCCTC TTAGAACTTTGAGTGGTTGGTTCACAAGGTGAAATGTTTGGAAGGAATGGAACTCACCTAAAAATGCTTCCTTGCTCTAA TATCATTACTAAATCTTGATTCTTTCTTCCATTTCTTCTTGACACTAAACTAATTCCATCTCATACTCCAGCAAAACAAC TGTAGATATAGTTCATAGTAGAAGTACTATTACTAATCTGATCCATTATGGATATAACTGGTTTTCTGTGTACAAAGAGA AGATGTATCTTTACCAAAGCAACTTCCTGCAGATAGCTAGTGATTACTGTTAGTTTTGCTTGCTATAAATCCTTGCTTAT GGTCTGTGTTTTTTGTTACTAAATTTTGCAAAGATCTCGTGTTATGTTTGTGTTAAAATAAATCACAAAAAGATATAATG TTAAAAGAAATAATGGTATGTCTTGTGTGGATTTGAATTCCACTTTCTGTTTACATGTTTAGTATGTGTGCCCCAGTCTC TGGTGTCGGACGATTGAGCAGTTCTTGATAATTGTGGCATTTTCTCTATGCTTCTTGAAACCTTGTTTAATATCATGTTA TGAATGCACTTTTATCTAAGTAGTTAGTTTTCCTTCTGGTGTTTGTTTGTATTGATGTTGAGTTTTACTGATGTAGCTTT TTTTGAAAATGTAGTTTTGCAGCAGAGGTTTTTCATGGTCTGCAGGAGCAAGTGATGACAACAGCTTCTAGGAGTCATAG ATTGAATGTTCGTGTACGGAACATTGAAGCGTCCCTGCCTTCCTTGGAGAGGGCTGTATTAGCACAAACAAGTCACATAC ATTTTGCTTACACAGCCGGTATGGTCCTTTTAAGCATTGATCTCATCTTGTATGAGGATTTGCTGGAAATGAACACATTA TTTTTGTGAATTATGTTCTGTTTAGCATGGAATGCATAAGTAGTCTAGGACCTGCAAAAGATGCGCAAAACTTGAATTCA AGTTTCACTTGTATCATTCAGGCAGTATGTTTATCTCAAATTAACTTTAATCTGAATCAGCAATTACTCAAGCACTCAAG TGGCAGTAAATTAGCTTTGCATAGATACCATACATTTATATTTTTGTATTGAATATGGAATACTACATTATTTAATGCTC ATGATGTTGATTTTCAGTCAATATAGGAGTTCTTGATGAAAAGCAGTTTATTTTCAGGTTGTGAATGGCATCCACGAATA AAAACTGCACGAAATCATTTCATATACAATGACTTGCCTCACTTTATTATGGACTCATATGAAGAATGCCGTGAACCTCC GCGTGTGCACTTGCTTGATAAGTATGTTGAAATTTCTTTCGATTCCCTTCCTTTCCCTGTTTGTCTTTCTGTTTGAAAAT AGCAAATTTAGTTCAGTACTACAGCTTAAACTAATTTCCAACTATTAGATGATGAAATATTTCATGTCGTTTCAAATTCG TAATGGTGTGCCTGGATCATGTCCCTGTCCATTTTGCCCATCTCTCTGTTTTCTTTCGAGCTCTGAAAGTATCAAGTACT ATGTCAGCTAATCTCGCGGTAATCGTTAATGAAAAATTTCATGTGTCAATCAGATTCGATACTAGTGGTCCTGGATCTTG TTTCCGTAGATATTCTGATCCAACCTTCTTCAGGAGAGTATCTACAGATTTAGACGAACCGTACTCTGAGAAGACTGAAA AGGCTAGGAAATCCCGTAAAAGCAAGGTACTATGATGATCCAAGCCTTTCAATGGAAGATTATTTTTAACTGAGTTTCAT TCCTGTCATATGCTTGCATTTAATTTCTTTGCAAACAATTTATTGGTGCTTATATAAAAAATGTTTGACAGAAGAGAAGA TCATCACGAAGGACTAGGGAACTTTTAAGGGGTGAACAGATGCATAGCAGTAGTGGCAGGTATAACTTATATGTCTATTG CATACTTACTTATGGCATACATATTGTATATTCAAAATCAACACTTACATAGTATATTCTCTCCCCCAGAATGCAATTTA GTTCTTCCACTATCAATGGCCGAACTTCTTCCTCACAAGCAGCCTCCACAATAGACATGGCAATGAAATCAGATATGGAG GATTATTCAAATTCTTTCGATTCAAAGTCTGGTGCTGGATACATAGAATGTGTTTTCCATCCAAGTAATTATCTGCAACC TGATGAGCAGGATTGTAAGGAACCATCCTCTTCCAGGTCGACACAGAAAATCAATAATCGTCAGTCTGTATCTCCTGCTA TAGATGATAGTATTTCACATGATTCATTGGAAAAGAAAATTGCCTCTAGTTCATCAGGTGTTACTTGGGATGAAAAAGAG GAGATAGTGGAATCTAATAGTCAAGCCTGTGATACAGATAAAATTACAGAGAGGCTTGTGGAAAAGCATGACTCAGATAT GCGTGTGGAAGAGGCTGTTGCCACAACAAATATTGATTATAATGATATCCTATACAATGAAGAAAGAAACCTGAAACAGG TCTCCAGCAGGGTTCAAATAGACGACATTGACAGTGAACCTGATGATTACATGGATGCTCTTAACACCATTGAATCAGAA TCTGAAATTGATCTTGATTATGAAACAAAACGAGAGTTGCAGCGGTTCACTTCACTTGTCACTGATGGAATGGTTGAAAA TGAAGTTACTAGATCTCCTTCTAAATTATTAGACAATAATGTATCTGATGTTCTGCAAACTGTCCCCTTAAATAAAGACA CAGGTGAGGAAGAAAGTGATCCCATATCTGAGCCACATGCATCAAATTTGGGATTGGTAAGTCCATCCAATGTTCTTGAT AGCATGAGAATTACCGGAGACACTTTTTCCGTAAGAAAAGAAGCATTCAGGGAGCCTGACTTTCTGCAAGAAATTCCTTC TCTCCCATCAGAACCACATGCATCAAATTTGGGATCGGTAAGTCCATCAGATGTTCTTGATAGCGAAAAAATTACCAGGG ACCCTGATTCCTTAAACAAAGAAGCGTTCAGGGAGCTTGATTTGCCACAAGAAATTCCTCCTGTCCCTTCAGAACCACAT GTGTCTAATTCAGAACCTGTGAATCCATCAGACGTTGCTTACAGCGAAGAAATTACCAGAGAGACCGTTTCCGTAAACAA AGAAATGCTTGGGAATTCTCCTGACTCACTGCAAGAAATTCCACCTCTCATACCAGAGCCACATGCAGAACCTGAGAATC TGTCAGATATTCTTCATAGCCAAGAAATTACCAGAGAGGCTGTTTCCTTAAACAAAGAAATGTTTGGGAATTTGCCTGAC TCACAGCAGGGAATTCCTCCTCTCACACCAGAGCCACATGCATCTAATTTGGGTTATGTAAGTTCATCTGATGTTTCTAG TACCAAGAATGTAGCTGATTCTCATTCATCTGAGAGTCCCAACTCTGAACAGGATCGTCATACACATAAAAATGATGTTT TAGATCACTCAGTATACACTCATACCTTCAGTGGTTCTCATACCGCTAATGATACAGTGTCAGCACCCATTAAAACAGAT ATATCATTTTCTGATTCTAGAAGCTCTAATTCACCAGATGAAGAAGCTGGTAAAATCAACAACAGTATCTGCAAATATGA AGAGACACGAAGAGATTCTTTGGGTGATCATCCAGTTTCATTCTGGACTAATGGTGGATTATTAGGACTTGAGCCATCAA AACCTCCTGACTTTGACAAGTCAAGTTCTTTAAGTCAAGGGCCTTTGAGCTCAAAAAGCGAGATGGATGGTGTTTCACGT CATGATTCAATGCAAAAGAGCAATGGTCATAAAGAGCAACAGGAGTTATCGCACGAGGTTACTGAACAGAATCGAAAGGG ATCAAGTTTTGGATTCTCAACAGCAAGGCATAATGATGGTCGATCTTGTATATCTGAAAAGACATCTGGCAGTTCTCAGC TGAGTAATGGATTTTGTCAAACCGAGAGGAACAGTTTGGCAGAAGCCGGGGTTATGGCACCTGGAAGTGTTCTCCCAGCT GGACCTGCCACAAGGGATTGTACTGAACACAGCCAGGGAAACGGTGAAAACTCATCACGGATGTTTGGACTTGGTCCTCG ATTGTTATTAAAAAGCTTCAACCGAAAAGTTTCTTTTGATGAAAAATCTGGACCTTATAATTCTCTGAGATCTGTTATAC TGGAGCAGAGTGGACAAAATGACACCGCCGACCAACCACTTCCTGAGACGACCTTTAAAGAGAAAGCTGGTTCTGGATAT CCTATAGATTCACTTCCTCCTTCACCGCCACTTGAAAATATGAAAATATCCTTCCGTCCTGTCAGCGGACTCGAGATCTC CAAATTAAAACTGAAGTTTCCTGATGGAAGTAATCACCATGAAAGTATAAGGGAGATGTTTCCTTCATTCCAGTTGGTCC CAGAGTCTTCTTCCATTCCTCTGGATGATTCAGTTTCTCACTCTGATGATGATGATACTTTCTGTAGATCATCTCCGTAT GTTTCAGATGGTTGTCATACCCCTTGCTCTGACTATGATTCTGATCAGTGGGAATCTGATGAAACTCCTGAAAGCAGTGA TCATGGGGTACTTGATTCTCCTCACAGTGAACCTATGTTAAGTTCAAAAGTACATGGTGGAGTGTCCAATGATGATACCA ACATAAAAAGTGGACATGGTACATATAATACAAATGGTGTGGAACCTTCTTTATCCGGGTCTTCACTTGACTTCCCAAGT TATGATACTGTGAATCCCTTTTTTGAGAAAGAAAGTAATGAACATTCCAAATGCAATAATGTTGTCATGTTACATAGCCA AGCAGAGCCTACACCACCACCCCCACCACGACCACCACCTCTTCCTCCGACTCAATGCCGGGTCTCAAAACCACAGTTGG ATGTGACAAATGAGACTCAAAACAATATGTCTGAAGATGCTGAACATATTTACAACCGAAGTCTTTCGGAATCTACTATC TTCCAGCAACGTAGGATCGCAAAGGTTGAGCAAATACAAAGTAATCATGACGGCCACGAGTCTTATGAAAACATGATACA CCAACTGAAGGAGAAGGTACTCATTGGTCTCATTTCCTTTACTAAAACATTATAGTTATGCAACCATGGTGGATAATGGA ATCTAACAAAAAGTATTCATCTTGTTATGCCTTTCCTGCAGCTGGATCAACCAAAGTTGAATGGTTGGAAGGAAGCAAAC CAGTTGAGAATGGGAAAGGAGACAGATGAAAGGGAAGATTTCCTACATCAAATCAGAGCAAAAGTAAGTAGTTATATTAT AGTTTCAACGATTTAAGGGTCAATATTCATTTTTGCACTCCAAAGAATCAAGTGTTGTCGATTTCATCCAATTATAAACA ACTCAAAGTAGTCATTAAATGTTAAATACTTCAATGTTTGGCATCAAATTTGTCCCTAACATGACATCAAATAAGTCCTC TGTTTGACTCAATTGATGATAAAGATTGACTTTGAAGAGTTATTTTGATGTATTTATAAATGGAAGATTCATCTCATGAT ATTTATTACTTTGGACTTTGGAGGACCGAAATTTGCATTTATTCATGATTTAGTAGTAGATGATAATTATGCTGAGTGTG AAACTATTCCTCTAATATTTCTCCTCGTTTCTAGATGAGTTTGGATCCTCTCCCGCCACTTTGCCTTCACCCTCCTAGTA GAATATTAGCCATTGATCTTCAATTTTAAGGGCTGAGATTGATTGAAAGTGAGAGATAAATTAAATGATTTACTGTACAA TTCACTTTTTATACTTGGTTGCACCTGCAGCCGCAGGAGAGGATCCGGATTCATAAAAAGATGGGGCAACATTAGAGAAT TGTAATTGATAAGAAATCACATTCTATTAGGACTAAGGATCTCTAGTTTACTTGTGACTATAATGTATATATATCTTGAA CTGGGCTATACCTTTCAACCATTAAGATCTGTTTACTTGAGCTTATCTTATAGCATAAGCGTTTATGTAAGTATTTGCGA GAACTTATGTACCTATTTTCATAAGGTGTTGAGATTAATTTATGTATAAGCGCTTATTACCTATAACCTATTATTAGCGT TTATTGACATCAGCACTTAATTAAGCTAGCTATCCAAACGCACACCAAGTCTAAATCTGAACCATATCAGTACATAACAT AATGTAGCAAACTAAGAAATCATGTTTATTAAAGTTAACTTTTGCATTGACTTGTCATTTATTGGTTCAGTCCTTCAACC TGCGGCCCACAGTAACAGGGAAGCCAAATGCTACCACGGTTCCCACTGCAAGCGTCAAGGTTACAGCAATTTTGGAGAAA GCAAATGCAATTCGTCAGGTATTCCTCACTCCTCTTCTGTTATCTAATACTATTTTTTCATTACTGCTTGCATTTTGCAT CTAACTCTGCATCCATTATCTGAGAAAACTTGCAGGTTGTTGGGAGCGATGATGGCGAAGAAGATGATGATACCTGGAGT GATACATGAAATTTGTTTTTTTGAATTTTATTTTTTTTAGCTTCATACATGAGCAGTCCTATATGTTTTTAAGCCTCTTG AAGTGCAGATGCATGAGGCTTTGTTGTAAGTACACATGTGTGAATAAATATTGTCTAGTTGTAATTTAGTTTAGTGCAGC AGCGGCTATTTTCTCTAATTTCATTATCATATGAATTTGTCTTCTTTAGCAGTTTTTGCATTGAATCTTTCAGCTGTGTA AATCAGGTTGAGCCAATATAATCCGAGATAGCTAAGTTCCTGGGGAAAAAGTTAAGAAGATATACCATTAAAATAGGTGG TGTGCTGGTAAATATTTGTAACTTCTTGAGTTTGATTTGTAAATATGTTTAATGGAGCTTGAAATTCACCACTAGATTTC ATAATCATGTCATGTGTCATGTTTCTCCATTATCTTCTTTAACATAAAATGACATAATCATGTCTCATGTTTCTCCATTA TCTTCTTTAGCATTGTTCGACCTTAGATTTGTTGAC
CDS sequence (LotjaGi4g1v0377900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCCTTCTTCTCCCTCATTCACTCCCCTTCATCGATCCGTACACTCCTTAACCTGCTCCCTCCTTCACTCTTCTTCGT CTCTTCTCTTTGGCAGTTACGCTGCTTCAATCTCCACACCCACCCACTTTCTCTCTCCTCTCCATTAAAAATCTCATTTT TCTCTCTCTTCATTCCCTTCATTTATTGCTTCCAATCACACTTGCACATTCATTCATTCATTTCAGAACAACCTTTCACC TACAAGGGCCAAAAAAAGATCATATTTTTTTGCTGGGTTTTCACTCTTTCAGTGAAGGGAAGATCAGAGATGCCTCTGGT GAGGTTGCAGGTGAGGAATGAGTTTAATTTGGGGCAACCTGAGCTATACAGAGAGGCTAACAGAGAAGACCCTAAAGCTG TGCTTGATGGTGTTGCTGTGGCTGGACTTGTTGGGATCTTGAGGCAGCTTGGTGATCTTGCTGATTTTGCAGCAGAGGTT TTTCATGGTCTGCAGGAGCAAGTGATGACAACAGCTTCTAGGAGTCATAGATTGAATGTTCGTGTACGGAACATTGAAGC GTCCCTGCCTTCCTTGGAGAGGGCTGTATTAGCACAAACAAGTCACATACATTTTGCTTACACAGCCGGTTGTGAATGGC ATCCACGAATAAAAACTGCACGAAATCATTTCATATACAATGACTTGCCTCACTTTATTATGGACTCATATGAAGAATGC CGTGAACCTCCGCGTGTGCACTTGCTTGATAAATTCGATACTAGTGGTCCTGGATCTTGTTTCCGTAGATATTCTGATCC AACCTTCTTCAGGAGAGTATCTACAGATTTAGACGAACCGTACTCTGAGAAGACTGAAAAGGCTAGGAAATCCCGTAAAA GCAAGAAGAGAAGATCATCACGAAGGACTAGGGAACTTTTAAGGGGTGAACAGATGCATAGCAGTAGTGGCAGAATGCAA TTTAGTTCTTCCACTATCAATGGCCGAACTTCTTCCTCACAAGCAGCCTCCACAATAGACATGGCAATGAAATCAGATAT GGAGGATTATTCAAATTCTTTCGATTCAAAGTCTGGTGCTGGATACATAGAATGTGTTTTCCATCCAAGTAATTATCTGC AACCTGATGAGCAGGATTGTAAGGAACCATCCTCTTCCAGGTCGACACAGAAAATCAATAATCGTCAGTCTGTATCTCCT GCTATAGATGATAGTATTTCACATGATTCATTGGAAAAGAAAATTGCCTCTAGTTCATCAGGTGTTACTTGGGATGAAAA AGAGGAGATAGTGGAATCTAATAGTCAAGCCTGTGATACAGATAAAATTACAGAGAGGCTTGTGGAAAAGCATGACTCAG ATATGCGTGTGGAAGAGGCTGTTGCCACAACAAATATTGATTATAATGATATCCTATACAATGAAGAAAGAAACCTGAAA CAGGTCTCCAGCAGGGTTCAAATAGACGACATTGACAGTGAACCTGATGATTACATGGATGCTCTTAACACCATTGAATC AGAATCTGAAATTGATCTTGATTATGAAACAAAACGAGAGTTGCAGCGGTTCACTTCACTTGTCACTGATGGAATGGTTG AAAATGAAGTTACTAGATCTCCTTCTAAATTATTAGACAATAATGTATCTGATGTTCTGCAAACTGTCCCCTTAAATAAA GACACAGGTGAGGAAGAAAGTGATCCCATATCTGAGCCACATGCATCAAATTTGGGATTGGTAAGTCCATCCAATGTTCT TGATAGCATGAGAATTACCGGAGACACTTTTTCCGTAAGAAAAGAAGCATTCAGGGAGCCTGACTTTCTGCAAGAAATTC CTTCTCTCCCATCAGAACCACATGCATCAAATTTGGGATCGGTAAGTCCATCAGATGTTCTTGATAGCGAAAAAATTACC AGGGACCCTGATTCCTTAAACAAAGAAGCGTTCAGGGAGCTTGATTTGCCACAAGAAATTCCTCCTGTCCCTTCAGAACC ACATGTGTCTAATTCAGAACCTGTGAATCCATCAGACGTTGCTTACAGCGAAGAAATTACCAGAGAGACCGTTTCCGTAA ACAAAGAAATGCTTGGGAATTCTCCTGACTCACTGCAAGAAATTCCACCTCTCATACCAGAGCCACATGCAGAACCTGAG AATCTGTCAGATATTCTTCATAGCCAAGAAATTACCAGAGAGGCTGTTTCCTTAAACAAAGAAATGTTTGGGAATTTGCC TGACTCACAGCAGGGAATTCCTCCTCTCACACCAGAGCCACATGCATCTAATTTGGGTTATGTAAGTTCATCTGATGTTT CTAGTACCAAGAATGTAGCTGATTCTCATTCATCTGAGAGTCCCAACTCTGAACAGGATCGTCATACACATAAAAATGAT GTTTTAGATCACTCAGTATACACTCATACCTTCAGTGGTTCTCATACCGCTAATGATACAGTGTCAGCACCCATTAAAAC AGATATATCATTTTCTGATTCTAGAAGCTCTAATTCACCAGATGAAGAAGCTGGTAAAATCAACAACAGTATCTGCAAAT ATGAAGAGACACGAAGAGATTCTTTGGGTGATCATCCAGTTTCATTCTGGACTAATGGTGGATTATTAGGACTTGAGCCA TCAAAACCTCCTGACTTTGACAAGTCAAGTTCTTTAAGTCAAGGGCCTTTGAGCTCAAAAAGCGAGATGGATGGTGTTTC ACGTCATGATTCAATGCAAAAGAGCAATGGTCATAAAGAGCAACAGGAGTTATCGCACGAGGTTACTGAACAGAATCGAA AGGGATCAAGTTTTGGATTCTCAACAGCAAGGCATAATGATGGTCGATCTTGTATATCTGAAAAGACATCTGGCAGTTCT CAGCTGAGTAATGGATTTTGTCAAACCGAGAGGAACAGTTTGGCAGAAGCCGGGGTTATGGCACCTGGAAGTGTTCTCCC AGCTGGACCTGCCACAAGGGATTGTACTGAACACAGCCAGGGAAACGGTGAAAACTCATCACGGATGTTTGGACTTGGTC CTCGATTGTTATTAAAAAGCTTCAACCGAAAAGTTTCTTTTGATGAAAAATCTGGACCTTATAATTCTCTGAGATCTGTT ATACTGGAGCAGAGTGGACAAAATGACACCGCCGACCAACCACTTCCTGAGACGACCTTTAAAGAGAAAGCTGGTTCTGG ATATCCTATAGATTCACTTCCTCCTTCACCGCCACTTGAAAATATGAAAATATCCTTCCGTCCTGTCAGCGGACTCGAGA TCTCCAAATTAAAACTGAAGTTTCCTGATGGAAGTAATCACCATGAAAGTATAAGGGAGATGTTTCCTTCATTCCAGTTG GTCCCAGAGTCTTCTTCCATTCCTCTGGATGATTCAGTTTCTCACTCTGATGATGATGATACTTTCTGTAGATCATCTCC GTATGTTTCAGATGGTTGTCATACCCCTTGCTCTGACTATGATTCTGATCAGTGGGAATCTGATGAAACTCCTGAAAGCA GTGATCATGGGGTACTTGATTCTCCTCACAGTGAACCTATGTTAAGTTCAAAAGTACATGGTGGAGTGTCCAATGATGAT ACCAACATAAAAAGTGGACATGGTACATATAATACAAATGGTGTGGAACCTTCTTTATCCGGGTCTTCACTTGACTTCCC AAGTTATGATACTGTGAATCCCTTTTTTGAGAAAGAAAGTAATGAACATTCCAAATGCAATAATGTTGTCATGTTACATA GCCAAGCAGAGCCTACACCACCACCCCCACCACGACCACCACCTCTTCCTCCGACTCAATGCCGGGTCTCAAAACCACAG TTGGATGTGACAAATGAGACTCAAAACAATATGTCTGAAGATGCTGAACATATTTACAACCGAAGTCTTTCGGAATCTAC TATCTTCCAGCAACGTAGGATCGCAAAGGTTGAGCAAATACAAAGTAATCATGACGGCCACGAGTCTTATGAAAACATGA TACACCAACTGAAGGAGAAGCTGGATCAACCAAAGTTGAATGGTTGGAAGGAAGCAAACCAGTTGAGAATGGGAAAGGAG ACAGATGAAAGGGAAGATTTCCTACATCAAATCAGAGCAAAATCCTTCAACCTGCGGCCCACAGTAACAGGGAAGCCAAA TGCTACCACGGTTCCCACTGCAAGCGTCAAGGTTACAGCAATTTTGGAGAAAGCAAATGCAATTCGTCAGGTTGTTGGGA GCGATGATGGCGAAGAAGATGATGATACCTGGAGTGATACATGA
Protein sequence (LotjaGi4g1v0377900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSFFSLIHSPSSIRTLLNLLPPSLFFVSSLWQLRCFNLHTHPLSLSSPLKISFFSLFIPFIYCFQSHLHIHSFISEQPFT YKGQKKIIFFCWVFTLSVKGRSEMPLVRLQVRNEFNLGQPELYREANREDPKAVLDGVAVAGLVGILRQLGDLADFAAEV FHGLQEQVMTTASRSHRLNVRVRNIEASLPSLERAVLAQTSHIHFAYTAGCEWHPRIKTARNHFIYNDLPHFIMDSYEEC REPPRVHLLDKFDTSGPGSCFRRYSDPTFFRRVSTDLDEPYSEKTEKARKSRKSKKRRSSRRTRELLRGEQMHSSSGRMQ FSSSTINGRTSSSQAASTIDMAMKSDMEDYSNSFDSKSGAGYIECVFHPSNYLQPDEQDCKEPSSSRSTQKINNRQSVSP AIDDSISHDSLEKKIASSSSGVTWDEKEEIVESNSQACDTDKITERLVEKHDSDMRVEEAVATTNIDYNDILYNEERNLK QVSSRVQIDDIDSEPDDYMDALNTIESESEIDLDYETKRELQRFTSLVTDGMVENEVTRSPSKLLDNNVSDVLQTVPLNK DTGEEESDPISEPHASNLGLVSPSNVLDSMRITGDTFSVRKEAFREPDFLQEIPSLPSEPHASNLGSVSPSDVLDSEKIT RDPDSLNKEAFRELDLPQEIPPVPSEPHVSNSEPVNPSDVAYSEEITRETVSVNKEMLGNSPDSLQEIPPLIPEPHAEPE NLSDILHSQEITREAVSLNKEMFGNLPDSQQGIPPLTPEPHASNLGYVSSSDVSSTKNVADSHSSESPNSEQDRHTHKND VLDHSVYTHTFSGSHTANDTVSAPIKTDISFSDSRSSNSPDEEAGKINNSICKYEETRRDSLGDHPVSFWTNGGLLGLEP SKPPDFDKSSSLSQGPLSSKSEMDGVSRHDSMQKSNGHKEQQELSHEVTEQNRKGSSFGFSTARHNDGRSCISEKTSGSS QLSNGFCQTERNSLAEAGVMAPGSVLPAGPATRDCTEHSQGNGENSSRMFGLGPRLLLKSFNRKVSFDEKSGPYNSLRSV ILEQSGQNDTADQPLPETTFKEKAGSGYPIDSLPPSPPLENMKISFRPVSGLEISKLKLKFPDGSNHHESIREMFPSFQL VPESSSIPLDDSVSHSDDDDTFCRSSPYVSDGCHTPCSDYDSDQWESDETPESSDHGVLDSPHSEPMLSSKVHGGVSNDD TNIKSGHGTYNTNGVEPSLSGSSLDFPSYDTVNPFFEKESNEHSKCNNVVMLHSQAEPTPPPPPRPPPLPPTQCRVSKPQ LDVTNETQNNMSEDAEHIYNRSLSESTIFQQRRIAKVEQIQSNHDGHESYENMIHQLKEKLDQPKLNGWKEANQLRMGKE TDEREDFLHQIRAKSFNLRPTVTGKPNATTVPTASVKVTAILEKANAIRQVVGSDDGEEDDDTWSDT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 11 | 11 | - | – | |
| Phobius | 12 | 31 | 20 | - | – | |
| Phobius | 32 | 42 | 11 | - | – | |
| Phobius | 43 | 62 | 20 | - | – | |
| Phobius | 63 | 1427 | 1365 | - | – | |
| PANTHER | 104 | 1427 | 1324 | 1.8E-287 | ||
| Gene3D | 104 | 193 | 90 | 6.6E-8 | – | |
| PANTHER | 104 | 1427 | 1324 | 1.8E-287 | – | |
| Gene3D | 210 | 356 | 147 | 2.6E-9 | – | |
| MobiDBLite | 280 | 336 | 57 | - | – | |
| MobiDBLite | 313 | 336 | 24 | - | – | |
| MobiDBLite | 374 | 435 | 62 | - | – | |
| MobiDBLite | 385 | 404 | 20 | - | – | |
| MobiDBLite | 560 | 582 | 23 | - | – | |
| MobiDBLite | 613 | 639 | 27 | - | – | |
| MobiDBLite | 617 | 634 | 18 | - | – | |
| MobiDBLite | 658 | 683 | 26 | - | – | |
| MobiDBLite | 669 | 683 | 15 | - | – | |
| MobiDBLite | 706 | 805 | 100 | - | – | |
| MobiDBLite | 763 | 786 | 24 | - | – | |
| MobiDBLite | 787 | 804 | 18 | - | – | |
| MobiDBLite | 829 | 966 | 138 | - | – | |
| MobiDBLite | 829 | 845 | 17 | - | – | |
| MobiDBLite | 848 | 863 | 16 | - | – | |
| MobiDBLite | 886 | 901 | 16 | - | – | |
| MobiDBLite | 903 | 930 | 28 | - | – | |
| MobiDBLite | 931 | 966 | 36 | - | – | |
| MobiDBLite | 981 | 1010 | 30 | - | – | |
| MobiDBLite | 1040 | 1055 | 16 | - | – | |
| MobiDBLite | 1040 | 1081 | 42 | - | – | |
| MobiDBLite | 1122 | 1224 | 103 | - | – | |
| MobiDBLite | 1194 | 1224 | 31 | - | – | |
| MobiDBLite | 1252 | 1274 | 23 | - | – | |
| MobiDBLite | 1256 | 1274 | 19 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Cytoskeleton | Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles. | ||
| Biological process | Actin cytoskeleton organization | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins. |
Expression pattern of LotjaGi4g1v0377900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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