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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0380200 |
| Transcript ID | LotjaGi4g1v0380200.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Glutathione S-transferase; TAIR: AT2G29490.1 glutathione S-transferase TAU 1; Swiss-Prot: sp|Q9FQA3|GST23_MAIZE Glutathione transferase GST 23; TrEMBL-Plants: tr|A0A0B2SMZ2|A0A0B2SMZ2_GLYSO Putative glutathione S-transferase; Found in the gene: LotjaGi4g1v0380200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:75962340..75964593) extracted from Lotus japonicus Gifu genome v1.2.
CCATTGACTTTGCTTCTTCATAGTGTAAAACTAGTTCTTTTATTCTTCTTAGTGCAAAATTAGTTCTGAAACAGATAAGA TCATGGAAAGCAAAGAGGTGAAGTTAGTGAGCTTCTGGGCAAGTTCCTATGGTAAAAAAGTTGAGTGGGCTTTGAAGCTG AAGGGTGTTGAATATGAGTATGTAGAAGAAGATATCTTCAACAAAAGCAATCTCCTTCTAGAATTGAACCCGGTTCACAA GAAGGTTCCGGTTCTTGTTCATGGCAACAAACCAATTGCTGAGTCACTCATCATCCTTGAATATATTGATGAGACATGGA AGCATCAATATCCATTGTTTCCTCAAGATCCTTATGAAAGGGCTCTTGCTCGCTTTTGGGCTGCTTCTATCGAACCCAAG GTAATTAATTTATCACATTCATCATATTATTCTTTTTATTATCTATATATTCTTTTTGGTTTTGGAATAAACATGGAGAT TCCAATTAATGAATAAAAATTTTTAAAATTTTAATTGCATATTTGGCTATTCTGAAAAAAAAAAATTAGTTCTCTAATTG TTTTAGTTATTCTTTATTTTAAGTTAATTAGGGAATATTTTATATATTAGAAAAATTCAAATCTTCATTCTTTATTTAAA TTCTTTAGACTTCATTATAAATTAAGAATATAAAATAATTTTGTACATTTAAAAGTTAAAACTTTGGTACGAGATTTTAT TTATATTCTTAAACCTTTTTTTCTTCTTTTTGAACTTTTTTATCAAAAAGAAGTGTGATAGAAAAGTTAATATTTCCCAA TACAATGCTTACAATTATATAATAAATGCATGAAGTTTACTTCAACAATCAGAGTGGCGCAGCGGAAGCGTGGTGGGCCC ATAACCCACAGGTCCCAGGATCGAAACCTGGCTCTGATATATCAGAGTGGCTTCCTTTATTTTTTCAACAATTTTTATTT ACCTACCTTTTAAGTGTTTTTCCTTAAAAGCTATTATACAAATTATTTACTATTAAAAACATTGGGTTTTTCGTGACCAC ATAATGTAAAATTGTCAATTTATATTCCAATATGCAGTAAAAAACTTATTTTGTTTTCTTTTCAAAAAACAGGAAACACA AAACCTCACATTCTAATGCGGTAATCCCTTACTTCTTTATATTTGTAATAGCTATTGAAGGCTGCATGGGTTGAACTATT TACCAGTGGTGATGAACAAGAAAATGCAATGAAGGAAGCAACAGAAGGTCTGGAGATGGTAGAAGAACAGATTAAGGGGA AGAAATTCTTTGGGGGGATAACATTGGCTACCTTGACCTTGCAATTGGTTGGTTCTCTTACTGGATTTCTGTTTGGGAGG AAGTTGGGTCTAGGGATTACCGCATTAGAATGTGAGGTTTTGTGTTTCCTGTTTTTTGAAAAGAAAACAAAATAAGTTTT TTACTGCATATTGGAATATAAATTGACAATTTTACATTATGTGGTCACGAAAAACCCACAGGTCCCAGGATCGAAACCTG GCTCTGATATATCAGAGTGGCTTCCTTTATTTTTTCAACAATTTTTATTTACCTACCTTTTAAGTGTTTTTCCTTAAAAG CTATTATACAAATTATTTACTATTAAAAACATTGGGTTTTTCGTGACCACATAATGTAAAATTGTCAATTTATATTCCAA TATGCAGTAAAAAACTTATTTTGTTTTCTTTTCAAAAAACAGGAAACACAAAACCTCACATTCTAATGCGGTAATCCCTT ACTTCTTTATATTTGTAATAGCTATTGAAGGCTGCATGGGTTGAACTATTTACCAGTGGTGATGAACAAGAAAATGCAAT GAAGGAAGCAACAGAAGGTCTGGAGATGGTAGAAGAACAGATTAAGGGGAAGAAATTCTTTGGGGGGATAACATTGGCTA CCTTGACCTTGCAATTGGTTGGTTCTCTTACTGGATTTCTGTTTGGGAGGAAGTTGGGTCTATTAAGATACTTGATCCAT TGAAATATCCAGCCACCACTACATGGATGACCAATTTTCTCATCCACCCTATGATCAAGGACACTTGGCCCCCAAGAGAC AAAATGCTTGTTTACACCCATAGTCTCATAAGCAAATATGGCTCAGCTAAAGTCAAGGGATGAGTTTTAGAACATTATGT GTAAACATTTTGTAAAATTAATATGTGAGGTTATGATAAAATATGTTGGGGGTGAATTTAAGTAGTACATGTTTTATTCT CTTTAAATAAAGTT
CDS sequence (LotjaGi4g1v0380200.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAAGCAAAGAGGTGAAGTTAGTGAGCTTCTGGGCAAGTTCCTATGGTAAAAAAGTTGAGTGGGCTTTGAAGCTGAA GGGTGTTGAATATGAGTATGTAGAAGAAGATATCTTCAACAAAAGCAATCTCCTTCTAGAATTGAACCCGGTTCACAAGA AGGTTCCGGTTCTTGTTCATGGCAACAAACCAATTGCTGAGTCACTCATCATCCTTGAATATATTGATGAGACATGGAAG CATCAATATCCATTGTTTCCTCAAGATCCTTATGAAAGGGCTCTTGCTCGCTTTTGGGCTGCTTCTATCGAACCCAAGCT ATTGAAGGCTGCATGGGTTGAACTATTTACCAGTGGTGATGAACAAGAAAATGCAATGAAGGAAGCAACAGAAGGTCTGG AGATGGTAGAAGAACAGATTAAGGGGAAGAAATTCTTTGGGGGGATAACATTGGCTACCTTGACCTTGCAATTGGCTGCA TGGGTTGAACTATTTACCAGTGGTGATGAACAAGAAAATGCAATGAAGGAAGCAACAGAAGGTCTGGAGATGGTAGAAGA ACAGATTAAGGGGAAGAAATTCTTTGGGGGGATAACATTGGCTACCTTGACCTTGCAATTGGTTGGTTCTCTTACTGGAT TTCTGTTTGGGAGGAAGTTGGGTCTATTAAGATACTTGATCCATTGA
Protein sequence (LotjaGi4g1v0380200.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MESKEVKLVSFWASSYGKKVEWALKLKGVEYEYVEEDIFNKSNLLLELNPVHKKVPVLVHGNKPIAESLIILEYIDETWK HQYPLFPQDPYERALARFWAASIEPKLLKAAWVELFTSGDEQENAMKEATEGLEMVEEQIKGKKFFGGITLATLTLQLAA WVELFTSGDEQENAMKEATEGLEMVEEQIKGKKFFGGITLATLTLQLVGSLTGFLFGRKLGLLRYLIH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SFLD | 1 | 159 | 159 | 0.0 | – | |
| Gene3D | 1 | 85 | 85 | 4.3E-38 | ||
| SFLD | 1 | 159 | 159 | 0.0 | – | |
| Phobius | 1 | 144 | 144 | - | – | |
| ProSiteProfiles | 4 | 83 | 80 | 23.0 | ||
| SUPERFAMILY | 5 | 104 | 100 | 9.97E-25 | ||
| Pfam | 5 | 77 | 73 | 3.8E-18 | ||
| PANTHER | 5 | 159 | 155 | 1.5E-80 | – | |
| PANTHER | 5 | 159 | 155 | 1.5E-80 | – | |
| CDD | 6 | 79 | 74 | 7.41259E-43 | – | |
| SUPERFAMILY | 77 | 156 | 80 | 7.24E-19 | ||
| Gene3D | 86 | 167 | 82 | 1.2E-18 | – | |
| ProSiteProfiles | 89 | 211 | 123 | 9.392 | ||
| Coils | 119 | 139 | 21 | - | – | |
| Phobius | 145 | 162 | 18 | - | – | |
| PANTHER | 155 | 214 | 60 | 1.5E-80 | – | |
| PANTHER | 155 | 214 | 60 | 1.5E-80 | – | |
| SUPERFAMILY | 159 | 197 | 39 | 6.21E-6 | ||
| Phobius | 163 | 193 | 31 | - | – | |
| Coils | 168 | 188 | 21 | - | – | |
| Phobius | 194 | 216 | 23 | - | – | |
| TMHMM | 194 | 216 | 23 | - | – | |
| Phobius | 217 | 228 | 12 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi4g1v0380200.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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