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LotjaGi4g1v0385400.1

Overview

Field Value
Gene ID LotjaGi4g1v0385400
Transcript ID LotjaGi4g1v0385400.1
Lotus japonicus genome version Gifu v1.2
Description Disease resistance protein (NBS-LRR class) family; TAIR: AT4G27190.1 NB-ARC domain-containing disease resistance protein; Swiss-Prot: sp|Q9T048|DRL27_ARATH Disease resistance protein At4g27190; TrEMBL-Plants: tr|K7KQM7|K7KQM7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0385400
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr4:76358221..76364642) extracted from Lotus japonicus Gifu genome v1.2.

TGACCCAGTCCCTATTTCGAGTGTTGACCCAAGAAGCAACTCTGCACCTTCCCTTCACTCCACTGGAGAGAGAATTGAAG ATTCAAGTAAGTCAAGTCAACTAATCTAGCTTTTCTCTCTCAGGATCAATCCATCTATGTCCAACAGCATTGCAGGCTGC AGCAGCTACTAGCAGAGGTACACATGAATCTCTCTCTTTCTTTCATAAGCCATTTCTTGAAATTAATAGCTAGCATAAAG TGGTGAATGCTAAGATGGATCCTAAATTCTGAAACATTACAGCTGTTTGATTCTGCCCTGAATTGTATGACATGTTAAAT GAAACTCCTTTGCTGCTACTGCAGCCAATTTCTTAATTTTTTTTTATCACCATCCACTGTTATTATATTTAGTTATCGCC AATTCTCCATATCTCCTTCTACTTCATCATGCCTTTTGAATTTAGCGTGTCATTCTTTTCCAATAAGTAGTTATCTTTTA TTTTTTTCATTTGGGATTTTTTTTTATTCAGCAAATCTATGAATCAAACAAATAATTACAATATCAACGATAAGAGCACA ATTGATTGATAATTGACCTTCTTAAGTATCTAGTTCAGGGTTTTATCCCTGAATGGTGTGCATGAAAAATGATTAGTTGG AAGAGGTCTACTACTCACTTAATGTGATCTTAGAGTTTTGACGCGTTCATTCACATGGTTATGTCCGCTATGAGTATACC TTGGAAAAAAAAGCAAATAATTACGAGCTACTCCAATGTGCAAATTAACATATTCAAGTTTTGGGTTTCGCATATTCATG ATTTAATGCTTTCAATATTTCTGACCTGTTTAGAATTTCTATTGGTGCATTATATAATTATTTCTTTTATTCTCCTGGTT AACATATTCTGAACCTGACAATAGGGTCTGAACTTCAATAATGTCTGGCTTTGAGGTGGGGATTGGAAAACTATACACTA ACATCCGTGGCAAAGTTGCATCTTCCAAAAATCTAGATGAACTCAACGAAATTTTGGTCAAGGATATAAAGATGCTACTT GCAATACAGGAGGATAAAGAGAGGCAAGTTCAAAGAAACAAACAGAAAGATACCACTAATGCTTACAAACTATGGACAAA CCTGGTATCAAAGGCTGCAGGAGAAGTGCAGAAACTGATAACTGAATATGATACAGAAAGCCTGCCTTGGTGGTGTATTC TAAGACGATCACGTCTGAGTGAAAAGATGACCAAAATGTACAATTGTGTTCATGGACTAATGACAGATGCACACTCAAGA GATTTTCTAGTTGATAAACTGCCAGAGCGTGTCTTGAAGGAGCTAGGTGTTCCACATATAAGTGGATATCCAACCCTACA AATTTCCTTGGAAAAGATTCTTGGTTTCCTAAAAAACAGTAAGATCAAAGTTATTGGAGTGTGTGGAACAAAAGGGGTGG GAAAAACAACAATACTGCACAACCTAAACAACAACGAAGAGGTTGCTAAAATGTTTGATATTGTCATTTTTGTGAGAATC ACAGCTGATGAGGGAGATGATCAGAAGATTCAAGAGAAAATTGCAAATAGATTGATGCTCGACATAACGACCATCCAGGA CCATGCTGATGTTGCAAGAACAATTTACAATGATCTAGCAAACAAGAAGTATTTATTGATTCTGGATGGGGTTGTAGGCC CCACTGATTTTGAGCATTTGGGAATTCCAAGTGATAAAAATGGCAGTAAGGTGGTGATTTCCAGTCAATTCCTTCGAGAT TGTAAGTTGAATGGGGTGGAAAGGGTCATCAAAGTCAAAGAGCTATCTCCTGATGAAGCATGGAAGATGTTTAGAGATAT TGTCTGTGACAATGCCACTAGTCATATGATTGATTCCCCTGATATCCAACCTATTGCTCACCTTGTATGTAACAGGTGCT CTAGGCTTCCACTTCTCATTCACAAAATAGCAAACTCTTTTAAATTGAAAGGTTCCGCTTCTAGTTGGTGGGCAGGGCTT GAGGATCTTAAACCATGGCCAGAACTTCAAAATCAAGGTTTGAAAGAGTTGTTCTCATTCTTGAAATTCTGTTATGATGA ACTGAAAGATGAAAAGAAACAAAAATGTTTTCTATACACATCAATGTACCCCACAGAAAACAAGATTTACACCGATTATT TAGTTGAGTGTTGGGCAGCACAAGGCTTACTCGGTGATATAAATGATGCAAGGCGATATCGAAGTGCACGCAACCGTGGT ATTGACATATTAGAGCACCTTACTGATGTCTCTTTGCTAGAGAAGGGGGAGCAGATGACATATGTCAAGATGAATGATTG TATGAGACAACTTGCCTTATTCATATCCTCTAAAGATCCTGAGTGTAGCTTTTACCTCCAAGAAAGGGAAGAAACTGAAA ATGTCTCAAATTCAAGAGCTTGGCAGCAGGTTAAGTGGGTCTCTATGATTGATAGAAAGATGCTCGATTTACCTGCAAAC CAAGATTTCAGCATGGTTTTGACATTATTGCTGCAAAAGAATCCAGAGCTGACTACAATACCTCAAACATTTTTTGAGAG CATGAACACTCTTCTCTTGTTAGACTTGTATGGTACCGGAATTAGAGAGCTACCATCATCTCTATCAAAATTGACCTGTC TCAGGGCTTTATTTCTGAACAATTGTGTGTTTTTAAGATCATTGCCATCTGAAATAGGATCATTTCAATGGCTAGAGGTC CTTGACATTCTTGACACCAAAGTGCCTTTCATACCTATCCATATCGGATATTTGAATAAGCTAAGATGCTTGCGAATCTC ATTCATTGCAAGTGATGAAGAAAATAAAGTTGAAAATTTTCATGTGATCTCAAAGCTCCAGAGGTTAGAAGAATTAACCA TTCAAGTCATAAGCTATGAGCAATGGTCTAATGATGCTGAAGGAGTCCTACAACAGGTGGCTTTGTTGGAAAATTTAACT ACTCTCAAGTGTTGCTTTCCCTCCCCAGACATTCTTAGGAACTTTCTTCAGACAAGCAAATCATGGAGAGGTTGTGAGAA AGAAATATCATTCAGATTCTTTGTTGGATGCCAAAACTCAAGACGACCTCAAATACTTGGATCCTTTGAGCATAAAATTA CAAATTACTTGAAGTATTGCAATGGTGAACTGAAGGACGACTTCACAATTAGTGAGATACTACCTAATACTGATGCTTTG GAATTAATTTGCCACAAAGATATTAGAAGGTTATCAAACTTTGTTGGAACAAGGCCTTTGAATCGCATCCGTGGCCTTTT GATTGAAAAATGCAACAAATTTTCCACAATTGTGGTGGACGATTTAAGTTGCAACCCCATAAATGGAATCCAATCAGAAA ACAGAGCCCTCTTGCCAAATTTGGAGCAATTGTATTTGGAAAATTTGCTCAATTTAACATGTGCTTTTAGGGGTCCCGTG CATATTGGAACACTTGCCAAATTACAAATTTTGTCATTGAAGAACTGTCCATACCTGAGTGAAATTTTCAGCAATGGAGC ACTTCAACATTTTTCAGAACTTCAGAAGCTGAAAATTGAAGATTGTGCAAAACTTGAAGAACTTATTGTTCTTAGAGAAG GCTCTCAAGGAGAAAGGCACGTCCTTCCCAAACTAGAGATGCTACTGCTGGTTAACTTGCCTAACTTCAAAAGTATATGC TCAAACCAGACATTGGATTGGCCCTCTTTAGAGCTACTAAGGATACATAGATGTCCTAATTTGAAAACTTTACCATTTGA TGCTAGCAACGCAACCAACTTGAGGTCCATTGAAGGGGAGCAAAAATGGTGGGATGAGTTGAAATGGACAAACAATAGCA ATGAGGAACGCCTCTTACATCTTGCATGCCCTAGTGCCAAAAGGCAAAGGTGAATCCCTCATATTGTATACGGTCGAGCT GCCTTCCCTCATCTCTCTATCGAGAATGGGGAATAGAAGGAAGACTCCACTCTCCATGATAGCTGGCTGCACTGAGCCGG AAGTCTGGATATGTTGACCAAAATGATGATCTGGATGGAACGGTATGCGGTGACAACTTGTGTTTGTTGCCTTCAATGAG TAGTTTCCCTAGATATCTTCTTATGGTTGTAAAATGTTAGATGCTAATATAGAGTTTGTTGTCTCAGTTTGTTGCAAGAA AAAAGACTGCTACTGTAATGTTTTATGGTTTTCTGTGTTTTAAAAAAGTTGGTCCTATAGAACTAGAATAGAGTTTGATG TCTCATCAACTATTTGTATTTAGAAACAATGTTCTACCAATAATCCCCACAAGAACATACACCATTCTTAAAGTGATGAA AGCGGCTAGAATCTCTTACTATTATCTCACGGTCAACAATCTTTGCCATAAGCTTTATTGCATTATGACAATCACCACAT ACACGCAGATTTTTCATCACTGTTATGGTACTACCTTCTACAGTGCTAATCAACCCAAATGCAATTGCAAGCCTTTCACT ATGGTAAGACAGCATTTCTTCTTTTTGCTCAATTTCAACATCGTGCAAAGCGAATTGTTGATCAGGAACATAGCCTAATT CCTTTAACTTCACACCTAACCAATCTAGCTTCTGATAAATTTGCTCAGCAAGAGGATGTGACCTATCTGCAGAGAGAAAC TCATGCCTTGTTCCTTTTAAGGTTACCCAACTGGAACCTGGTTGTTTTACAACTCCATTATGCTTCATTCTTTTCCTTAT CAAAGCAACTTCAGACCATCTTCTGGAAGATGCATACAAGTTTGATAGCAACACATATGCAGCACTACAATCTGGCTCCA TTTCAAATATCTGTTTTGCAGCTCTTTCGGCTATGTCTAAATTAGAATGCACCTTGCATGCACTCAGCAAAACCAGCCAA ACCATTGAATTCGCTTTCACGGGCATGCTCATCACCAGTGCTTCTGCTTCTTCCAGCTCTGCGCACCGGCCGAGTACATC CACCATACATGCATAGTGCTCAATTGTCAGTGTAATAGATCTTTTCTGCCCAAAGTATCTGAAAAAACGCCTTGCTTTCT GTAACATCCCGGAACGACTACAAGCAGAAAGTAAACCTGTTAATGTAATTTCATCTGGATCAACCCTTCCATCACGTAGC ATCTGGTTAAAGATTGCCAAAGCACACATGCCATATCCGTGCTGGGCACAACCACCGATAACCGAGTTCCACGAGACAAT GTTTCTCTCACGAATTCCCTCAAACACATAGATGGCATCACCAATATAACCGCATTTACTATACATGACAACAAGAGAAT TTCCCACATATACACCATTTTCCAGACCCATCTTCATTGCTGCAGCATGGATCACTCTCCCCCTCTCAAGATCCCCCAAT CCACAACATGAATTCAAAGCACTGGTGTAAGAAGACTCATTTGGTACCACACTGACTCTCATCATGTCTTCAAAGACCCT CAATGCTTCTTCAGGCTTATTATTCAAACCATAACCTGTAACAAGAGCTGTCCACACCACCACATTCTTACTCACTGTCT CATAAAAAACCTCCAAAGCACTCTCCATTCGTTTGCAGCTAGCATAAAACGTGACAAGCGAAGCAGACACAAACTCATCC AAACAACAACTACCTAATTTGAACATAGAACAGTGAATTTGAAGACCCAGATGCAAAGCTGAAATCTTTGCAGCAGCAGA CAACCCACAAACCAATGTGGTGGAAGAGGGGTTGACCCCAGAAGCCACCATGCTCTGAAAAAACACCAACGCTTGTTCAC TCCTTCCATTATGATCAAGCCCAGCAATAATGGAAGTCCAAGAAATCACGTCACGCGAAGGCATTTGATCAAACAACCGC AGCGCATCATCAACTCTGCCATTGGCAAAGTACCCATGAACCATCGCATTCCACGCCGGCACATCCCTGACCTCAATGGG CATTTCCCAGAACAATGCCTCAGCATCCTCAACCTTTCCAAATCGCAAGAGGCCGTCAATGAGGGTGGTCCACGACACGG CAGTTCTGCTGGGCATTTCGTCGAACAGGTTCCGGGCGGTCCGGAAATCACCACATTGAATACAGGCCTTGATAATGGAG TTCCAGGAGACTACATCCTTGTCGGGGATTCGGCGAAAGAGGTCAATGGCCTCCGGGAGACGACGGTGGCGGGCGTAAGC GAGTAGCATGATGGTGGAGATGGTCACGTGAGGGGAAGGAATTTGGTTGAAGATGGCACGAGCTTGATGTAGATTTTGAT TGTTGAGGTGATGAAGAAGAAGAGGTTTGAGTTTGGATACACAACATGGCGAGGAAGAAGAAGAAGAAGAGAGTTTAGCA GCGGTTACAGTCACAGATGATGCTAAACGATACTGTGCAATGTTTCGAGTTGGAAGGGAAAATGGTGATTTTGGCATCAA GATTCAAGAATGCTCCAAAACC 

CDS sequence (LotjaGi4g1v0385400.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGTCTGGCTTTGAGGTGGGGATTGGAAAACTATACACTAACATCCGTGGCAAAGTTGCATCTTCCAAAAATCTAGATGA ACTCAACGAAATTTTGGTCAAGGATATAAAGATGCTACTTGCAATACAGGAGGATAAAGAGAGGCAAGTTCAAAGAAACA AACAGAAAGATACCACTAATGCTTACAAACTATGGACAAACCTGGTATCAAAGGCTGCAGGAGAAGTGCAGAAACTGATA ACTGAATATGATACAGAAAGCCTGCCTTGGTGGTGTATTCTAAGACGATCACGTCTGAGTGAAAAGATGACCAAAATGTA CAATTGTGTTCATGGACTAATGACAGATGCACACTCAAGAGATTTTCTAGTTGATAAACTGCCAGAGCGTGTCTTGAAGG AGCTAGGTGTTCCACATATAAGTGGATATCCAACCCTACAAATTTCCTTGGAAAAGATTCTTGGTTTCCTAAAAAACAGT AAGATCAAAGTTATTGGAGTGTGTGGAACAAAAGGGGTGGGAAAAACAACAATACTGCACAACCTAAACAACAACGAAGA GGTTGCTAAAATGTTTGATATTGTCATTTTTGTGAGAATCACAGCTGATGAGGGAGATGATCAGAAGATTCAAGAGAAAA TTGCAAATAGATTGATGCTCGACATAACGACCATCCAGGACCATGCTGATGTTGCAAGAACAATTTACAATGATCTAGCA AACAAGAAGTATTTATTGATTCTGGATGGGGTTGTAGGCCCCACTGATTTTGAGCATTTGGGAATTCCAAGTGATAAAAA TGGCAGTAAGGTGGTGATTTCCAGTCAATTCCTTCGAGATTGTAAGTTGAATGGGGTGGAAAGGGTCATCAAAGTCAAAG AGCTATCTCCTGATGAAGCATGGAAGATGTTTAGAGATATTGTCTGTGACAATGCCACTAGTCATATGATTGATTCCCCT GATATCCAACCTATTGCTCACCTTGTATGTAACAGGTGCTCTAGGCTTCCACTTCTCATTCACAAAATAGCAAACTCTTT TAAATTGAAAGGTTCCGCTTCTAGTTGGTGGGCAGGGCTTGAGGATCTTAAACCATGGCCAGAACTTCAAAATCAAGGTT TGAAAGAGTTGTTCTCATTCTTGAAATTCTGTTATGATGAACTGAAAGATGAAAAGAAACAAAAATGTTTTCTATACACA TCAATGTACCCCACAGAAAACAAGATTTACACCGATTATTTAGTTGAGTGTTGGGCAGCACAAGGCTTACTCGGTGATAT AAATGATGCAAGGCGATATCGAAGTGCACGCAACCGTGGTATTGACATATTAGAGCACCTTACTGATGTCTCTTTGCTAG AGAAGGGGGAGCAGATGACATATGTCAAGATGAATGATTGTATGAGACAACTTGCCTTATTCATATCCTCTAAAGATCCT GAGTGTAGCTTTTACCTCCAAGAAAGGGAAGAAACTGAAAATGTCTCAAATTCAAGAGCTTGGCAGCAGGTTAAGTGGGT CTCTATGATTGATAGAAAGATGCTCGATTTACCTGCAAACCAAGATTTCAGCATGGTTTTGACATTATTGCTGCAAAAGA ATCCAGAGCTGACTACAATACCTCAAACATTTTTTGAGAGCATGAACACTCTTCTCTTGTTAGACTTGTATGGTACCGGA ATTAGAGAGCTACCATCATCTCTATCAAAATTGACCTGTCTCAGGGCTTTATTTCTGAACAATTGTGTGTTTTTAAGATC ATTGCCATCTGAAATAGGATCATTTCAATGGCTAGAGGTCCTTGACATTCTTGACACCAAAGTGCCTTTCATACCTATCC ATATCGGATATTTGAATAAGCTAAGATGCTTGCGAATCTCATTCATTGCAAGTGATGAAGAAAATAAAGTTGAAAATTTT CATGTGATCTCAAAGCTCCAGAGGTTAGAAGAATTAACCATTCAAGTCATAAGCTATGAGCAATGGTCTAATGATGCTGA AGGAGTCCTACAACAGGTGGCTTTGTTGGAAAATTTAACTACTCTCAAGTGTTGCTTTCCCTCCCCAGACATTCTTAGGA ACTTTCTTCAGACAAGCAAATCATGGAGAGGTTGTGAGAAAGAAATATCATTCAGATTCTTTGTTGGATGCCAAAACTCA AGACGACCTCAAATACTTGGATCCTTTGAGCATAAAATTACAAATTACTTGAAGTATTGCAATGGTGAACTGAAGGACGA CTTCACAATTAGTGAGATACTACCTAATACTGATGCTTTGGAATTAATTTGCCACAAAGATATTAGAAGGTTATCAAACT TTGTTGGAACAAGGCCTTTGAATCGCATCCGTGGCCTTTTGATTGAAAAATGCAACAAATTTTCCACAATTGTGGTGGAC GATTTAAGTTGCAACCCCATAAATGGAATCCAATCAGAAAACAGAGCCCTCTTGCCAAATTTGGAGCAATTGTATTTGGA AAATTTGCTCAATTTAACATGTGCTTTTAGGGGTCCCGTGCATATTGGAACACTTGCCAAATTACAAATTTTGTCATTGA AGAACTGTCCATACCTGAGTGAAATTTTCAGCAATGGAGCACTTCAACATTTTTCAGAACTTCAGAAGCTGAAAATTGAA GATTGTGCAAAACTTGAAGAACTTATTGTTCTTAGAGAAGGCTCTCAAGGAGAAAGGCACGTCCTTCCCAAACTAGAGAT GCTACTGCTGGTTAACTTGCCTAACTTCAAAAGTATATGCTCAAACCAGACATTGGATTGGCCCTCTTTAGAGCTACTAA GGATACATAGATGTCCTAATTTGAAAACTTTACCATTTGATGCTAGCAACGCAACCAACTTGAGGTCCATTGAAGGGGAG CAAAAATGGTGGGATGAGTTGAAATGGACAAACAATAGCAATGAGGAACGCCTCTTACATCTTGCATGCCCTAGTGCCAA AAGGCAAAGGTGA 

Protein sequence (LotjaGi4g1v0385400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MSGFEVGIGKLYTNIRGKVASSKNLDELNEILVKDIKMLLAIQEDKERQVQRNKQKDTTNAYKLWTNLVSKAAGEVQKLI TEYDTESLPWWCILRRSRLSEKMTKMYNCVHGLMTDAHSRDFLVDKLPERVLKELGVPHISGYPTLQISLEKILGFLKNS KIKVIGVCGTKGVGKTTILHNLNNNEEVAKMFDIVIFVRITADEGDDQKIQEKIANRLMLDITTIQDHADVARTIYNDLA NKKYLLILDGVVGPTDFEHLGIPSDKNGSKVVISSQFLRDCKLNGVERVIKVKELSPDEAWKMFRDIVCDNATSHMIDSP DIQPIAHLVCNRCSRLPLLIHKIANSFKLKGSASSWWAGLEDLKPWPELQNQGLKELFSFLKFCYDELKDEKKQKCFLYT SMYPTENKIYTDYLVECWAAQGLLGDINDARRYRSARNRGIDILEHLTDVSLLEKGEQMTYVKMNDCMRQLALFISSKDP ECSFYLQEREETENVSNSRAWQQVKWVSMIDRKMLDLPANQDFSMVLTLLLQKNPELTTIPQTFFESMNTLLLLDLYGTG IRELPSSLSKLTCLRALFLNNCVFLRSLPSEIGSFQWLEVLDILDTKVPFIPIHIGYLNKLRCLRISFIASDEENKVENF HVISKLQRLEELTIQVISYEQWSNDAEGVLQQVALLENLTTLKCCFPSPDILRNFLQTSKSWRGCEKEISFRFFVGCQNS RRPQILGSFEHKITNYLKYCNGELKDDFTISEILPNTDALELICHKDIRRLSNFVGTRPLNRIRGLLIEKCNKFSTIVVD DLSCNPINGIQSENRALLPNLEQLYLENLLNLTCAFRGPVHIGTLAKLQILSLKNCPYLSEIFSNGALQHFSELQKLKIE DCAKLEELIVLREGSQGERHVLPKLEMLLLVNLPNFKSICSNQTLDWPSLELLRIHRCPNLKTLPFDASNATNLRSIEGE QKWWDELKWTNNSNEERLLHLACPSAKRQR 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 24 916 893 1.4E-176
PANTHER 24 916 893 1.4E-176
Gene3D 141 287 147 5.1E-17
SUPERFAMILY 141 399 259 1.47E-34
Pfam 149 387 239 2.8E-32
PRINTS 164 179 16 1.8E-12
PRINTS 238 252 15 1.8E-12
PRINTS 333 347 15 1.8E-12
Gene3D 458 709 252 1.1E-18
SUPERFAMILY 464 961 498 1.06E-25
Gene3D 754 976 223 6.2E-16
PRINTS 843 859 17 1.8E-12

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function ADP binding Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate.

Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0385400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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