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LotjaGi4g1v0387200.2

Overview

Field Value
Gene ID LotjaGi4g1v0387200
Transcript ID LotjaGi4g1v0387200.2
Related isoforms 2
Lotus japonicus genome version Gifu v1.2
Description Protein kinase family protein; TAIR: AT2G43850.1 Integrin-linked protein kinase family; Swiss-Prot: sp|Q05609|CTR1_ARATH Serine/threonine-protein kinase CTR1; TrEMBL-Plants: tr|K7KQN9|K7KQN9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0387200
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr4:76579938..76584714) extracted from Lotus japonicus Gifu genome v1.2.

TTCGAGACCAAAAAAGAAAACAATACGAAACAAAAGAGATTTTAACGGCTTTTTTCCCGCAAATGTGTGGAATTCATCGG GATCCAACTAAAAAATATCCTAATTAAACAAAAAACAAATAATTCCCACTATTTTTCTTTCCATTTTCCCTCACAGATTA TCACAAAACACAAAAAATTCAATTCATTTTCTTCTCTTTCTCTTTGATGCAGCATGTAAAATCCCCTCTCTCTCTCTTCA ATTTCCCAATCGCGATCTAGAGAGAGAGAGGATGGAGAGCATTGCCGCGCAGTTAAAGCGCGGCATCTCGCGGCAGTTCT CGTCGGGTTCCCTCCGGAAAACCCTCAGCCGCCAGTTCACGCGGCAAGCCTCCCTCGATCCGCGCCGGAACAATCTCCGC TTCAGCTTCGGCCGCCAATCCTCCCTCGACCCGATCCGCCGCAGCCCCGTCGATGACGACGACGCTGAACTCACCGTGCC GGAGAATCTCGACTCCACCATGCAGTTACTCTTCATGGCTTGCCGTGGAGATGTTAGGGGAGTCGAGGACTTGCTCAACG AAGGCATCGATGTTAACAGCATTGACCTCGACGGTCGCACCGCGCTTCACATCGCCGCATGTGAGGGCCACGTTGAAGTC GCCGCGCTTCTTCTCAGCCGTAAGGCTAACATCGACGCTCGTGATCGTTGGGGCAGTACGGTAATTTCATCCTTCTCAAT TCTCATCATGTATTGTATGGTTATAATATTGCTATAATTGGAAATTCTGTTTACAATTCAGCTCGTGATTCTTGATTTGC AGGCAGCGGCTGATGCAAAATACTATGGAAATACAGAGGTTTATTATATGTTGAAGGCTCGCGGAGCGAAAGTGCCGGTA ATTTATCATTCTCTGCATGTTTTATGTGTTGATGAATTCATGAATATGTATATGTAGCTAACTGTGAATGTGTATTAATA TGTGTTGAATTGAATTGAGGGAGTTTTTGATTAATATGTATCTTTGATGTGGTTAGAAAACCAGGAAGACTCCAATGACT GTTGCGAATCCTCGCGAAGTTCCGGAATATGAACTCAATCCTTTGGAGCTGCAGGTTCGGAAGAGTGATGGTATTTCAAA GGTGTGTTTTTCTTTTTTGGTATATTTTACAACTTGGGTTCGACTAGGACACGGTTTCTGTTTTTAGAAATGTTTATTGA TGCTTGCAACTGATATAACTATTGTGACTCTTGGGGCAGTTTTGTTTTCAAGTTTTTCAATTGAGGTGGTGGGCTGTAAC ATTTTGCTTTAGTAATGTAATATGTGTAGTAACTTGGGAATTGGGATATGATGGTTTCCAGGGTCCATTGAATTTTTACC TTGCCATATTCTTCTCAATGAGCTATGTGCACTGGGTTCTCTTTAGCAACCATGTGGATGTGGATCATTCATTTTTTTCA ATCTTTGATTTTTGTTTATAGTTGGTGCCTCATGTGTTGATGTTATGTGTATTAGGAAAAGTTGCTGATAAGTGTTGGAA GGGAGTTTATGGATCTACAAGCATCTGACACTATTTAGTTACATAATGGCACATATATTAAAATTGGTTGCTTGTAGTTC TTCACTCTTGTTTGATCAATCTCTTTGTAGGGAGTGTATCAAGTAGCTAAGTGGAATGGCACAAAGGTTGCAGTGAAGAT ACTTGACAAGGACCATTATTCAGATCCTGAGAGAATGTACGTATATACTCCTAAGCAATGAAGCTTGTTTGTTTGAGTGT CTGCATGATATGCTTCTTGACTGTCAACTGGATTCTTTGATGCTACTTGGCTAAGTTTTTGTCTGACTGCATAATCACGC ACTATTTTTCACTTTGATTTTTGGTTAAGTGTGGTTTAAATTGCTGCTTATTTCTGTAATTTATTACTGAACCTCGGCAC TGAATTTTTTCTATAATTCACTCAGAAATGCTTTCAAACATGAGCTCACATTATTAGAAAGGGTACGGCATCCTAATGTG GTCCAGTTTGTTGGAGCTGTCACTCAGAATATACCTATGATGATTGTTCGAGAGTACCATGCTAAGGTAACCTTTCCATC TGTCCCTCTCATAGCATTGCAAAGGGGGATTTGTTTTTTTTTTTTAGGGTACAGACTAGGTGGAGCATTAGAGATGGTAA ATCTTAGCGATAAGAGAAACTTTAGTGGAAGTAGCATAGTAAACCCCTATTTACAAATACATCATTGCTCATATTGATGT TGATTTTACAGGGTGACCTAGCAGGCTATCTTCAAAAGAAAGGGCGTTTGTCCCCATCAAAAGTTCTACGGTTTGCTCTT GATGTTGCTAGGCAAGTAACCATTTTAAGGAACTATATTTTATGAAATCTTTGTGAAAACGTCTTCAAGGTTGTTTATAT AAGATAACTTGATAATTTGTTCTTAACAGGGGCATGAACTATCTTCATGAGTGCAAACCCGAACCAATTATCCACTGTGA TTTAAAGCCAAAGTAAGACCACTTAATACAATTTGGTGTATACTTATGTGTGTATTTTGAATGAGATTTTTCTCATTGGG ATTGCTGTTTCTTTAATATATGAAATTTCGGTAAGGTGCCAGAAATATTTTGCTGGATAGTGGAGGGCAATTGAAGATAG CTGGATTTGGCAATGTGACATTATCGCTAATCTCACCTGATGAAGCAAAGCTGGCAAACCCTGAGGATAACACGGATCTC CTTTCGAGTAAGTTTTTTAGCATATCCAATTTTTTAACTTGGATTTCATCTCCTTCGAAATTGATTAGGTTTTTATTCTT CAGAAAAACAATGCCATGCTTTATGGTTTAATTTAATTATAACGTGTTAAACATACAAGATTTTTGAATGCAATATGAAT TTCCTTTTCAAGAATTGATCGAGTGTACACATTAGGATTGGAGATGACAATTTTTATTAATTAGTGATTTGGCTCTATAA ATTCCAGGCTTGTACGTGGCACCAGAGATTTACAAAGATGATGTGTTTGATAGAAGTGTGGATGCGTATTCTTTTGGTCT TATTGTGTATGAGGTAACTACTTTTTTTCAAGATAGTTTTTCTTCATGAGATTCTTGTTTTTATGGGTTTGGGCTAGTAT CTTGCCTTGCCGTCAGAAGGCACATGTGAAACCGTGATGCTTAGGCTAATGCACTTAAGTAGAAAAAAAATTGCCCTAGC AACCAGCTACAGATTTTTATGCTAGTGGTAAACACTCGATCTACTGGTGGTATTAGAACCAAGGTCATGAGTTAACTCAG AAGGGCAATAGGCCGGGCGCAAGTGCTGGGGGACAGGAGGGGAAGTTTGATGACAATGTTGTCTTTACGTTTTTTTCGTA TGTTTTGTTAGACGTACATATAAAACCATTCATGTGCCTTCATCCAACAACTTAGCTTTTGGTATAGTTGATTTATAACA TGGTATCAGAGTTTCTATGACCAAGTAGTCTAGAGTTCGATCATTGTTGTCCTTATTGTTCATGACATGTTTTATGTGTT ATTTTGCTGATAGTTCTATTTAGTGATCTTATTAGTTGGGACTAAGTTCATAAAATTGTAGTTTGTTAATGTTATTGATG CACTTGCTTGTTTCAAAGTAAAAAGTTAGTAGCTTTTCTAAATGTATTTACTATTCTTGAGACAGTGATTTAGTTTTGAG AGCATTTTGATTTTTGAATTTATCAATCTGGTTTTCATGTATTAGTTGTCTATAAATTGGAATTCAACAATTTTTAAAAT TTCTTTTATGAACCCCAGATGATAGAGGGTACACAGCCCTTCCATCCCAGGCCTGCGGAGGAGGCTGTAAAACTGATGTG CTTAGAAAGGAAAAGACCGCAATTCAAGATCAAAACAAAAAGTTATCCTCCAGATTTGAAAGAGTTAGTCAAATTTAAAT TAAAAATTCAGCCTTCAAGCTTCACTTTATTTAAAAGCTGTCTAACTATCATGGTGTATGCAGGTTGATTGAGGAATGTT GGGATCCAGAACCTGTTGTCAGGCCAACATTTTCGCAGGTCATTGTACGATTGGACAAAATTGTTGCAAATTGCTCAAAG CAAGGGTGGTGGAAAGATACTTTTAAACTTCCTTGGTATGTTTCCTAGACTGATTATGTCCTTGAGCAAAACTTTAATTT CTTTGGAGGAATTCAAAGTGGTAGAGTTTTCAAGTATACCTTGAAATACTTCTAAACTTTGTGAGGTGGGAATATGTGCA GGAAATAAATAAATAACAAAGGACTCACCATCATAGAAAGGAAGAGATGCAGATCAGAGTTACATACTCAAAACCAACTT GTGAGCATCATGTTGGTGTACTGTTAATAGCCATCCTCAAAACCAACTTGAGCTCAAAATTAAGCATGAAAATGAATTTC TACAGTTTCACTTTTGTTCTCTGTCTGCTAGAGGGCCTGGAACAGCTCCTCTCTGTAAAATTTGGTCAAGAACATCTTTT CTAAGAAATTTTCTGATGGACAATGTGTTTTCTATACTTACTAATTGACCACCATGTGCTGCAAGTTGGAAATGTGTACT ATTTGTGACATTATGCAGGCGAATGCTAATAAGAATAATGATAAGATATATATGGGACATCATTTGACACCAGGTGTTGA ACTTGTAGACTTGCACTCTCATCGGTTGCCCAAATCCTTGTTTTCTTTTCTTTTTTGTTAAGCAGAACTGCAGAAGGACA AGTAGAATATTTAGTTGGTTATTTTTTTCAGATCTAAAAGCCATTTTGCTGATTGAT
Download Genomic Sequence

CDS sequence (LotjaGi4g1v0387200.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGACTGTTGCGAATCCTCGCGAAGTTCCGGAATATGAACTCAATCCTTTGGAGCTGCAGGTTCGGAAGAGTGATGGTAT TTCAAAGGGAGTGTATCAAGTAGCTAAGTGGAATGGCACAAAGGTTGCAGTGAAGATACTTGACAAGGACCATTATTCAG ATCCTGAGAGAATAAATGCTTTCAAACATGAGCTCACATTATTAGAAAGGGTACGGCATCCTAATGTGGTCCAGTTTGTT GGAGCTGTCACTCAGAATATACCTATGATGATTGTTCGAGAGTACCATGCTAAGGGTGACCTAGCAGGCTATCTTCAAAA GAAAGGGCGTTTGTCCCCATCAAAAGTTCTACGGTTTGCTCTTGATGTTGCTAGGGGCATGAACTATCTTCATGAGTGCA AACCCGAACCAATTATCCACTGTGATTTAAAGCCAAAAAATATTTTGCTGGATAGTGGAGGGCAATTGAAGATAGCTGGA TTTGGCAATGTGACATTATCGCTAATCTCACCTGATGAAGCAAAGCTGGCAAACCCTGAGGATAACACGGATCTCCTTTC GAGCTTGTACGTGGCACCAGAGATTTACAAAGATGATGTGTTTGATAGAAGTGTGGATGCGTATTCTTTTGGTCTTATTG TGTATGAGATGATAGAGGGTACACAGCCCTTCCATCCCAGGCCTGCGGAGGAGGCTGTAAAACTGATGTGCTTAGAAAGG AAAAGACCGCAATTCAAGATCAAAACAAAAAGTTATCCTCCAGATTTGAAAGAGTTGATTGAGGAATGTTGGGATCCAGA ACCTGTTGTCAGGCCAACATTTTCGCAGGTCATTGTACGATTGGACAAAATTGTTGCAAATTGCTCAAAGCAAGGGTGGT GGAAAGATACTTTTAAACTTCCTTGGAAATAA
Download CDS Sequence

Protein sequence (LotjaGi4g1v0387200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MTVANPREVPEYELNPLELQVRKSDGISKGVYQVAKWNGTKVAVKILDKDHYSDPERINAFKHELTLLERVRHPNVVQFV GAVTQNIPMMIVREYHAKGDLAGYLQKKGRLSPSKVLRFALDVARGMNYLHECKPEPIIHCDLKPKNILLDSGGQLKIAG FGNVTLSLISPDEAKLANPEDNTDLLSSLYVAPEIYKDDVFDRSVDAYSFGLIVYEMIEGTQPFHPRPAEEAVKLMCLER KRPQFKIKTKSYPPDLKELIEECWDPEPVVRPTFSQVIVRLDKIVANCSKQGWWKDTFKLPWK
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR44329
1 303 303 1.2E-165 –
PANTHER
PTHR44329:SF7
1 303 303 1.2E-165 –
PIRSF
PIRSF000654
1 302 302 3.4E-140 –
Gene3D
G3DSA:3.30.200.20
15 97 83 1.6E-19 –
ProSiteProfiles
PS50011
17 285 269 37.912
IPR000719
SMART
SM00220
21 285 265 7.9E-39
IPR000719
Pfam
PF07714
29 280 252 6.3E-49
IPR001245
SUPERFAMILY
SSF56112
31 281 251 2.15E-62
IPR011009
PRINTS
PR00109
93 106 14 6.6E-10
IPR001245
Gene3D
G3DSA:1.10.510.10
98 297 200 2.7E-47 –
PRINTS
PR00109
132 150 19 6.6E-10
IPR001245
ProSitePatterns
PS00108
138 150 13 -
IPR008271
PRINTS
PR00109
205 227 23 6.6E-10
IPR001245
PRINTS
PR00109
252 274 23 6.6E-10
IPR001245

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0387200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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