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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0387400 |
| Transcript ID | LotjaGi4g1v0387400.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Guanosine nucleotide diphosphate dissociation inhibitor; TAIR: AT2G44100.1 guanosine nucleotide diphosphate dissociation inhibitor 1; Swiss-Prot: sp|Q96254|GDI1_ARATH Guanosine nucleotide diphosphate dissociation inhibitor 1; TrEMBL-Plants: tr|O65744|O65744_CICAR Guanosine nucleotide diphosphate dissociation inhibitor; Found in the gene: LotjaGi4g1v0387400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:76597517..76601688) extracted from Lotus japonicus Gifu genome v1.2.
ATGGATGAAGAGTACGATGTCATCGTGCTAGGCACTGGTCTCAAGGAATGCATTCTCAGCGGTCTTCTCTCCGTCGATGG CCTCAAGGTACAATCTCCCGAGATCACCAATCACGATTTGCTTCCTTCTTGTTTTTTCTCGAATCGAAACAACAATCTGT TATCGATGTTCAATCCACGTTCTTCAAATCGAATCGGCGGTGATGTGTTTGTTTGTTTGTTTGTTTGTTCGTTCAGGTTC TTCATATGGATAGGAATGACTACTACGGAGGAGAATCTACCTCGCTCAATCTTAATCAGGTACTTTATTCCTCTTCAACT ATTATCATTCAAGTGTCAAATGATGATTTGATTGATGGTTTCTCTGTAATCTTCAGCTCTGGAAGAGATTCAGAGGAGAA GACAAGCCTCCTCCACATTTGGGCTCTAGCAAGGACTACAATATCGATATGAACCCTAAGGTATTCATTGATTTGGTCTA CTGATGCATGTGCTCTTTCTATATATATAAGCATATGTGATATGATTCTCCATGTCTGACTCTTTTTTTTTTCTTATGGG GTGGCTAGATTATTATGGATAATGGCAATTTAGTCTAGTGATGCATATGCTCTTTCTATATATTTATACATATGTGATAT GATTACTCATGTCTGACTCTTTTTTTTCTTCTGGGGTGGCTAGTTTATTATGGCTAATGGCAATCTAGTGCGGGTTCTCA TTCATACTGATGTTACCAAGTATCTATATTTCAAAGCTGTGGATGGGAGCTTTGTCTTTAACAAAGGAAAGGTATGCTTG AGTTATTTCTTGTCGATCATGTTGGAAAGTTTAGTTTGGTTTTGATTTTGTTTTACATGCATTAATTGCTCTGTTGTTGT AGGTTCACAAGGTGCCTTCAAATGACATGGAGGCCTTGAAGTCCCCGCTTATGGGAATATTTGAAAAACGCCGGGCCCGC AAGTTCTTCATTTATGTTCAAGATTATGATGAGAAGGATCCTAAGACACACGATGGGATGGACTTGACCAGAGTGACTAC TAAGGAACTGATAGCGTATGTATACACTTGTTTTCTTGTCCATTCAACAAGCCAATTTTGTATTTGCCTAGATCCTGGGC ATAAAACATTTGGAAATTGGTATGAGAATAATTACGATGTCTTATTCACCTTAATATGGCATCATATTTAATTTTTCAGT CATATAGACTTGATAGTGAAATGCAATTGTACGATCTAGTTCCGTAAGTCTGTCATATATATATATATATGTGTGTGTGT GCATATGACTTTGAAAACATGATGGTGACATTTTTGTAATTTAAATGAAAAACAAGACGTGAAAACAAAAAAATAATATC TGAAACTAAATATGCTTGAAATGTGTGAGAGTTTAATCTTATTTGGCATTTTTTATTAGTGTACTGTGTACATATATACT TGCATGTCATTTAGTTACTATATTTTATATAGAGAAGGAAATTAGAACTTTGTGTGGATGGAGTCATGGAATATTTTGCT TTTGTTGTTGACCTGTTACAGAAAATTTGGCCTTGATGATAACACGATAGACTTCATTGGCCATTCTTTGGCGCTTCATA GAGATGATCGCTACTTGCATGAACCAGCACTGGAAACTGTAAAGAGAATGAAGGTAAGTGTACTGGTTTATTAGCACCTG TTAATATTTTTCAATTATAATTGGAAGTTTGATCAAATTCCATTTGGTTCCTAAGCTATATTTGTGTCCTTATTTGTGCT TATATTTCCTACTTGTAGTTATATGCAGAGTCTCTTGCACGCTTTCAAGGGGGATCACCTTACATATATCCTTTGTATGG TTTAGGGGAACTTCCCCAGGTATTCATAATTATATCTATATTCACGCATCGGCTTCATCTCATTTTAGGAATGTAGTGTT GGAATTCGTTTTGCTCAGGTTTTTTAATTCTTTTTTTTTTGGTTCAGGGTTTTGCACGGCTTAGTGCTGTTTATGGTGGA ACATACATGTTGAATAAACCTGAATGCAAGGTAGATATACTCTACTATACTTATATGCAACCTCCCTCCCCAGTAGTGTA AGACTTGCCACACTTGAAGAATTACAACTTTTAATAAAAAAATTGTTCATCGATCCAATTTCTGGCCCATAACTATGTTT TAGATCTTAAATACCAAATTTTAGAAAGTTTGAATAAAATTATATCATAAAATGGTTTATATTTTAATTTCTTTGGATAA GTATGTTTTAATGCTAGTTTTTTGGTGCTGTGTATAAATAAAGAAAAGACAGAAAACTAAAAAAAAAAACTGGCGACAGT TTTTGGGTGCTGTATACCAAATGATAGATTGAAGATATTCTTACTGAGTCAAAAACTATGTTGAATTATGTGAAATTCTA GCTTGATGCTAAATAACTTGCAAATAATTATTATACTTATTATTTTGATTTTGTAGGTGAACAACCTGCTAATATTCTTT TGGATATAATCTTCATTTTGCTTGAATTCCAGGTTGAGTTTGATGAGGAAGGGAAGGTTGTTGGTGTCACATCTGAAGGA GAAACTGCAAAATGCAAAAAAGTTGTTTGTGATCCATCATACTTACCCAGCAAGGTAATATAAATTAACTCTAATTTGAC TTTTTGCATCTCTGTAGGTGTTGTGAGAGTGAAATTTTCTTGGTTCTTGAAGTCTTACGAGCTATTCTAAAAAATTGGGA AAAGAGTGTACAACTACGCTAAATTTTATGCTTTTATGAATCAATTAAGAAATTAACCCCCATTGATTAATAGGTCATAA CAATAGTAGTTCTGGTATTAATTGGTATGAAGTGAATGCCAGTGCCTATTTGCAATAACCAGAGTTTACAGTGGCCGCTG TTCTCTAAAATATACATTACCAGCTTTCTTATTGAAAGGAGTTTGTAAATGCTGCTTTTGAAAGAAAAAAATTAATGATC AATGGTGGACTGCTTTTAATTTCCAAATTGATTCTTGATGCGAGACTCCATCCTTCTTAATAAAAATTGTAACCATTTCA ACAGGTGAGGAAGGTTGGTAAAGTTGCAAGGGCAATATGCATCATGAGCCACCCAATCCCCAACACCAATGACTCTCCTT CTGTGCAAGTTATTCTACCTCAGAAGCAGTTGGGCAGAAAGTCAGACATGTAAGTTTTCAAGCAGTACGTTGAATAATAG ATATTTAATCAAATGTGTTGTATCCACTATCCATTTCTTGCAATATACTGGTGCAGCAGATCACCATTATTGATCCTGCA GTTGGGACCGTAAATTAGCAAGGGCAAGCTTTCTTAACTGAAGCTAAGCCCTTCAATTTTTATTGATTTGTTTTTCTCCA GACATAATCAAACACATGAAATAATATTGCTTCTTTAGAAATCCTTTTAGCACTTACTAATAAGTTTATAGTATTCAGTC TTTCTCTTCCTTTTTCACCTATACTTCTTAATTTCAACAACTACAAATGTAATGCTAACCGAAGTGTTATGGAACTTTGC AGTCATTCCAGCTATAGAAGGCATACCAAAAATACGAAGAGCCTAAAATGATTTCATATTTAAAAATTGGAAAAATGAAC ATTATTCTGGCATTTGATTTTCGTTAATTGTAGATATACTTGTATTTTCATAATTTCACTGATGTTTGATTCCATTGTCC TGGGCAGGTACCTATTTTGTTGCTCATATTCTCACAACGTTGCCCCAAAGGGAAAATTTATTGCATTTGTATCAACGGAG GCAGAGACAGATCAGCCTGCAATTGAACTAAAACCCGGAATTGACCTTTTAGGACCTGTTGATGAGATATTTTTTGATAT GTATGACAGATTTGAACCAGTCAATGAACCCTCCTTGGACAACTGCTTCATATCAACAGTGAGTTTACTTTGTCTTTCTT ATATATATATGTATGTATGTATGTATTATTTGGATAGGCCGGCAATGATACATTTATATTTTTTTGACAGAGTTATGATG CTACTACTCACTTTGAGTCAACTGTAGTGGACGTCCTCAACATGTATACAATGATAACTGGAAAGGTGAGTTTTGTGCAT CGGTGCCTACTTGTTTTTGGTGCTTGCATTAACTTGTTAGTGCCACAAATGATGAAAATGACATTGTTCTACTATGTGCA TTTGCTCCCGAA
CDS sequence (LotjaGi4g1v0387400.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATAGGAATGACTACTACGGAGGAGAATCTACCTCGCTCAATCTTAATCAGCTCTGGAAGAGATTCAGAGGAGAAGA CAAGCCTCCTCCACATTTGGGCTCTAGCAAGGACTACAATATCGATATGAACCCTAAGTTTATTATGGCTAATGGCAATC TAGTGCGGGTTCTCATTCATACTGATGTTACCAAGTATCTATATTTCAAAGCTGTGGATGGGAGCTTTGTCTTTAACAAA GGAAAGGTTCACAAGGTGCCTTCAAATGACATGGAGGCCTTGAAGTCCCCGCTTATGGGAATATTTGAAAAACGCCGGGC CCGCAAGTTCTTCATTTATGTTCAAGATTATGATGAGAAGGATCCTAAGACACACGATGGGATGGACTTGACCAGAGTGA CTACTAAGGAACTGATAGCAAAATTTGGCCTTGATGATAACACGATAGACTTCATTGGCCATTCTTTGGCGCTTCATAGA GATGATCGCTACTTGCATGAACCAGCACTGGAAACTGTAAAGAGAATGAAGTTATATGCAGAGTCTCTTGCACGCTTTCA AGGGGGATCACCTTACATATATCCTTTGTATGGTTTAGGGGAACTTCCCCAGGGTTTTGCACGGCTTAGTGCTGTTTATG GTGGAACATACATGTTGAATAAACCTGAATGCAAGGTTGAGTTTGATGAGGAAGGGAAGGTTGTTGGTGTCACATCTGAA GGAGAAACTGCAAAATGCAAAAAAGTTGTTTGTGATCCATCATACTTACCCAGCAAGGTGAGGAAGGTTGGTAAAGTTGC AAGGGCAATATGCATCATGAGCCACCCAATCCCCAACACCAATGACTCTCCTTCTGTGCAAGTTATTCTACCTCAGAAGC AGTTGGGCAGAAAGTCAGACATGTACCTATTTTGTTGCTCATATTCTCACAACGTTGCCCCAAAGGGAAAATTTATTGCA TTTGTATCAACGGAGGCAGAGACAGATCAGCCTGCAATTGAACTAAAACCCGGAATTGACCTTTTAGGACCTGTTGATGA GATATTTTTTGATATGTATGACAGATTTGAACCAGTCAATGAACCCTCCTTGGACAACTGCTTCATATCAACAAGTTATG ATGCTACTACTCACTTTGAGTCAACTGTAGTGGACGTCCTCAACATGTATACAATGATAACTGGAAAGTGCCACAAATGA
Protein sequence (LotjaGi4g1v0387400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDRNDYYGGESTSLNLNQLWKRFRGEDKPPPHLGSSKDYNIDMNPKFIMANGNLVRVLIHTDVTKYLYFKAVDGSFVFNK GKVHKVPSNDMEALKSPLMGIFEKRRARKFFIYVQDYDEKDPKTHDGMDLTRVTTKELIAKFGLDDNTIDFIGHSLALHR DDRYLHEPALETVKRMKLYAESLARFQGGSPYIYPLYGLGELPQGFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSE GETAKCKKVVCDPSYLPSKVRKVGKVARAICIMSHPIPNTNDSPSVQVILPQKQLGRKSDMYLFCCSYSHNVAPKGKFIA FVSTEAETDQPAIELKPGIDLLGPVDEIFFDMYDRFEPVNEPSLDNCFISTSYDATTHFESTVVDVLNMYTMITGKCHK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 395 | 395 | 2.0E-174 | ||
| PANTHER | 1 | 397 | 397 | 1.6E-260 | – | |
| PANTHER | 1 | 397 | 397 | 1.6E-260 | ||
| Pfam | 1 | 396 | 396 | 2.6E-208 | ||
| SUPERFAMILY | 2 | 324 | 323 | 2.14E-47 | ||
| Gene3D | 25 | 365 | 341 | 2.0E-174 | – | |
| PRINTS | 37 | 54 | 18 | 5.7E-47 | ||
| PRINTS | 43 | 56 | 14 | 6.1E-68 | ||
| PRINTS | 54 | 70 | 17 | 5.7E-47 | ||
| PRINTS | 93 | 108 | 16 | 6.1E-68 | ||
| Gene3D | 94 | 199 | 106 | 2.0E-174 | – | |
| PRINTS | 103 | 118 | 16 | 5.7E-47 | ||
| PRINTS | 150 | 164 | 15 | 6.1E-68 | ||
| PRINTS | 180 | 197 | 18 | 5.7E-47 | ||
| PRINTS | 198 | 219 | 22 | 5.7E-47 | ||
| PRINTS | 248 | 262 | 15 | 6.1E-68 | ||
| PRINTS | 291 | 307 | 17 | 6.1E-68 | ||
| PRINTS | 316 | 334 | 19 | 6.1E-68 | ||
| PRINTS | 349 | 368 | 20 | 6.1E-68 | ||
| SUPERFAMILY | 358 | 396 | 39 | 1.68E-11 | ||
| PRINTS | 370 | 390 | 21 | 6.1E-68 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GDP-dissociation inhibitor activity | Prevents the dissociation of GDP from a GTPase, thereby preventing GTP from binding. | ||
| Molecular function | Rab GDP-dissociation inhibitor activity | Prevents the dissociation of GDP from the small GTPase Rab, thereby preventing GTP from binding. | ||
| Biological process | Small GTPase mediated signal transduction | Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals. | ||
| Biological process | Protein transport | The directed movement of proteins into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. |
Expression pattern of LotjaGi4g1v0387400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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