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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0388500 |
| Transcript ID | LotjaGi4g1v0388500.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 11S globulin seed storage protein 2; TAIR: AT1G07750.1 RmlC-like cupins superfamily protein; Swiss-Prot: sp|P07730|GLUA2_ORYSJ Glutelin type-A 2; TrEMBL-Plants: tr|A0A0B2PFU4|A0A0B2PFU4_GLYSO Glutelin type-A 2; Found in the gene: LotjaGi4g1v0388500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:76684938..76688592) extracted from Lotus japonicus Gifu genome v1.2.
ACAATATCCTACCTACAACAGTACAACACACATCCACAACCTCAAAAATCACCAACCTTCATTACGCACTTGGCACTCAC CAGAGTCACAACCAAACCTCATTCTCCTTCTCTCTTGGTCATAAATGTGAGCTACAAGAGCAAAGCTAAGAATTTCACCA TGTTCATAGACGAAGGATCTCCCCACATTGCTGAGTTCTTCTTTGCTCTGTTTTTTTTAGTCTCTTGATTCACTAAAAAA GGAAGAAGGCGTGGAAGAAGGTGGTTTGTGCAAAGTCTTTATAGTATCTACTTCCACCTAGATCACAGGTATGTTCAAGA TTGGTTTCTATGTATTTATGGTTTTTCTAATCTTGTATATCAAAGATCAAGAGTTGCTTATGTACTATGAGTGCAGAATT TTCATTTGTCCATCAGCTGAATTAGATAGCCTGAGCTTTTGAGATGCACTGAATATGAAAGATCTAACTTTTAAGATGTG CTTCAACTGAAAATAAATAACAAATCTATAAAAACAGAAAGAAAAAAATTATCAACGAATCTATAAGAGTTACTTCATTC AAAAAAAATTACAAATATAATTGGAGCACTAACTAATTTATTTGAAATAATGCCTATGATGATGAGCAAATTAAAGGGAA AAAAAAAAATCAATGGAGATGGACTTAACACCAAAGACAGCACAACCATTCATTGAAGCAGATGGTGGTAGTTACTACAC ATGGACAAGTTCTCAAGTTCCACTTCTGGCTAAGACCAATGTGGGTGCTGGTCGCTTTGTGCTTCAGCCTAGGGGCCTTG CTCTTCCTCATTATGCAGATATCTCCAAAATTGGTTATATCGTTGAAGGTCAGAGCCTTATCATTTCTAGTTAGTTTTTT TTTTTTTTTTTTTTCTGTACATTAACTTCTAGCATGTTAACTCATTGTTTTTCTTAAGAATCAATTCTGACATACAAAAT TTAAAATTTAGATTTACTTCATTTTCAGTCAAATTTTGCACTTTTGAAAAGCGATTTTTTTTATGTGTTACTAAAGTTCA AGTTTCGGAGTGTATTTATATTTTTGAAAGTGAATCTAACACAATTTGTTTTCCCAAAACTTCTGAAAGTACGAAACTTA ATTGCAGTAGCTGCAGGAACCAACTACTGCAATGAATCTAGATCACAGAAACTGCTCACAATTTTTTTTGTTCTCATAAT TAATTTTGGCTTTAGGATAATTGTGCGAGGATTTTCAAACATGTTATTAGTAATATGTTTGGTTGTGAGAAGAGATAATG CGAGGAGAATATATGATGACATTATTGACATGTAAAGTAGTGAGAAACAATGGTAATTGATCTTTAGCCCGTTTGGTTTC CTGTTTGCGTATCACCTAAGATATAAGATTCTACCATGATGATACAAACATGGATGGATGTTGAGTTCAACACAAATCCA AACATACATTTACATGTTCAATCATTTAATGAACTCACTGATGTATAATTGTATTAATTCTCTGATAACTTTGCTAATTA CTGAGTCAAACTTCCTTAATTGCATAACAAACATGCAGGAACTGATGGCGTAGTTGGGATGATACTTCCCAACACAGGAA AAGAGGTGGTTTTGAAGCTCAAGCAGGGAGATGTGATACCAGTACCTCTTGGAGCAATTTCATGGTGGTTCAATGATGGA GACTCAGATCTCATCATTACTTTTCTTGGGGACACTTCAAACGCTCATGTTCCTGGCGATTTCTCCTATTTCTTTCTATC TGGAGTTCAAGGAATTCTAGGAGCTTTCTCCACAGAGCTAACAAGCAAAGCGTATCACTTGAACAATGATGATGAGGTGA GCAAGTTAACCAAAAGCCAAAATGAGGTTGTGATAATCAAGCTAGATAAAAACCAACCCATGCCAAAACCCCAAATTAAC CTCACCAAAGAGCTAGTCTATGACATAGATGTTGCAACCCCTGAAGTTGAAGTTAAAAATGGTGGATTAGTTAAAACTTT AACAGAGGAAGAGTTTCCTTTTATTGGGGATGTTGGGTTAAGTGTGATTAGAGTGAAGCTAGAACCTAATGCTGTTAAGG CACCTTCATACCTTGCAAACCCTGCTGTTCAATTGATGTACATTGCTAGAGGAAGTGGCAAGATTGAAATTGTGGGCTTG AATGGAAAGCTTGCATTGGACAGTCATGTTGAGGCTGGTCATTTGCTTCTTGTGCCTAAGTTCTTTGTGGTTGCTCAAAT TGCAGGGGAAGAAGGAATGGAGAGCTACACTATGGTAACAACTAAAAAGTAAGTCTTGTTTGGATTCAACAGCATGTTTG ATATACTTTTAAATCTTTTTGGAATATTTTTGCTAGTGTCAAAAACCACTTCTTTCCCAAATGTGGAAACATACCAAGTT TTTAAACGCACTTTGATCGGTGTTGTCAGAATTGATTTTGGTAATATTGATTATAGTAACGCTGAGTTGAAAGCGAAGTG GTTTATATTTGAATATAATTTATGAAAACAAATTTTTTGTAGAATAATATTAATTGTGAAATCAAGTTATAAATGTTTCA ATGCAACATCTACTTACTCTATGTAACTTCTAAGTTCTAACAGAATTAATATGAAATCTAAATTACTTCCCCGGGTCTCA AACATCTATTTTGCCATTCAAAATCACTTTTACTCAATCTGATGTTTTCCTATTATGGTGTTAATCCACCATAAAGTAGC AAATAAAGATGAGATGAAATAAAAATGGTTGATTATACTCTTAAAGTATGACATGTAAATTAGGAGTGTTGATGAAAATA ATTGTATGTATATTTATTTGCAGGCCTTTGTTTGAAGAGTTCTCTGGTAAGGCATCAGTTTGGGGCTCCTTAGCACCTGA AGTGCAAGAAGTGTCTCTTAAAGTGGATTCAGAATTTCAAAAGCTTTTCATATCCAAGATCAAGAAAACCTCAAGTATCA TCCCCCCTTCCTCTTGAATGATGCACTGTTGTGTCATTAAAAATAAATAAATTAAAACAGTATTGGCTTGTTTTTGGGTC AAAACAAACAGTTTAGCTTGTGGTTGTGATAGTCGTAGGTTTGGTTGCTATCTTGGTGTTATGCCACGATATACAAGCCC AACTCTTTTTCTTTTGTCAAAGAGTGATGTCTCAACATGTGGGGGTGGCTCACTTCCAATGTGGCAAAGTGTTGTGCCAA GAAAAAGCTGGGTATCTTTTAATTCTAAGTGTTGTTAGACTCGTTCTTAAAGTGAGCTTGCCCCAGTGATATTCTCAGTA TGATTTTTAGTATGAGTGAACATGTTTTAATCTTAATGTGTTATGTTTTATCTGTTTGTATTGTAATATCACTCCTGGTG ATTTTGGACAGTCTTCAATGATCAGTAAGTGGAAAAGTTTGAGCAGATTTAAACAAAAAAAAATGTGACAAACCTTTAAG AGGTTGGGAGAAATGCTCAATTTTTTGACACTTTCTTCATTATCCGCTATTACAATTTGTTGTTAGTGAAGTATCCCCTG AATTAAAGGTCACACAGGTGGTGGCAAAATACCACTGCATAAAAGACTCTAGAAATGGTATGTTTTTTTGTTATACACGG AAAACTGAAAGGTAAAATAAAAATGCTAAGAAGTTTAAACATAGACTAGAAATGA
CDS sequence (LotjaGi4g1v0388500.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGATGGACTTAACACCAAAGACAGCACAACCATTCATTGAAGCAGATGGTGGTAGTTACTACACATGGACAAGTTC TCAAGTTCCACTTCTGGCTAAGACCAATGTGGGTGCTGGTCGCTTTGTGCTTCAGCCTAGGGGCCTTGCTCTTCCTCATT ATGCAGATATCTCCAAAATTGGTTATATCGTTGAAGGAACTGATGGCGTAGTTGGGATGATACTTCCCAACACAGGAAAA GAGGTGGTTTTGAAGCTCAAGCAGGGAGATGTGATACCAGTACCTCTTGGAGCAATTTCATGGTGGTTCAATGATGGAGA CTCAGATCTCATCATTACTTTTCTTGGGGACACTTCAAACGCTCATGTTCCTGGCGATTTCTCCTATTTCTTTCTATCTG GAGTTCAAGGAATTCTAGGAGCTTTCTCCACAGAGCTAACAAGCAAAGCGTATCACTTGAACAATGATGATGAGGTGAGC AAGTTAACCAAAAGCCAAAATGAGGTTGTGATAATCAAGCTAGATAAAAACCAACCCATGCCAAAACCCCAAATTAACCT CACCAAAGAGCTAGTCTATGACATAGATGTTGCAACCCCTGAAGTTGAAGTTAAAAATGGTGGATTAGTTAAAACTTTAA CAGAGGAAGAGTTTCCTTTTATTGGGGATGTTGGGTTAAGTGTGATTAGAGTGAAGCTAGAACCTAATGCTGTTAAGGCA CCTTCATACCTTGCAAACCCTGCTGTTCAATTGATGTACATTGCTAGAGGAAGTGGCAAGATTGAAATTGTGGGCTTGAA TGGAAAGCTTGCATTGGACAGTCATGTTGAGGCTGGTCATTTGCTTCTTGTGCCTAAGTTCTTTGTGGTTGCTCAAATTG CAGGGGAAGAAGGAATGGAGAGCTACACTATGGTAACAACTAAAAAGCCTTTGTTTGAAGAGTTCTCTGGTAAGGCATCA GTTTGGGGCTCCTTAGCACCTGAAGTGCAAGAAGTGTCTCTTAAAGTGGATTCAGAATTTCAAAAGCTTTTCATATCCAA GATCAAGAAAACCTCAAGTATCATCCCCCCTTCCTCTTGA
Protein sequence (LotjaGi4g1v0388500.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEMDLTPKTAQPFIEADGGSYYTWTSSQVPLLAKTNVGAGRFVLQPRGLALPHYADISKIGYIVEGTDGVVGMILPNTGK EVVLKLKQGDVIPVPLGAISWWFNDGDSDLIITFLGDTSNAHVPGDFSYFFLSGVQGILGAFSTELTSKAYHLNNDDEVS KLTKSQNEVVIIKLDKNQPMPKPQINLTKELVYDIDVATPEVEVKNGGLVKTLTEEEFPFIGDVGLSVIRVKLEPNAVKA PSYLANPAVQLMYIARGSGKIEIVGLNGKLALDSHVEAGHLLLVPKFFVVAQIAGEEGMESYTMVTTKKPLFEEFSGKAS VWGSLAPEVQEVSLKVDSEFQKLFISKIKKTSSIIPPSS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 358 | 358 | 1.2E-170 | – | |
| PANTHER | 1 | 358 | 358 | 1.2E-170 | – | |
| SMART | 3 | 159 | 157 | 1.5E-26 | ||
| Gene3D | 7 | 184 | 178 | 8.7E-33 | ||
| Pfam | 8 | 155 | 148 | 3.6E-21 | ||
| SUPERFAMILY | 9 | 344 | 336 | 4.68E-36 | ||
| SMART | 193 | 342 | 150 | 4.1E-10 | ||
| Gene3D | 197 | 359 | 163 | 1.4E-27 | ||
| Pfam | 205 | 339 | 135 | 3.6E-14 | ||
| PRINTS | 214 | 234 | 21 | 1.4E-5 | ||
| PRINTS | 261 | 277 | 17 | 1.4E-5 | ||
| PRINTS | 279 | 294 | 16 | 1.4E-5 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nutrient reservoir activity | Functions in the storage of nutritious substrates. |
Expression pattern of LotjaGi4g1v0388500.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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