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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0392100 |
| Transcript ID | LotjaGi4g1v0392100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Glycosyl hydrolase family 5 protein; TAIR: AT1G13130.1 Cellulase (glycosyl hydrolase family 5) protein; Swiss-Prot: sp|P54583|GUN1_ACIC1 Endoglucanase E1; TrEMBL-Plants: tr|K7KQT2|K7KQT2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0392100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:77065116..77069607) extracted from Lotus japonicus Gifu genome v1.2.
ATATATATATATATATAGTTATCATCATTTATTAAACTCATAGAATACAACATATAAAGCAATGACAAAATTGTTTTCTA AAAAATAAAGAAATGACAAAATAACATTACTCAAAAACAGAAAGGGACTCCTTGAACATCAAAATTCATTTTGCCACGTG ACATAACTTATACACCCTCATTCCCTCAATATATATATAGAAGTCAGTCTCACTTTATGATCATATCATATGCTAATGCT ATGATGGGAAACAAACACGAAATGATGGGTAGTTGGCGGTGGTGGTGCACATTAATATTATTCAATCTTCTAATAATCAC ACCGGAAGTAGTTAAGCCGGTGGTGGCCGTGGCGGGTGTTCCACTTAACACAAATTCACGGTGGATCGTGAACCAGGATG GGCTGAGGGTGAAGCTGGCGTGTGTAAATTGGGTGTCTCATCTGGATGCGGTGGTGGCGGAGGGGCTGAGCAAGCAGCCC GTGGATGTAATTTCAAAGGGAATAAAGTCCATGGGCTTTAACTGTGTCAGGCTCACTTGGCCCATTCTCCTCGTCACCAA TGACTCTCTTTCTTCTCTCACTGTTAGGCAATCCTTTCAGAATCTTGGCCTCCTTGATTCTGTTGCTGGTGTCCAAGCCA ACAACCCCTCCATCATTGATCTCACCCTCATCCAAGCTTTCCAGGTAAGTATTCGTTTCGGTAAACAACTTAATTAAGCT TTTATAGCAATAATTACTTATTGCATGAGGCGAAAATTTAACACACCCATTTGAGTACTACTTCATTGAAAAAGAAAAAA AAATCTCTTAGAGGCGACGTACTCATTTTAAGCACACTTAAGTCTTTTTTAAATGTCTCTATGTGCATTGTTATAAGATA AACTCAAGAAGCTATAACAAATGAGGCTTAAATGAAGACAAGAATATGGTTGACAATTTTAATTCGATATAAATAAAAGA AAAGCAAAAAATTATCATAGAGAAGTATATGAAAGGACAAAATGGATACTTCAGCAATTATACTTTTCATTGCCATCCTT ATCTTCTTAGTTCTTAATGTTATCATTTATGTCATGATGCTTATCATTTGGCGATAAAACAATGGTAGATACAAGTAGTT GAGTTCCTCGAATTAAATTAATCTCCTTTGTTTTTTTTTAGATAAGCATTAATCTCCTTTGTGACATGCTTATAATTGTA CATTACCATAGAGTATATTAAATGGAATATATCATGGGTTTTTGAGAGTATGATAATGAACAACTACACACCAAATAAAG AAAACTCATTGTCTCAACTACCTCACCTATTTTATGAGTTTCTTCTTATTTAACTTGAGTGTTGAGAAACATTTTGTCGA TACTTCAGGCAGTGGTGAAGAGTCTTGGGGACAATGATGTGATGGCAATTTTGGACAACCACATAACCCAGCCAGGGTGG TGCTGCAGCAATTCGGATGGCAATGGGTTCTTTGGTGACCAATTTTTCGACCCGGACCAGTGGATCTTGGGCCTAACCAA AATGGCCACTCTTTTCAATGGAGTGCCTAATGTGGTGGGCATGAGCTTGAGGAATGAGCTCCGAGGCCCAAAACAAAATG TCAATGATTGGTACAGGTAATAATTACAACTAAGAAAAAAACTTAAATAAGCTCTTAATCCCAATTTGATACTTAAATTT AGCTTTGGTCACTTTAACTTTTACATATAAGTTTGATTTGAATTCATACTTTATAATATCTCATGGTGATGTGACTAATA GATGTTCATGTTATTATTGTGACGTGTCAAGAGAAATCTTATATTTGCTCATTTTCCTACCAAATCATATACGATATCTA ACACTTTTAATAAACAAAATATTTTAGATAGGAAAATGATAATCTTTCATAGAGTGAATTTTTTAATAAAAAGAGCTTGG TCCGTTTTGGAAGTAAAATATGTCATATAAGATTACTCTGAACATATGTTGATGATGTGACCCTTTATTTGACACATCAC CTGTTAAAGGTGAGAAAGCGGTGAATGAAATCAAAGTTATTCGTAAAAGTAGAGGTCAAAATACATATGGTTGTAAAGCG GATGCTAAAAACTTATTTAAGCAAAAAAAAAAAAGGTGAGTTACATTTTTCCCCTAGTTTGAAATATGTATGACTTTAGT CCGAGCTAATCAATTTCTTTTACTTTTAAAATGTATTAAATTTGGTCATTCTTTCCATTTTCACATACTTAGAATCATTA AATCATCATTAGTTTAGTAGATGATGGTTTAGTAAAACAAACATGAATGAATGAGAAATGATATGTGGATGATAACTTAT TACTCTTAATTGAAGGTACATGGTGAAAGGAGCAGAAGCGGTTCATGCAGCAAACCCAGATGTTCTTGTCATTCTATCTG GTCTAAACTTTGACAAGGACTTGTCGTTCATTAAGAATAGACCAGTGAATCTCACATTCAAGGGGAAACTAGTATATGAG GCACATTGGTATGGCTTCACTGATGGTCAAGCTTGGGTATCAGGGAACCCAAACCAAGTGTGTGGTCAAGTGGCTGGGAA CATGAAGAGAACCTCTGGCTTCTTGGTGGACCAAGGTTGGCCATTGTTTGTGAGTGAGTTTGGTGTGGACTTGAGAGGTT CAAACGTGAACGACAACCGCTACCTTAACTGTTTCATGGCGGTGGCGGCCGAGCTTGACTTGGATTGGGCCTTGTGGACA CTGGTTGGTAGTTACTACTTCAGACAAGGGGTCAGAGGAATGGAAGAGTTCTATGGGGTTCTTAGATGGGATTGGACACA AGTTAGAAATACCAGTTTCTTGAACAGGATCAATGGCCTCCAACTTCCATTTCGAGGTATGAGGAAAAATCCTGATCTTC ACTTCTTTTGTTTAAAGTTGAATGTGACTAAAAATGGCAGCTCGGTGCACAAAAGCTTTCGCTATGCCAGGGTCTGGGAA AGCATCCGACCACTTGGTGTCTTATATGCTTCCTAACTCTGTTTTTACATAAGAAATTGTTTTCAGGACTTGATGTGATT AATTCATGGTAATCAAAATCGCAATTTACGTCGCTAAATCGCACACCCTGCAATTTAATCGCCAGCTAAATTACTGTTAA ATTGCTCCTAAATGGCACCCTAAATCTATAAGTTAACTGTTTTCTCTGCTGTAGTGTAATGTCAACCCCCCCCCCCCCCC CCTTTTTTCTCTATTCTCCCTAGTGTTATGAATTTATATACGCGCACATACACAGATATGTAGGAAATTTTAGCTATTTA TGATTTACAACCCCTACCCGATTTAAGGCAAAATTCTGATTTCGACTACTATGGATTTATGATTTTAAATTTGGGATATG ATTAATTGGTACTAGGTGTCAAATTTATAGGCTTACTCCACTTGATAGGCTGTTGTAGAATGCAAAATTAATCATTCTAA CAGTTGAATTATGTCGTTACTTTGTACAGGGCCAGGTATAACAAAAGGCAATCCATACAAATTGATATTCCATCCTTTAA CAGGTCTCTGTGTCACAAGAAAGTCATTGCTAGAGCCACTAACATTAGGTCCTTGCTCTTTTTCTGATGGTTGGAATTAC ACACCCCAGAAGACCCTATCAATAAAGGGAACCTACTTTTGCATACAAGCAGAGAATGAAGGGATGCCTGCAAAACTTAG CATAATATGCTCGGGTCCTAACAATAAATGGGAAATGATCTCAGATTCAAAATTGCACCTTTCATCTAAAGTCAACAATG GTTCTAGTGTTTGTCTAGATGTTGATGAAAACAACAACATTGTGACCAACTCTTGTAAATGCTTGAGCAGAGATGTAAAG TGTGACCCAGGAAGCCAATGGTTCAAACTCATTGACAGTGGAAGAAGGTCAATGTCCACAACTTCAGCATTGTCCATGCT GAATTTACCAGACCTGTTATGGAAACCTTTGAGCTCATCATAAGTTGTTATTAATCGCACTGCTAAAAATTTCTTTGACC ATGTTAATACTCATTGAATGTATCCCCTAACAATGTTTTAATAGTACAAATTAAAGTGATGTAGTAAATATGTTCATGAG GTGATATTGGATTTAATACATACCGTCTTACAATGAAAAATGAACAAATTTACATAAGCAGGATCATATATAGAGTTGTC AAACACCAAGAATAGGAATCAGGAATCCAAGAAAAAGTATTGAAGAAAGGTAGTTTACAAGTTCCCTTGTTGCTTGGGTC TAAAGGTGAGAAAGATTATGATAAAAAAAAAGGGGACGAGAGTAAAGATTGATGAAGTCATGATGTGAATCACACTTTGT GAGATTGTAACATTTGGATTTAAGTAAAAACATTCATCTTGGATTGGAACGCCTCATAGAGGATTCCCTGATCTACTTCA AAGAATTTGCTACGCGTTTTGGGTTTCTATGTAGTATTGAGTTTGATTTTACATAATTGCAAGCAAAATCGCATTGATTG GGTTTATTTAAG
CDS sequence (LotjaGi4g1v0392100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATCATATCATATGCTAATGCTATGATGGGAAACAAACACGAAATGATGGGTAGTTGGCGGTGGTGGTGCACATTAAT ATTATTCAATCTTCTAATAATCACACCGGAAGTAGTTAAGCCGGTGGTGGCCGTGGCGGGTGTTCCACTTAACACAAATT CACGGTGGATCGTGAACCAGGATGGGCTGAGGGTGAAGCTGGCGTGTGTAAATTGGGTGTCTCATCTGGATGCGGTGGTG GCGGAGGGGCTGAGCAAGCAGCCCGTGGATGTAATTTCAAAGGGAATAAAGTCCATGGGCTTTAACTGTGTCAGGCTCAC TTGGCCCATTCTCCTCGTCACCAATGACTCTCTTTCTTCTCTCACTGTTAGGCAATCCTTTCAGAATCTTGGCCTCCTTG ATTCTGTTGCTGGTGTCCAAGCCAACAACCCCTCCATCATTGATCTCACCCTCATCCAAGCTTTCCAGGCAGTGGTGAAG AGTCTTGGGGACAATGATGTGATGGCAATTTTGGACAACCACATAACCCAGCCAGGGTGGTGCTGCAGCAATTCGGATGG CAATGGGTTCTTTGGTGACCAATTTTTCGACCCGGACCAGTGGATCTTGGGCCTAACCAAAATGGCCACTCTTTTCAATG GAGTGCCTAATGTGGTGGGCATGAGCTTGAGGAATGAGCTCCGAGGCCCAAAACAAAATGTCAATGATTGGTACAGGTAC ATGGTGAAAGGAGCAGAAGCGGTTCATGCAGCAAACCCAGATGTTCTTGTCATTCTATCTGGTCTAAACTTTGACAAGGA CTTGTCGTTCATTAAGAATAGACCAGTGAATCTCACATTCAAGGGGAAACTAGTATATGAGGCACATTGGTATGGCTTCA CTGATGGTCAAGCTTGGGTATCAGGGAACCCAAACCAAGTGTGTGGTCAAGTGGCTGGGAACATGAAGAGAACCTCTGGC TTCTTGGTGGACCAAGGTTGGCCATTGTTTGTGAGTGAGTTTGGTGTGGACTTGAGAGGTTCAAACGTGAACGACAACCG CTACCTTAACTGTTTCATGGCGGTGGCGGCCGAGCTTGACTTGGATTGGGCCTTGTGGACACTGGTTGGTAGTTACTACT TCAGACAAGGGGTCAGAGGAATGGAAGAGTTCTATGGGGTTCTTAGATGGGATTGGACACAAGTTAGAAATACCAGTTTC TTGAACAGGATCAATGGCCTCCAACTTCCATTTCGAGGGCCAGGTATAACAAAAGGCAATCCATACAAATTGATATTCCA TCCTTTAACAGGTCTCTGTGTCACAAGAAAGTCATTGCTAGAGCCACTAACATTAGGTCCTTGCTCTTTTTCTGATGGTT GGAATTACACACCCCAGAAGACCCTATCAATAAAGGGAACCTACTTTTGCATACAAGCAGAGAATGAAGGGATGCCTGCA AAACTTAGCATAATATGCTCGGGTCCTAACAATAAATGGGAAATGATCTCAGATTCAAAATTGCACCTTTCATCTAAAGT CAACAATGGTTCTAGTGTTTGTCTAGATGTTGATGAAAACAACAACATTGTGACCAACTCTTGTAAATGCTTGAGCAGAG ATGTAAAGTGTGACCCAGGAAGCCAATGGTTCAAACTCATTGACAGTGGAAGAAGGTCAATGTCCACAACTTCAGCATTG TCCATGCTGAATTTACCAGACCTGTTATGGAAACCTTTGAGCTCATCATAA
Protein sequence (LotjaGi4g1v0392100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MIISYANAMMGNKHEMMGSWRWWCTLILFNLLIITPEVVKPVVAVAGVPLNTNSRWIVNQDGLRVKLACVNWVSHLDAVV AEGLSKQPVDVISKGIKSMGFNCVRLTWPILLVTNDSLSSLTVRQSFQNLGLLDSVAGVQANNPSIIDLTLIQAFQAVVK SLGDNDVMAILDNHITQPGWCCSNSDGNGFFGDQFFDPDQWILGLTKMATLFNGVPNVVGMSLRNELRGPKQNVNDWYRY MVKGAEAVHAANPDVLVILSGLNFDKDLSFIKNRPVNLTFKGKLVYEAHWYGFTDGQAWVSGNPNQVCGQVAGNMKRTSG FLVDQGWPLFVSEFGVDLRGSNVNDNRYLNCFMAVAAELDLDWALWTLVGSYYFRQGVRGMEEFYGVLRWDWTQVRNTSF LNRINGLQLPFRGPGITKGNPYKLIFHPLTGLCVTRKSLLEPLTLGPCSFSDGWNYTPQKTLSIKGTYFCIQAENEGMPA KLSIICSGPNNKWEMISDSKLHLSSKVNNGSSVCLDVDENNNIVTNSCKCLSRDVKCDPGSQWFKLIDSGRRSMSTTSAL SMLNLPDLLWKPLSSS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 23 | 23 | - | – | |
| SignalP_EUK | 1 | 41 | 41 | - | – | |
| Phobius | 1 | 44 | 44 | - | – | |
| Phobius | 24 | 35 | 12 | - | – | |
| PANTHER | 25 | 563 | 539 | 0.0 | – | |
| PANTHER | 25 | 563 | 539 | 0.0 | – | |
| Phobius | 36 | 44 | 9 | - | – | |
| Phobius | 45 | 576 | 532 | - | – | |
| Gene3D | 48 | 407 | 360 | 1.1E-77 | – | |
| SUPERFAMILY | 49 | 400 | 352 | 1.08E-62 | ||
| Pfam | 91 | 368 | 278 | 1.3E-26 | ||
| SUPERFAMILY | 419 | 546 | 128 | 3.21E-10 | ||
| Gene3D | 422 | 546 | 125 | 6.7E-6 | – | |
| CDD | 422 | 528 | 107 | 8.8623E-5 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. |
Expression pattern of LotjaGi4g1v0392100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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