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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0400000 |
| Transcript ID | LotjaGi4g1v0400000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Glucan 1,3-beta-glucosidase; TAIR: AT3G20080.1 cytochrome P450, family 705, subfamily A, polypeptide 15; Swiss-Prot: sp|Q5B5X8|EXGA_EMENI Probable glucan 1,3-beta-glucosidase A; TrEMBL-Plants: tr|I1K4L7|I1K4L7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0400000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:77741315..77745139) extracted from Lotus japonicus Gifu genome v1.2.
CAAACATAAGAAGAAGATTACTAGAACGCACTTAATATTCAACTAAAATCTAGGCAAAGATAATAACTGAATACTTGATA ATTCAATGTAGTGATTTGAAGCCTATATATATTAATATTACACACACTATCCTCATGTGTAACACTCACTCCAAGAGTCT AATATGATGGGAAACCAATTTTTCTGCTTGAAACTTTTGTTGGCTTTCTACCTCTCATCATGTCATTATGTTTCTGTAGC TCACACTGAAAATTCCTTTTTACCACTCAAAGCTGTGAATCTTGGAAATTGGCTTGTTACTGAAGGGTGGATGAAACCTT CTCTCTTTGATGGAATAACCAACAAAGATCTTTTGGTATATGTTAATCTCTATCACTCATCATTAATCATTTTGTTTTAG CAATGCCCTCTATTTCCACTACTTTTATGAATAAACTACATATTAATAGTGTTGGACTAATTTATTCAATTCTAGGAAGA TCTTTTGTGAAAAGCTTCTGGTGTTAGAATTGATTATAACACAAATGAAGTTGATCCGAATATGCTATAATTCGGTGATT TCAGGATGGAACTCAAGTGCAGTTCATGTCTACAAAGTTGCAAAAGTATCTGTGTGCAGAAAATGGGGGAGGAGATGTTG TTGTTGCTAACCGCACCAAACCTTATGGTTGGGAAACTTTCAGGGTTGGTTCTTCATCCATGTAGAATAATATAGTTTGA AGAGTTAAATGTATGTACTAAACTTTGTATATTTAATTATTCTGTTGACTCTTTTTGTGACTATTATCAACAACCAGTTA TGGAGGGTCAATGAGTCCACCTTCAATTTTAGAGTGTCACATAAGCAATTTGTGGGGTTGGAAGATGAAAATGGAGGAAG CAAATTAGTGGCTACTTCAGATATACCTACCAACATGGAAACATTTCAGATTGTGAGGAATGATGGTGATCCAAGCAGGA TTCGGATAAGAGCACCAAATGGTCTGTTTTTACAGGTACTTTGGCCTTACTTACTTATCACATGATCATGATGATGATAT TGAAGTTTTAAACTTTCTCCAATCCAATGTTTTGGAACTGATTTGAAAATCCTACTACAATTAATCAATTCTGTAAAGAA GCTTCTGTAAATAATTTTTAAATATTAGAATTGATTTTGGAAGAAAAGAAAAAGCCGACTCAAACATAAAATAAATATAA ATAGGACCACATTTATGAGTTTTATAGTGATGGACTGATGGTTGCTTATAGATTTTAACTTTTGATGTTTCTATACTCTT AAAATTGTTCATCAGGCCACAGGGGAGACTCTAATGACAGCAGATTATGAAGTATCTACTTGGGAGGATAGTTGGGAGGA CAGTGACCCTTCAGTCTTCAAAATGACTGTTTTGACAAACACCGTATTAAAAGGAGAATACCAACTTACAAATGGTTATG GTCCAGACAAAGCTTCCAAAATTATGCGGGTAATTAAGTGCATATTTGAAAGTCCTTCTATAATTAATTGAAAAATCAGT CAATTTAGAGGATTGGAGTAAAGGTTCTCCAAATAACTTCTAGGTTATAGAATTGATTCTATGAAATATAAGAGCATGTT TGGATGATGTTTGGTTGGATGTACCAGTAAAGCAGAATCATTTCTACTTACCACAATAAATAGTTGTTTCTGTGTTAAAC ATAACTAAATTTGAGATTTTACAATTTAATTTCATATCATTTACCTACAAAGGCTTTTTTTATATAGGAGTATAATTTTA GTAAAATCAATTATGTGCATAACTAATTTTGCTAATGTTCATCGAAACATACTAAAAATCTCACCTTTGAAGAGAACAAG CACTAGCAATTAAAGTCAAAGCAGGTTTTAATTGATTGATAGAATTATGTTGGGCATGCAGGATCATTGGAACAAATACA TCACAGAAGATGATTTCAAATTCATGTCAGAAAATGGCTTAAATGCTGTCAGAATCCCTGTTGGGTGGTGGATAGCTAAG GACCCAACACCACCAAAGCCATTTGTGGGGGGATCTTTGGCAGTATTAGACAATGCATTCACATGGGCACAGTAAGAGCA CTAATTAATTTAAGGGCTGGTACCTAGTCTAATTTATTAGTACTAGTGGTAGAGCATGAGATATGAAGAAAAAGACACTT TGACCTCCATCAATGTTCATGAATCACACTTAATGTAATTTGCAGAAAGCATGGAATGAAAGTAATTGTGGACCTGCATG CTGTTCAAGGCTCACAAAATGGACAACCTCACAGTGCTTCAAGAGATGGATATAGAGAATGGGGAGAGTCATACATACCT GATACTGTGGCAACTATAGATTTTCTAGCTGAAAGGTACATAATTTTGAGTATACGTCCCTTTCAATATCCTATAAAAAT ATTTGTCATCATGTTTGTCCATAAACACATTAATCAGTATGTTGAATTGTGTAAAATAAACTCTTATTGTGAACATCAAT GTTTTGTGAACCGTGAAACTTTTGCTGACATTAGTGAGATACCAGCCTTTGTAAAGGTTTTAAAGGATCACTAAACGTGT TTTATCATCTTCTTTAAAACTTTCACTTTACGGTGGTCTAAAACAACTACAAAAGTGAGTGTGCCGACACTAAATATACT TCACATCAGTGATGTTGTCATTGTGTTAATATAAGGATTTATATATAGTTCAATGCACATTTAATAATAAGCTAAACCTT GTAGCTTCAAATTATATTGGTAATGATTAAACAACATTTTTCACAGTGAAACCAAACTTATTATAAAATTGTTCCTAGTC CCATTTACTTACTATAAAATTGCTTTCCAGATATGCTAACAGTGAGAGCCTAATTGCAATAGAGCTGATGAATGAGCCTC AAGGTGTGAATCTGCAAAGCCTTAAAAGTTATTATCAAGCAGGTTATGATGCTGTACGGAAACACACATCTAGTGCTTAT GTAATCATGTCTAGTCCTCTGGATAGAGATCCAAAAGTGCTCCTTCCGTTTGCTAGAGGTTTCAGTGGAGTTGTCATGGA TGTTCATTACTACAATCTCTTCTCGAATCAATTCTCCAACATGAATGTGCAGCAGAACATTGATTACATTAAAAATCATA GAGCTTCGGAACTTGCCTCTCTAACCACATCTAATGGACCCCTCACATTTGTTGGTAAGTTTTCAACCATTTTTTTGAGT AAACTGCTTAGAATCCAAAAATAATTCATTGAAAAGCATATGTATAAAAGGGTAAATGAAAAAATAAATCAGTTAGGTGA TTGGGTTTCTTTAGATTGATAGATTTACCCAATGTATATAGCATAACATAACCATGGTTAATAATTGTGGTGGTTGAATC TGGCAGGGGAATGGAGTGGTGACTGGAAAGTGCGGGGAGCATCAAAGAAAGATTTCCAAAAATTTACACAGGCCCAAGTT AAGGTGTACTCTCGGGCCACATTTGGATGGGCTTATTGGGCCTACAAAGGCGATTCTAACTACTGGAACCTTAAGTGGAT GATTGAAAACAATTATTTTAAGTTTTAGAATATACCCAAAATCGGGTCGGGTATTTGATTATATAATTGTTCACTAAAAT CGGGTCAAGTGTAATATATAAAATAAGAATATAAGGTACTTCTATTATATATGTACCAAAAAAATATATGTATATCCATC ACTTTCCTCATCTGTGATTAATGCACTGAATAATGATAATGCAACTTTCGGTTATCTGCTTTACCTCTTTAATCTTAAAA TTAGTAAATGATGGTCCCAAATATGAAATATGTTGTTCTTCTTCATCAGTTTATCAATTGTCACA
CDS sequence (LotjaGi4g1v0400000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGGGAAACCAATTTTTCTGCTTGAAACTTTTGTTGGCTTTCTACCTCTCATCATGTCATTATGTTTCTGTAGCTCA CACTGAAAATTCCTTTTTACCACTCAAAGCTGTGAATCTTGGAAATTGGCTTGTTACTGAAGGGTGGATGAAACCTTCTC TCTTTGATGGAATAACCAACAAAGATCTTTTGGATGGAACTCAAGTGCAGTTCATGTCTACAAAGTTGCAAAAGTATCTG TGTGCAGAAAATGGGGGAGGAGATGTTGTTGTTGCTAACCGCACCAAACCTTATGGTTGGGAAACTTTCAGGTTATGGAG GGTCAATGAGTCCACCTTCAATTTTAGAGTGTCACATAAGCAATTTGTGGGGTTGGAAGATGAAAATGGAGGAAGCAAAT TAGTGGCTACTTCAGATATACCTACCAACATGGAAACATTTCAGATTGTGAGGAATGATGGTGATCCAAGCAGGATTCGG ATAAGAGCACCAAATGGTCTGTTTTTACAGGCCACAGGGGAGACTCTAATGACAGCAGATTATGAAGTATCTACTTGGGA GGATAGTTGGGAGGACAGTGACCCTTCAGTCTTCAAAATGACTGTTTTGACAAACACCGTATTAAAAGGAGAATACCAAC TTACAAATGGTTATGGTCCAGACAAAGCTTCCAAAATTATGCGGGATCATTGGAACAAATACATCACAGAAGATGATTTC AAATTCATGTCAGAAAATGGCTTAAATGCTGTCAGAATCCCTGTTGGGTGGTGGATAGCTAAGGACCCAACACCACCAAA GCCATTTGTGGGGGGATCTTTGGCAGTATTAGACAATGCATTCACATGGGCACAAAAGCATGGAATGAAAGTAATTGTGG ACCTGCATGCTGTTCAAGGCTCACAAAATGGACAACCTCACAGTGCTTCAAGAGATGGATATAGAGAATGGGGAGAGTCA TACATACCTGATACTGTGGCAACTATAGATTTTCTAGCTGAAAGATATGCTAACAGTGAGAGCCTAATTGCAATAGAGCT GATGAATGAGCCTCAAGGTGTGAATCTGCAAAGCCTTAAAAGTTATTATCAAGCAGGTTATGATGCTGTACGGAAACACA CATCTAGTGCTTATGTAATCATGTCTAGTCCTCTGGATAGAGATCCAAAAGTGCTCCTTCCGTTTGCTAGAGGTTTCAGT GGAGTTGTCATGGATGTTCATTACTACAATCTCTTCTCGAATCAATTCTCCAACATGAATGTGCAGCAGAACATTGATTA CATTAAAAATCATAGAGCTTCGGAACTTGCCTCTCTAACCACATCTAATGGACCCCTCACATTTGTTGGGGAATGGAGTG GTGACTGGAAAGTGCGGGGAGCATCAAAGAAAGATTTCCAAAAATTTACACAGGCCCAAGTTAAGGTGTACTCTCGGGCC ACATTTGGATGGGCTTATTGGGCCTACAAAGGCGATTCTAACTACTGGAACCTTAAGTGGATGATTGAAAACAATTATTT TAAGTTTTAG
Protein sequence (LotjaGi4g1v0400000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMGNQFFCLKLLLAFYLSSCHYVSVAHTENSFLPLKAVNLGNWLVTEGWMKPSLFDGITNKDLLDGTQVQFMSTKLQKYL CAENGGGDVVVANRTKPYGWETFRLWRVNESTFNFRVSHKQFVGLEDENGGSKLVATSDIPTNMETFQIVRNDGDPSRIR IRAPNGLFLQATGETLMTADYEVSTWEDSWEDSDPSVFKMTVLTNTVLKGEYQLTNGYGPDKASKIMRDHWNKYITEDDF KFMSENGLNAVRIPVGWWIAKDPTPPKPFVGGSLAVLDNAFTWAQKHGMKVIVDLHAVQGSQNGQPHSASRDGYREWGES YIPDTVATIDFLAERYANSESLIAIELMNEPQGVNLQSLKSYYQAGYDAVRKHTSSAYVIMSSPLDRDPKVLLPFARGFS GVVMDVHYYNLFSNQFSNMNVQQNIDYIKNHRASELASLTTSNGPLTFVGEWSGDWKVRGASKKDFQKFTQAQVKVYSRA TFGWAYWAYKGDSNYWNLKWMIENNYFKF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 25 | 25 | - | – | |
| SignalP_GRAM_NEGATIVE | 1 | 26 | 26 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 26 | 26 | - | – | |
| SignalP_EUK | 1 | 20 | 20 | - | – | |
| Phobius | 1 | 5 | 5 | - | – | |
| PANTHER | 2 | 508 | 507 | 3.2E-298 | – | |
| PANTHER | 2 | 508 | 507 | 3.2E-298 | ||
| Phobius | 6 | 17 | 12 | - | – | |
| Phobius | 18 | 25 | 8 | - | – | |
| Phobius | 26 | 509 | 484 | - | – | |
| SUPERFAMILY | 34 | 507 | 474 | 5.51E-87 | ||
| SUPERFAMILY | 67 | 190 | 124 | 6.93E-20 | ||
| Gene3D | 68 | 190 | 123 | 4.4E-21 | – | |
| Gene3D | 191 | 509 | 319 | 3.3E-82 | – | |
| Pfam | 227 | 492 | 266 | 2.4E-28 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. | ||
| Biological process | Actin filament organization | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments. Includes processes that control the spatial distribution of actin filaments, such as organizing filaments into meshworks, bundles, or other structures, as by cross-linking. | ||
| Molecular function | Actin filament binding | Interacting selectively and non-covalently with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits. |
Expression pattern of LotjaGi4g1v0400000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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