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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0402100 |
| Transcript ID | LotjaGi4g1v0402100.5 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein kinase family protein; TAIR: AT5G64940.1 ABC2 homolog 13; Swiss-Prot: sp|P73627|Y1770_SYNY3 Uncharacterized protein sll1770; TrEMBL-Plants: tr|G7LB96|G7LB96_MEDTR ABC transporter-like protein; Found in the gene: LotjaGi4g1v0402100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:77932503..77940160) extracted from Lotus japonicus Gifu genome v1.2.
TCACCGGATTTTGCCCATGCTACTCCGTTTCCAGGCACAATGTCTCTCTTCGCATGCGAATCCGCGCTGTCAAGGAAGAA GGTGCTGCAGTGGTTGACTTGGCGGAGAGAGCGAGCGATGTCAAATGGACTGGAAACGGTGCTGCTACTTCTGCTGCTGC ACGAGGTAGCACTAATGGCTCTGTCAGAGGTTACGACTTGAATGGAAGCTTGGTGAAGTATGGGAGTGGGAATGGGAATG GAGCTGCGGCGGTGGCGGGAGGAGATTTTTCTGCTGAAGCGTCGAGCAAGAGGAAGAGGAGGTTGGAGGAGATTGGTAAA GAAGATGCGTGGTTTAAACAAAGTAAGGAACCGCAGGTTGAGGTGGCGGTTGCGCCTGGAGGTCGTTGGAGCAGGTTCAA GACTTACTCCACTATACAGAGAACGTTGGAGATTTGGGGATTTGTCATCACATTTGTCTTCAAGTCTTGGCTGGATAGTA AGAAGTTTTCGTATAGAGGTTTGTCTATTTCATGAATGAATGAAATTTGAATGAGATTCTACAATTTGATACAATTAAGC ATGTTCTAATATTGTTCTTGGAATTGTGATCAATTAATCATGAAGTGTCTTTTATTGTGTTGGATAGTCTCAATATGGTA ACTGTTTGTTTTTCATTTGATTCAAATATATTATTTGCAGGAGGAATGACTGAGGAAAAGCAAAAATTGAGGCGAAAGGC CCTTGCCAAGTGGCTGAAGGAAAGCATTCTAAGATTAGGTCCTACGTTTATCAAGATCGGACAACAATTCTCCACGAGAG TGGACATTCTTCCTCAAGAATACGTTGACCAGTTGTCAGAACTTCAGGTGAAATTCGACTTCTAAACAACCCTTGCAATC TTATTCCTTGCAAGATTATTTCCCTGCATGGAGATATTTACTATCTAGAATTTGCTTCAGTTGTGTGTCACCTTTCTTAT CCAATTTGTTATTAATGGTATTTATGGTTTCATTGGAAAAATAGGGAAGTTTCTCTGAATTTCAGATTTGTTCATTAGTT TCTTTATTTGTTGTCTGGCTTTCTATATTGGCATTCTAATAGTAACTCATTTGCATTCTATTATTGTCTTCTTTTTTTCC TCATAGAATAGGTAATTATCATTTAGAGTTGACTACTTCAACCTCTTTTGGTGGTCTTACTATACAGGTCATCTAATTGT TGAAAAGGAAAATGAAAAACATCGGAAAATTGATAGAAGTGATACCTATTTGATTTTTATTGCTAATGCTCTGAGAAAAT TTATTCATTACTTGCATTCATGAACCCCAAGGAAGATGTTAATCCCTGAGGCTTTTAATGTGAAATTTATTAAGTATTTT TTGGTAATTGAGTGCCTATATTTTCTTACCAAATTCATTTTGATTTACATACAAATGTTGGAATTAGTTACACATTAGAA TTAAACTTTCATTTTGTAAGGTTGGATAGGAGCATTGTTACCCTTGTATTATTAAGTAATTAGTTGTACATCTTGCTTAT CTAGTTTGGCATCAATTAGTGCTGTTTGATGATGTTAATAGGACTGAGAATATCTGACTTTAAGTTAAGAAAGCTGATGA AAAAGTAATCTTGACCCAAGGAATAGCTGAAAGCTTAAGTCAAGAAGAGAAAAAGATATTAAGGTTGTATTTCGCCTAAC TAATTTTTTTTTGGGTTTAGGATCAAGTTCCTCCATTTCCCTCAAAGACTGCTATAGCTATTGTTGAGGAAGAGCTTGGA GCTCCTTTAGCTAGCGTCTTTGATCAGTTTGAGTATGAACCAATAGCAGCTGCAAGTCTTGGTAATTAATATTTTACTCT GCATGTATATTTAATTAAAAATGTACAATCAGAGAGAGACATCCGATCAGATGTACCTTTGTTTTAGGTGTAATATTTGA TTTGATGAAACGAATAATGAAATATTTTCCCCCTATGCAGGCCAGGTTCATCGTGCGAGATTAAAGGGAGAGGAGGTTGT TGTCAAAGTGCAAAGGCCTGGTCTCAAGAGTCTTTTTGATATTGATCTTAAAAACCTGAGGGTCAGTCTTATAAGCATTT TGTGTCATGCTTTACACTTTCGACCATGTGCACACATGTGATATTACTTCGAGATAAATCCATTTGTTTCTCCTTAATTT ATCCCCTTATTTTTAGGAACCTGTCAAGATTGACAAGTCTTCAAAATTTGAACTTCCTTTCCTTTTTTTTTACAAAAAAT CCTTGCATGAAGATGATTAGTAATAGGACTTCCAGCCTGTGAAGCTTGCAGTTGCAGCATTTCATGAAACACTGATACTT TGGTTTCCCCTCCAGGTTATTGCTGAATATCTTCAAAAAGTTGATCCTAAATCAGATGGTGCAAAGAGGGATTGGGTTGC TATTTATGATGAATGTGCCTCTGTTTTATATCAGGTGATGATATTATGAAAAATTGCTCCATTCTTACGTTAATTGACAT CAACTGAAGAAAGTCATATTGGTGTGATTCTGTTGTTGTGAATTCAATATGAAGATTGTATATGAACACTACTCGTTTAG AGTTTGATATGTTCAGGTGCATGGAATGGGGTCAAGAGGCTGCGGGCTCTGCTCTGTACAATTGCATGTGTTTTCTGCAC ATCCTCAACTTTATTCTGTTAATGTAACATGAATTAACAATTTTCAGGAGATTGACTACACCAAGGAAGCTGCTAATGCA GAACTATTTGCAAGTAACTTTAAGAATATGGATTATGTCAAAGTCCCTTCGATTTATTGGGACTATACAACACCACAGGT TTAACCTCCATTGCTCATAGATATAGCAATTGTACATCTTTTACTTATATATTTCCTATTTATCTGTAATTTAAGTATTT TTCTAATGCAGATTCTGACAATGGAGTATGTTCCAGGGATTAAAATAAACAAAATACAAGCTTTAGATCAGCTAGGTGTT GACAGGAAAAGGTTAATAGAATCTGTTTTTCTGCGCGGAAAATCATTATTGCCATGTTACCTTTTACTTTTGTGAATCTC AGTAAATGAGAATGGCATCTAAAATTCAAATTAATACAATATTTGCTCTATCTTCTACAGGTTAGGGAGATATGCTGTTG AGTCTTACTTGGAGCAGATTCTATCACATGGTTTCTTCCATGCTGACCCTGTGCGTTGTTGTTTTATAACTTAGTAGTTT TTGAGTTCTCTCTCTCTCTTTCGATGATTCTTTGGAATTATCTAGCTGGTTTTTTTTTTTTATAGGCAAATGTTAGTTGT TAGAAATGTTAGTAAATTAATCCCTCCTCCGGGTTCGAAAAAATTTGTAGTGAAGCCTACTATGTTATGTTTGTTGAAAC TGAACGAATTCTGAATAATTGATTGATAAAAGATAAAATACTTACCCATGTTTATGGTAATGGATAGACTCCTAATTCCT GTTAAATAAGGAAACTAATAATACTCCTAATCCTAATTAAATAAGGAAACAAATTAATCTTAGCACTAATATAAATTGCC TTAATTACTCTAAGATAAAACTAACATATAAGATACTTTAAGTTATGATTAATATATTAAACTGTGTTAAATGAGGAATA ATAGATTCTCGTATTTCATGATTATTATAAGGAAGTTCAATTTGATGCTTCTTCTTGCCTATTATTAATTTATACATTAT TCATGCAGCATCCTGGAAATATTGCAGTTGATGATGTCAATGGTGGAAGATTGATCTTTTATGATTTTGGAATGATGGGA AGGTATGTACGTTATATTTCTGTATATTTAAAATATGACTTTACAAATCAAACATTTTAAGCTTGATGAGATAATTGCCT GTTCAATCATGATTGGTGTTGAACCTTACAGTATCAGTCAAAATATCCGAGAAGGTTTACTTGAAACTTTTTATGGAGTT TATGAGAAGGATCCAGATAAGGTAAAGTAACTTTTTCTTTTGGTGTCCCTTAAGGTCATAAAATATGACTATTCCTTTCT CTATTCTAAATTACTTACCAAATGAAGCTTGTGCATTGATTTAGGTCCTTCAAGCAATGATTCAAATGGGCGTTCTTGTC CCAACTGGAGATATGACTGCCGTTAGACGAACAGCACAGTTCTTCCTCAATAGGTAGTTTATTGAGTTTAGTAGGAATAC ATCAAAAGTAGAAACACCTCCAGTGACTCCACCATATGTAAAGAGGATGCTTAAAAACACTTAACAAGTGTTCTAAAAAG GATACTCTAATATTAGTAAAGGAAATTTTAGTGAAATGATTGGGGTTTGTGCAGATTAGTTATGTTAGGATTAGGAATAT TGTGATGTTAATGTTGGCTCATGTGGTGGGATCAAACCATGTCAAACTGTCAAAGGCCTTTTAGGTTTGATTCTTGTTGG TTTCATTGCCAAGTAATCTTTATTTACCACTATGGGTTATGAGCAATCCTTGAGGATTATAGCATGCCTTGACCTTGAAA TGAATCAACCTCCCATCCTCTAAACTTCTTTCACCAAAAGAAAAAGACATATATATTTATTTGAAATGTGTTACTGCACA TTTCTGACTAGTCGTCGATACTTTAGGTTTATAATATATTTTTCTGCCCTCAAATCTTATGGTCTATGATTACTTATCTA TACTGATTTGTGTAGCTATCCACCGCAACTATGAACTTGACCTGTTTATTTTTCTTTTCTATAGTTTTGAAGAGCGTCTG GTTGCACAAAGGAGAGAGAGAGAGTTGGCTGCAGCTGAACTGGGATTCAAAAAGCCACTAAGCAAAGAGGAAAAAGTAAT GAAGAAGAAAGAACGTCTGGCTGCTATTGGTAAGTCTAGTAGTGTGTCTTTAGGTTTAGATTATTTAGACGTATGCATGC AAGTGCTCAATATTTATTGTAGATGAAGTTAGCCGTATGTGAAGATGAAAATAGATAAGTTTTACTATTCTAGGGAAGAA TATATCGTTGGCTATTGGTTATTATTTTATGTAGTAGCTTTCTAAGTGGATGAAAACTGTTTAATTCCATAATATGATTT TTTAATTTACGTTGCTTTTCCTGATTGGTTAAAATGATTCAGTCCACGAAGTTTGACATGACCAGCCCAGTGTTATCAAA TAGCGGCTATAGCGGCGCTATGCCGCTATAGCGTAGCGGATTTTTGGCTAATCGCGACGCCCGCTATTGCCCGCTAGTTC CGCTATTCGCCGCCAAATAGCGGCCGAAATAGCGGATTTTTGGCTCACCGCGATCGCGATTTGATAACACTGGACCAGCC TCAACTAAAAGATTATGCACTGCATCAGAACTTCCAGTACTTCAACTTATTAGTCGTTGCATTGTATTTGTATCAGTACT TTTTTAGTTGGACGGAATGGATCATTCTCATTCCCAATTTTAGTGAGGTAATTGGAATGGAAATTTAGATATTACAGAAG TGATGGAATCCCATTCCATCTCACCAGCATGAGTTGAAAACGGCCTATCCCATCTGGCCTACATGTATAATAGGGGTCAG GGGAGTCACCATCCAATTCCTATTCATAGCAAATGAAACATTGGAACACAAATTTCTTTCGCTCCCATTCTCATTCTCGT CTGTTCAAAAATCATTTCATCAAGTCAAACATGAATTAGTTCAATAACAGTACGATAACAGTATTCCACACAGAGGCTTA TATGACTCCTTGCTCTCATCCTTTAAACAGGTGAAGATTTATTATCCATTGCAGCAGACCAGCCCTTCCGGTTTCCTGCG ACATTCACATTTGTTGTTAGAGCCTTCTCAGGTAAACTTCTGACTTTAATGTGTTACTCCGCATATTCTTTGCAAGTGAC TGCAAAATCACAGGCTAATTTGTTATTGCAGTGTTAGATGGCATTGGAAAGGGCCTTGACGCCCGTTTTGATATTACTGA GATTGCCAAACCGTGAGCACCACCTTCATAGTTTATAATTTATAAAAATACTTTAAAAATATTGGAGTATTTGAACCTTC TACTTCTAGCTAATATAATTGGGACACCTTTGCCCAGCGGAGCTGGTGCTTTTGCTTAGTTTTGTTTACCTGTCTGTTTC TATTTCTTGGCCTTGCAGGTCTCCAACGTACCAAAATGTGATTAAAGTTTTAAAGTTGTTTGTTATGCATATCTAACGCA ACTATCTTTCCTGGCCTTGTAGTTATGCCCTGGAGTTGCTGAAATTCCGTGAGGCAGGAGTTGAAGTTGTCCTAAAGGCA GTCACAAACTTGTTCTACTGTGCTTTAATTCAGTCCAAGTATTATGATTTCCTTTCTCATATCCTTATTCTAAATGTACA GGACTTCAGAAAGAGATGGGACAGACAATCTCAAGCATTTTATAACTTATTTAGACAGGCTGATAGGGTTGAAAAGCTTG CCAACATTATTGAAAGATTGGTCTGTATTCGATTTTCACTAATTTGAGTCAATTAGTTGATTTGTATCATTTGTTTGTTC AGTATTTCTTTTTGGTATTCTAGATCTCATCTTGCTGAACTTCATTTCTCCACAGGAGCAAGGTGATCTAAAGCTCAGAG TACGGACTTTGGAATCTGAGAGGGCATTCCAACGTATTGCCACTGTGCAGAAAACAATACTGAATGTGAGTGAAGCTGGC CCTAGCTTGTTAAATTATAAATTTATTTGTTTCTTAGGATTTGGTTCATGTCTGTTTAAAAGCCTGTAAATGTTCATATA TTTGTCATTTTTGGACTATGCATGGCTTCAAACTAATTTTGACAAGTAACTGTTGGTTGCTGACTGTGAATCACGCATGT AATGGCAACAACTCATTAAATTATAGAAATTAAAATGGACACCTTTGCTACTTCATGTGCTACAATTAGTCAACTTACCT ACCTTTACATGATTGTACTTATCTTTTTATCAACTTTAAAAAATAAAAACAAAATTGGGACATTTGTGAGTCTTAGAATT CGAGGTAAGCCTAACTCTACCCAAAAGCTAGCTTAGAGGAGAGGGTTGTTCTACCCATGATAAACACTTATTTGGCCAAT CTCTAGTCAATGTGAGACTTCTAAATAGTGAGTGACCTCGCATGCAGGTGTATGCTCATATGTTGCATATGCTATGAATC AACTTTCTTTAATTTCCACATTACAAATCTTGTATTTTTAATTTCTTTAAATAAATTATGAGTGAACGATGGGCATGTAT AATTGTATATAGTTAGTCGACTCTTTACAAAAGTGCATGCCATGCATTTTTGTATTGTAAACCACATGCATGTTTCTTAT ATATAGTTTGTGTTATTTATGTATGAGACAAATGGTGAGAAAAACTGTTGGGCTAATAATGCATATTCATGTTGCCTTTT TTGTCTACTAACAGACAGTAGCTGCTGGAAGCCTAATAAACCTTGCAACAGTTCTGTATCTCAATTCAATCAGGGTAAGC TGTTCCCATTCCACTTGTCTTTCTTGTGGTGATTATCAAGTCAATTAATTTCTTATCTGGTGGTATTTACTCATTCATCA ATCACGTATTATATTTTTCAGGTTCCTGCCACTATAGCTTATTTCTTTTGTGCAATCTTTGGTTTTCAAGTTCTCTTTGG CATTTTCAAGATCAAGAAGTTAGATGAACGGGAACGGTTGATTACAGGGACAGCATAA
CDS sequence (LotjaGi4g1v0402100.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCGAATCCGCGCTGTCAAGGAAGAAGGTGCTGCAGTGGTTGACTTGGCGGAGAGAGCGAGCGATGTCAAATGGACTGG AAACGGTGCTGCTACTTCTGCTGCTGCACGAGGTAGCACTAATGGCTCTGTCAGAGGTTACGACTTGAATGGAAGCTTGG TGAAGTATGGGAGTGGGAATGGGAATGGAGCTGCGGCGGTGGCGGGAGGAGATTTTTCTGCTGAAGCGTCGAGCAAGAGG AAGAGGAGGTTGGAGGAGATTGGTAAAGAAGATGCGTGGTTTAAACAAAGTAAGGAACCGCAGGTTGAGGTGGCGGTTGC GCCTGGAGGTCGTTGGAGCAGGTTCAAGACTTACTCCACTATACAGAGAACGTTGGAGATTTGGGGATTTGTCATCACAT TTGTCTTCAAGTCTTGGCTGGATAGTAAGAAGTTTTCGTATAGAGGAGGAATGACTGAGGAAAAGCAAAAATTGAGGCGA AAGGCCCTTGCCAAGTGGCTGAAGGAAAGCATTCTAAGATTAGGTCCTACGTTTATCAAGATCGGACAACAATTCTCCAC GAGAGTGGACATTCTTCCTCAAGAATACGTTGACCAGTTGTCAGAACTTCAGGATCAAGTTCCTCCATTTCCCTCAAAGA CTGCTATAGCTATTGTTGAGGAAGAGCTTGGAGCTCCTTTAGCTAGCGTCTTTGATCAGTTTGAGTATGAACCAATAGCA GCTGCAAGTCTTGGCCAGGTTCATCGTGCGAGATTAAAGGGAGAGGAGGTTGTTGTCAAAGTGCAAAGGCCTGGTCTCAA GAGTCTTTTTGATATTGATCTTAAAAACCTGAGGGTTATTGCTGAATATCTTCAAAAAGTTGATCCTAAATCAGATGGTG CAAAGAGGGATTGGGTTGCTATTTATGATGAATGTGCCTCTGTTTTATATCAGGAGATTGACTACACCAAGGAAGCTGCT AATGCAGAACTATTTGCAAGTAACTTTAAGAATATGGATTATGTCAAAGTCCCTTCGATTTATTGGGACTATACAACACC ACAGATTCTGACAATGGAGTATGTTCCAGGGATTAAAATAAACAAAATACAAGCTTTAGATCAGCTAGGTGTTGACAGGA AAAGGTTAGGGAGATATGCTGTTGAGTCTTACTTGGAGCAGATTCTATCACATGGTTTCTTCCATGCTGACCCTCATCCT GGAAATATTGCAGTTGATGATGTCAATGGTGGAAGATTGATCTTTTATGATTTTGGAATGATGGGAAGTATCAGTCAAAA TATCCGAGAAGGTTTACTTGAAACTTTTTATGGAGTTTATGAGAAGGATCCAGATAAGGTCCTTCAAGCAATGATTCAAA TGGGCGTTCTTGTCCCAACTGGAGATATGACTGCCGTTAGACGAACAGCACAGTTCTTCCTCAATAGTTTTGAAGAGCGT CTGGTTGCACAAAGGAGAGAGAGAGAGTTGGCTGCAGCTGAACTGGGATTCAAAAAGCCACTAAGCAAAGAGGAAAAAGT AATGAAGAAGAAAGAACGTCTGGCTGCTATTGGTGAAGATTTATTATCCATTGCAGCAGACCAGCCCTTCCGGTTTCCTG CGACATTCACATTTGTTGTTAGAGCCTTCTCAGTGTTAGATGGCATTGGAAAGGGCCTTGACGCCCGTTTTGATATTACT GAGATTGCCAAACCTTATGCCCTGGAGTTGCTGAAATTCCGTGAGGCAGGAGTTGAAGTTGTCCTAAAGGCAGACTTCAG AAAGAGATGGGACAGACAATCTCAAGCATTTTATAACTTATTTAGACAGGCTGATAGGGTTGAAAAGCTTGCCAACATTA TTGAAAGATTGGAGCAAGGTGATCTAAAGCTCAGAGTACGGACTTTGGAATCTGAGAGGGCATTCCAACGTATTGCCACT GTGCAGAAAACAATACTGAATACAGTAGCTGCTGGAAGCCTAATAAACCTTGCAACAGTTCTGTATCTCAATTCAATCAG GGTTCCTGCCACTATAGCTTATTTCTTTTGTGCAATCTTTGGTTTTCAAGTTCTCTTTGGCATTTTCAAGATCAAGAAGT TAGATGAACGGGAACGGTTGATTACAGGGACAGCATAA
Protein sequence (LotjaGi4g1v0402100.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRIRAVKEEGAAVVDLAERASDVKWTGNGAATSAAARGSTNGSVRGYDLNGSLVKYGSGNGNGAAAVAGGDFSAEASSKR KRRLEEIGKEDAWFKQSKEPQVEVAVAPGGRWSRFKTYSTIQRTLEIWGFVITFVFKSWLDSKKFSYRGGMTEEKQKLRR KALAKWLKESILRLGPTFIKIGQQFSTRVDILPQEYVDQLSELQDQVPPFPSKTAIAIVEEELGAPLASVFDQFEYEPIA AASLGQVHRARLKGEEVVVKVQRPGLKSLFDIDLKNLRVIAEYLQKVDPKSDGAKRDWVAIYDECASVLYQEIDYTKEAA NAELFASNFKNMDYVKVPSIYWDYTTPQILTMEYVPGIKINKIQALDQLGVDRKRLGRYAVESYLEQILSHGFFHADPHP GNIAVDDVNGGRLIFYDFGMMGSISQNIREGLLETFYGVYEKDPDKVLQAMIQMGVLVPTGDMTAVRRTAQFFLNSFEER LVAQRRERELAAAELGFKKPLSKEEKVMKKKERLAAIGEDLLSIAADQPFRFPATFTFVVRAFSVLDGIGKGLDARFDIT EIAKPYALELLKFREAGVEVVLKADFRKRWDRQSQAFYNLFRQADRVEKLANIIERLEQGDLKLRVRTLESERAFQRIAT VQKTILNTVAAGSLINLATVLYLNSIRVPATIAYFFCAIFGFQVLFGIFKIKKLDERERLITGTA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 644 | 644 | - | – | |
| PANTHER | 24 | 704 | 681 | 0.0 | – | |
| PANTHER | 24 | 704 | 681 | 0.0 | – | |
| CDD | 203 | 451 | 249 | 2.25466E-112 | – | |
| SUPERFAMILY | 204 | 446 | 243 | 2.88E-31 | ||
| Pfam | 221 | 341 | 121 | 5.9E-38 | ||
| Coils | 474 | 494 | 21 | - | – | |
| Phobius | 645 | 665 | 21 | - | – | |
| Phobius | 666 | 670 | 5 | - | – | |
| TMHMM | 670 | 689 | 20 | - | – | |
| Phobius | 671 | 689 | 19 | - | – | |
| Phobius | 690 | 705 | 16 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0402100.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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