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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0406100 |
| Transcript ID | LotjaGi4g1v0406100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | RNA-binding protein 39; TAIR: AT5G09880.1 Splicing factor, CC1-like protein; Swiss-Prot: sp|Q14498|RBM39_HUMAN RNA-binding protein 39; TrEMBL-Plants: tr|G7LC87|G7LC87_MEDTR CC1-like splicing factor; Found in the gene: LotjaGi4g1v0406100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:78230667..78242494) extracted from Lotus japonicus Gifu genome v1.2.
TTTTAATTTAATTTTTTTTGGGAGTTCAAAGTTGTAGATTAGGGATACAGTAGGAACAAGCAAACTCCTTCTTCTTTCCT ATCTGTGTGGAAAAAGAAAACCCTAAAACCCTAGAAATCCACAATCCACCACCAAAACGCTTAATTTCTCTGCTGCGCGC GCACACCCACACTCACACACAGAGGAATCCGAACGATCCCAATGGACTTCGACGAGTACGAGTACTTGGAGAAGACAGTG GAGGAAGACCGCGACCCCTCCAAGAAGAAGAAGAGTAGCGACAGCGCCGACAAGACCGAGAGGACTTATCGGAAGCGCGA CCTCGAAGACGATCTCGACGGCGAAGAACGGCGGAGCCGGAGGTCGAGAGGCGACGACGAGAATGGCTCCAAGAAGGATC GTGACAGAGACCGAGACCGCGACCGTGACCGTGACCGGGATCGAGAACGCCGCCACAGGGAGAGGGATGGGGATAGGAGT GGTAGAGACAAAGAGAAGGATAAGGATAGGGACAAGGATAGGGATAAGGATAAGGATAGGGAGAAGGAGAGGGAGAGGAG AGATAAGGAGAGGGAAAAGGAACGTGGTCTAAGAGATAAGGAGAGGGAGCGAGAGAGGGAGAAGGAGAAGGAGGAGAGGG AGAGATCCAGGAGGAGCAGGAGTCGTTCCGAGAGAGAAAAGGAGAAGGAACCGGATTTCGCATCGAGAGATGGCAGGTAA TTGCTTAGTTCTGCGTTCTGTTTGTGAATTCCGTTTTGCATCTTCAATTCTGTGTTGGCTCCATTGTTTGTTTCTCCTTC TGGTTTGCATTAATGCTCATGATCATAGTGAAATGAAAACAAAAGTGCATTGGTGATGTGGTTTGTAATTCTTCTTTTAT GCTGGATTGGTGTGTCTCTTATACTATGTAGTTCACATTTTGCAGCTACTAGTTTGCTTGAGATTCATTTTCAGATTGTC TACCATTCAAAGTTTTGTCTGTGGTGATATGGACTATGGCTAACTATGTGCTTCTTGTTCATGTTGGTGTTCTATGCAAT CCATTTTTTCTTATTAAACCAGTGGTTGGAACGTTATACTGAATGCGTATTTCAGGTTTAATTCATTGCTATTCAGTTTG GGGTGTTATCATCATATCATTAATTTAATTATTGTTAATGCGATGCAATGCTAGCTTGGTGCACGCTAGATGATTACTGG CATGTATGCACACTATATGATTATCAAGTGTTGTTTTGTAGGTCTCTAATGTTAACTGTGTTATACTTGATAAAGTGAGA TTTAAAGACATTATTGTACCTGAACTCTCAAGATTAGATGCTGTTTTGGACTGTAATAATAATTATAACGATCTATATTT GGAATGATTCTATAGACCATCTGAATGTCAAATTCAACTAAGATGAAATTTTCTATTTATTATTTCTTACAGCTTGATTT TAATTTGAGTTGCAGGAGATTTAGGGATAAGAAAGAGGCTGGGGAACCTGAGGCAGACCCAGAAAGGGATCAGAGAACTG TTTTTGCATACCAGGTTGATTGGTTGCCCCATAAATTCGTTTATACGGTCTAACATATTCAGATATTTGACAATCTTTTA CTTATGATTTTCCATTTGCTCGGTGGTGACCACAGATGCCCTTAAAAGCCACAGAGAGAGACGTATATGAGTTCTTCTCA AAAGCTGGCAAGGTCAGTTGGTTTTAGTTATTTGATCTGCCATTGGATCTGCGATGCCTTGCATGTCAAAATAGATAGAA ACCTGTGTATTTTCTGTTCTCATTAGTACTGTGATGACTTCTATTGCCATTCTATTATTATTAATAGTATTATTATTATC TTATTTCAATACACTGATGGTCCTCAATTGCAATGAGTGATAACAATTGCAGAGAATCTAAAAGTTTTACATGCTTAACA AACACTTTTTGTACAGAGAAATTTGGTTGCTTTTGATGTATATTGTCTTCTCTTTTGGTAACAACTTACAAGTAAGATGT CAACTTTAATATGTTTGGACATTCAGTTTAATCATGTTGAGTGAATGAGACGTGACATTATGTTCACATTGCTACCAATT TGGTGTTTGTGTGTTTAGAGTTAATGTCTTACTTCTGCTTCTATCCAAGATACCTCCCTTATTCTAATACATTTAACGCT CCTTGTTTTTAGGTGAGAGATGTTCGTCTGATCATGGATAGGAACTCCAGACGATCTAAAGGAGTTGGGTATGTGCTTTA TTGTCAAATAATTTATCATTTGTATGGATGTGCTATTGGTATGAGGATATGAACTTCAAAGAATCATGTTTAACTGTATT CTTAAATGGATAGCAATGCGATATTGATGAGGGATGGTGGGGATACCTTGCACTCATGTTTAATCAATTCATGCTGCGTA CTCAAGGTAGATGACATAATCCTGGTTTTCTGCTTGGTCCTGTTACCAATTTTTTCCTTCGAATGCCATACAAGGAGGAT TTCATTTGTATGCTGATGACCCTTTTCAGTTTAGTTGTGAGGCTTGATAAGGTTGCTACAAAGTGGGTTCTGTTTTTTTT TTCTTCTTTTGAGCGGGAGATATATCTGACAAATAAGTTGCCATACTAAGCCAGCAGCTAGCTTAAGTTGGGTTCTTTAG GATTTGATTCACACTCATGCACATATATATAAGCAAAGGATGGGATTATGTTGCTTATCCTCCTTATCTAAATAGTTCCC TATCTTTATTTCATATGGTGTTGTCTTATTCTCTCTTGATATAATTGTCTATTTTATAATTAATATCTGCTTAGTTTTGT ATTGTTATTATGACAGACAGACTAACATTTTCTTTATATGAGTCAGATACAACAAAAGAAACTCAGCTTGAGCTGTCTGC ACTAGAGTTTTTGTTTCCTGCATCTCTTTGCTGTATTCTTTGTAAGTTTTGATTGCAACTGCATATTTTTTAGTTTTGAT ACTTGATGCAAGTTCTTGATGGGACTGCAGGTATATTGAATTTTATGATGCGATGTCAGTGCCAATGGCAATTGCTCTCT CTGGCCAACTTCTTCTTGGGCAACCTGTGATGGTGAAACCTTCTGAGGCTGAAAAGAACCTTGTTCAATCTAATGCTTCC AGTGGGGCTGCTGGAGTAGCAGGACCATATGGAGCAGTGGACAGAAAATTATATGTGGGGAATCTTCACTTTAACATGAC TGAGAGTCAGCTGCGAGAGGTATTTGATTGTTTTCCTTTTTTGCAGTCTCATTGGCTGTTGTGGGGAGGCAAATGTGTAG CATAATTTGTTTGGGGGGTGTTGACGACCTTTATCTGGAATATGAATGCATATGATTTTATTGAATACCTACTAAACTTA TTTCCCCTTTAAACCAATACGTTGGTGTTCTCTAAACTGGACCTAATTTGTAGGTTGGCACTGATTATAATTGTGATATT TTATCATCTTTTGACATTTATTTTGGTTGTTTTAGATTTTTGAGCCATTTGGTCCGGTTGAGGTTGTACAATTGCCTCTT GACATGGAGTCAGGACACTGCAAGGGTTTTGGGTTTGTTCAAGTTCGTTTCCAACCCTTAACTTTGAGGAATATTGCTTT TGGTAGTATTGTTATTTATCCCTTTAATTTGCACGCATTGGACAGTTTGCCCATCTTGAACATGCCAAGGCAGCTCAGAG TTTAAATGGGAAGTTGGAGATTGCTGGCAGGACTATCAAGGTATGTTAGATAAACTCAGAATTGTAAAAAGTGTTTATCA TTGATGATTGAAAAGCTAATGATACAAGAGACTGATTACAACTTATATAGAACTCTATAGCTTGTTCAACAAGCTTAACA AACTCAAACTCTAACTGACTCAGTTGACAGCTAAGCATCTAACTGACTCAGTTGACAGCTAAGCATAACCGCATAGCCTA ACTGAATTGCCAGCTCATTATAACAACCCTAGTGCTGACTGTTAGTACAGTCAGCAACTACTAAAGTGTAACTCTGTACA CATTCATACAATGTACTCTAATATCCTCCCGCAAACTCAAGGTGGGTGGGAAACCAGTTTCTCACACACATTGAGTTTGT TTCTAAGAGCCTCAAAACGAGTAGGAGAAAGAGCCTTGGTGAATATATCAGCAAGCTGATCAATAGAAGGCACATGCTGC ACATGAAGAGAATTATTGAGAACTTTTTCCCTGACAAAGAAGATATCAAGTTCCATATGCTTGGTGCGGGTGTGCAACAC AGGATTATGAGTTAAGGCCACTGCTCCCATATTATCACAGTAAATTCTTGGAGTAGAAAATGGAACATGAAGCTCATGAA GTAAGGATTGAATCCAAAGCAATTCTGCAGATGTATTGGCCAGACTTCTGTACTCTGCCTCAGTGCTAGAACGAGCTACT AGAGTTTGTTTCTTGGAAGCCCATGAAACCAAGTTAGGACCAAAGAAAATACAAGATCCGGAAGTGGACCTCCTATCATC AGGATCTGAGCCCCAATCAGCATCACAAAAAGCCTCCAAAGACACTAGTGAAGATAGAGAACAGGGCCTAATGTGTAAAC CATGATGAATAGTCCCTTTGAGATACCTAAGAATCCTTTTTACTGCCTTCCAATGTTCTTCCAGAGGTTGACTAAGAAAC TGGCAGACTTTATTAACTGAGTAGCTAATTTCTGGCCTAGTCAAGGTAGCATACTGCAATGCCCCAACTATAGATCTGTA AAGAGTTGGATTTTCAAAATAATCTGCACCAAATTTACTTAGTTTTGCACCACTAACCATTGGTGTTGAGATCCCCTTAG CATCAGCCATATCTGCCCTTTCCAGCAAATCACCAATATACTTGGACTGAGTTAAAAGAAGAGATCTATCCTGAAGATGT TGGACTTGTACACCAAGAAAATAATCCAACTTGCCCAATTGCTTTAAAGCAAATTCTGAATCAAGTTTAGTAACAATTTG TTGAACCAGTGAAAGAGAATTCCCAGTGATGATTATATCATCAACATAGACTAGGACATAAACACAATCTGTTGCTGTGT GGAGAGTGAAGAGAGAGGGATCACAACGGCTAGGTTTGAAACCATTTCTGACCAAAGCAGCCCTCAATTTCTCAAACCAA GCCCTTGGAGCTTGTTTGAGACCATACAAAGCTTTATTAAGCTTGCAAACCAGCTGCTTATCTTCTTGCTGAAAACCTGG TGGTTGTACCATATAAACTTCTTCTTGAAGGGCACCATGAAGGAAGGCATTATTCACATCAAGTTGGTGAATATGCCAAT GTTTAGTAACAGCCAAGGAAAGAATAAGCCTGATTGTGACTGGCTTTACAACTGGTGAGAAGGTTTCAGCATAATCAAAA CCATGCACTTGATCAAACCCCTTGGCCACTAGCCTAGCTTTATACCTATTGACAGAACCATCTGGATTTTCTTTCACCCT AAACACCCATTTGCAACCAATTGCCCTTCTATTGGAAGGAAGAGGAACAAGGGTCCATGTGTTGTTAGCAAGGAGAGCAT CATACTCAGCCTGCATAGCCTGAAGCCATTTAGGATCCTTCAAAGCCTGCTTAGTTGTTGTAGGTTCAGCTTGTGTAAGA AGCAATGTAGGGTGAAGCCTAGGTAACACAATCCCTGACTTAGCTCTAGTCTGCATGGGATGAACATTTCCCTGAGAAAT AACAGCTGCTGGTTGCTGAAATATGGACCCTGAGGAAGTAGGAGTGCCTGGAACAGCTGGAGAAGCACCGGAAGCAGTCT GCAAAGAGGGCATGGTCTCAACAGACGCAGTAGACCCAACTGCAGAAACAGGTGTACCTGGCTGAGGAGAAGGAACCACT GGAGCAGAATGTTGCTGCTCTTGGAGAGGAGCCAGTGTGTGACCATGTGGGACCAGTGGTATACAAGAAGAAATTCCCAA AGAAAAAGAGTCAGATACAGAGGAAGGAAACAATGTAGTGTAAGGAAATCTGAATTCATTGAATTTTACATCTTTGGAAA TATAAATCTTTCCATCACTATCTAGACATTTGTATCCTTGATGAGAAGAAGAGTAACCAAGGAACACACACTCTCTAGAC CTGAGCTCTAACTTGGAAGAATTATAGGGCCTCAAGTGAGGATAGCATGCACTTCCAAACACTCTCAAGATAGAGTAATC AGCTGGAACTTTAAACAGTTTGTGATAAGGGCTGAGATTACTCAAAACTGGTGTTGGAAGCCTATTGATGAGAAAGGCAG CTGTAAGGAAAGCATGATCCCAATATTGGGAAGGCATGTTAGCACAAGCTAGTAATGACAAACCAGTTTCCACTATATGA CGATGTTTTCTTTCCACACTTCCATTTTGATGGTGTGTGTGAGGACATGTAATTCTATGATCTATACCTGTTTTGACAAA GTGAGGAATGAGAGGCTTAAACTCTGTACCTCCATCAGTTTGTACTGATTTCAGTTTTGTACCAAATTTTAACTCAGCCA TTGCCTGGAATTGAAGAAAAACTGAGCTGGTTTCTGACTTTTTCTTAATTGGATATATCCAAGTAAACCTAGAGTAGGCA TCTACACAAGTTAGAAAATAAAGGCAACCAGAAGTACTTTCAACCGATGCAGGACCCCAAAGATCAGTAAAAATTAATTC CAAGGTTGTAGAATAACTAGTAGTAGAAGATGAGGAAGGTAAACGATGAGACTTAGCAACACAACAAGAATGACAAACAT GAAATTTTGATTTATTAGGAATTAGAATCTTACAAGTGGACAATGCATTGTGCAGAGCCTCATGATGAGGATGCCCTAAT CTATTATGCCATAAGTCATAAGAACTTTGGCTAGGTACAATACTAAAGGCAGAGTCACTAGGACTTGATACATCAGAATT ATTCTTGGAAACAGCAAAAACAGAAGGAAACTGAACAGGAAGAGAATTCTTGAGAAATGTGGAAGAGTGCATGCCATCAA AGGAGTACAGGCCATCCTTGCCAAGTGAGCCACGAAGAAGAACTCTAGAAGTGTCCTGTGATTTAACAACACAATGAAAA GGGTGAAACTCAAAGAAAACTCCATTGTCCTTGGCAAATTTGCTAACACTCACAAGGTTTTTGGTTATATCAGGCACTAA CAACAAGTTTTTAAGAGTAAGAGTGGTTTGTGTGTGATAAGGAGAAGGAAAAGAGGCAGAACCAACAGATTTTATAGCCA AACCTTTACCATTTCCCATCAGGATTTGATCACTACCAGCCACAGACACACTATCTGAAACTGCAGAGGCATCATGAGTG ACATGATGTGTTGCTCCTGAGTCTGGAAACCAAGTGCCAAGGTTAGAAGCAGAAGATGTTGGTCCTGTGAGCAACGCCTG TGGTGCTCGAGGATGTGGAGCAGAAGCACGAGGAAACATGCCAAAGGGAAGAGAGGCAGGTGCAGTAGGATACATCATAG CACTTGAAGGATAGGTAAAACCAGCACCAAATCCTGCTCCAGTAAACGGAACTCCAAACTGTGCAGAGGAACCAAACTGA GACATGCCTCTGAAAGGAGAGTAACCAAACTGTGGTAGCATGCCAAAATTAGGATTGAAACCAAGAAGTGAGGCTAAGGC AGCCTGTGGTAGAACACCACTGTGTGAAGGAGCCGCAGAAGAAGAAGAACTACCACGATGATAACAGATGCTTGCGTCAT GGCCATACTTGTGGCAGATCTGACATTGAACGGAACGATCGCCGCCACGTCCACCACGATTGGAACGACCACCACGTCCA CCGTAGTTATTGTAGCCACCACGATCGCCGCCATAACCGCGTGAGTCACTGGAGCGATTGCGATCATCAGATCCTGACGA GTCAACGCTACTAGCAGCGTAGTTGACCTCTGAGTTCACCGGCGGTGGAGGCGCAACTGTCGTCGGAGGTGGTGCAATAG GTGTCGCCGGTGATGGCGCAACCTGAGGCGACGGTGGTGGCGCAGATGCGTGAGCGAGAAACGCCGCTGGAGACGAAGTT TGCATCTGACGCACACGCGTGCGTTCCAAACGCGCTTCATGCGCGATGATCATCGCTTCAACCTGCGAGATCGAGCAAGG TTGATCGCGATTGTAAACAATCGTCATCAGAGAGCTATAATCATCTGGCAAACCATCAAAGATCGCTTCCAAGTGCTCGC GATACGAGATCGGGTCGCCAATCGTGACAAGAGCGTTCACGATCGACTTGATGCGTTTGAGAAAATCAGATGAACTCTTC GATCCTTTGGTAATGGTTCGCAATTCAGATCGAAGCTGTGTTGATTGCGCAATCGTCTGAGCCTGAAAGAAATCAAGCAC AGCTTGCCACACTTCCCACGACTGCTTGCAATTCACCACAGTTGGAAGCACAGAAGGCGAGAGTGAGGAGAGAAGCCACG TGAACAACGCTGAATCCTGCTGCTCCCAAACCTGATATGCAGGATTCTCGACTGCATTCTCACGATCTTGCTCACTGAGA AACCGCGGTGGAATCTCTGGATGAACAAGATAACTCTGTAACCTATGTGTACGAACAATGCCTTCAACGTGTTGCTTCCA GGAGAGAAAATTGGAGTCATCAAGCTTCAGCGTGAGCTTGTGAACCAACGTAGAAGAACTCAACTGTGATTGAGCAACAG CAACCGGAACTGGCATAGGAATTGCAGAAGCATGATCTGCATGAACTTCATCAGCCATGATGATGAAGAAGAGAAGAAAA ATCAGAAAAGGATCTCAAGGATCGTAGAAGGCTCTTGATACCATGTTAGATAAACTCAGAATTGTAAAAAGTGTTTATCA TTGATGATTGAAAAGCTAATGATACAAGAGACTGATTACAACTTATATAGAACTCTATAGCTTGTTCAACAAGCTTAACA AACTCAAACTCTAACTGACTCAGTTGACAGCTAAGCATCTAACTGACTCAGTTGACAGCTAAGCATAACCGCATAGCCTA ACTGAATTGCCAGCTCATTATAACAACCCTAGTGCTGACTGTTAGTACAGTCAGCAACTACTAAAGTGTAACTCTGTACA CATTCATACAATGTACTCTAATAGGGTAGGAATATTTGGGTTTTTTTTTCTTGCCTTACTTATCTGCTTTCAATTTTGTT GATGATCCTGTTCATTTGTTGTGACTGATTTTGTTCATCAAATTCAGGTTTCATCTGTAACGGATCATGTTGGAAGCCAA GATGCCGCTGCAAAATCTGCAGACTTAGACGATGATGAAGGTGGATTGGTATGTTTGTACTTTTTATATAATATATTTAT AGATTGGTTTGCATAGCTATTTTTGGTGTATGTTTATTTTTAGATTGTTAGAAGCTGATTGGCAAGAAGTTCTGTGTGGC ATTTTATATTTTTTACTTCAGAAAAGTTTTAGGCTTCTAGCTATAAATTTTTACAGATTAATGACAAGATTACTACTATT TGGTTGATAAGTGTATTGAAGTTCTAGTGCTGTTGAGGATTTGCACTTATTAGGTTACAAGTAAATTATAGACTTGAGTT AGATGTAGGTACTTTGATAATTTCCTCCTGCCTAATCTGGTTAAAGATCTTAGTTCTTTATTTTCTATGAATTTCATAGC TGCATTTTTCACTCTCTTTTCTACTGTAGAAGGTGCATTTCTTTCTATTTGGAGCTGGACCTAGGGGTTTTTATGAAACT ACTCTATCCTTCCCCCTTTCTGGTGCTGGTGTTTTTTAGGTGTAAAATAACAGTAGTCCTTCCCAATGCTTTTCTATGCA GACTTTAAATGCTCAATCAAGGGCGTTGCTGATGCAAAGGCTGGCTGGCGCTGATATTTCAACAAGGTTCGTTCATTACA TTTTCCTCTTATGTCGTAAATTTGTGCATTATCTTCACGGATTTCCAAAATTGCAGCGTTGGTGTGCCTATGATGAATGG ATCAGTTCCTGTTCAGCCCGCTTTTAGCTTGCCTATTGGTAATCCAGGTATTTTACCTGGTCAAGTATTGCCAGCACAAG TGCCTACCCCAGTGGTAGAACCTGTAGGTACCCCCAGCGAGTGTTTACTATTGAAGAATATGTTTGATCCAAGCACTGAG GTCTGTGATGAAATGATTATATACTTGCACCATATTATTTTCCATTTAAAGAAGTACTGATGACAAATATTAAAATGCAG ACGGAACCAGATTTTGATTTAGACATTAAAGAGGATGTAGAGGAAGAGTGTTCGAAATATGGCCGGGTGAAGCATATTTA TGTTGACAAGTAAGTACATTAATGTGTTGGTCACTTCAATTGTCATGAATAGTTTTACTGTGTACTTTATTTTGTTTATT TCCACCTTTTACATGAGTGGCAATTCTTTAATTATTTTTGCATATATACAGAAGAAGTGCAGGTTTTGTGTATCTGCGGT TTGATACAGTGGAAGGAGCCAGTGGTGCTCAACGAGCAATGCACTTGAGATGGTTTGCACGGAGGTTAATTTCAGCTATC TTCATGGTAATCTTTTAATATTCTTGATTTCTCTCTTGCTTGTATTCAGATCTAAATATCTAATATAGACAAAGTCTGAG ATTGTCTCTTCAGCAATGCCATTTTGCTATCTTTTCACTTCAGTGGTGTTTGGGGATTTTGTTTTAATTTTGTCTTTCCA TCAATGTTTGGGATGTATAAACTCTACGGGTTTGTGTATATTTTTTTCTGTTTTCGTCCCGAGTTGTAGTTATTTGGAAA AATAGCTTAGAGCTCTTCAGTAAACTTCATGGGGTTCTATATTTGACGGAGGTTGTTTTTTTGGAATAAGAGGGTTAATG TTCATATGTATGATAATCACATTATCACTGTCATTCTGAGCCCTATATCCTGCAAAAGCCTTCATCTAGATCATATTTTA TGAAATTGTTTTGTTTTGCAGCAACCAGAGTTATATGAAGCCAAATTTAAAGGGGAATCTTGAAGAAGTGCGCATAGTTC TCTAGGCCCTAAGATACAAATCTGTTCAATTTTGTGGTCATAGTTTTCATAAATGAAGTCTGGTTTATAGTTTTTGATTC ATGAATTGTACTAGATGTATGGTTTACAGAAATTGTAATGCCAGAGGATGGTGATATTTATGACCAGTTTACCATTTTGA ATATCGATGTATTTTAACAATCATTCCATCACATTTTATCCTCTGTTTTGTGTATTATGTAGAATAATTACTCCTATATT AACATTTTTCTTTGAAGTTTTTTGGCCTTTTGAAATTAATTTATTTTACCATGAAATTACTAGGTCGTGAATATTTTAAT TTAACAGACAAAAGCCGCTGGCCCTAAGTATCATCGGTGTTTGAGCGTTACATATAGGGCGCCCCCATCAAATCCCAGCC GAAAATAAATTACTTTAGATAATGGTTGGTTAGTCCTTTCTTTTAAAAATATGTGATGTGATTTCCATGTGTTATAATTT TTATAATCTTTTATCTTGGCTAAAAAGCATTTTTGACCCCTGATGTTTTAAGTTGGTGTAAATTCTGCCCCTACTCTATT TTTGTCGATGGTTCTACTCCTCATGTTTTCAAACAGTGCACCGTCTACCCCTCCGTGTCAGTCTAGACGTTAAAAAACTA ACGGAATGAGCTGATTTGACTTTTTTTTAATATTTTTTGGACCTGCAACGTGGAAATTACAAATGAAATTGGAAAAAGGG GCATGAGAGATTCAAACTCAAGACCTGTAAGTAGCAAAACATGCATTTAACCAGTTCAGTTACATACATAATTGATATAT ACATCAAACAAATTTAATTTATATCATTTCCTTGATCATCACCAACTTCATATACTCCTCTTCATCTC
CDS sequence (LotjaGi4g1v0406100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGACTTCGACGAGTACGAGTACTTGGAGAAGACAGTGGAGGAAGACCGCGACCCCTCCAAGAAGAAGAAGAGTAGCGA CAGCGCCGACAAGACCGAGAGGACTTATCGGAAGCGCGACCTCGAAGACGATCTCGACGGCGAAGAACGGCGGAGCCGGA GGTCGAGAGGCGACGACGAGAATGGCTCCAAGAAGGATCGTGACAGAGACCGAGACCGCGACCGTGACCGTGACCGGGAT CGAGAACGCCGCCACAGGGAGAGGGATGGGGATAGGAGTGGTAGAGACAAAGAGAAGGATAAGGATAGGGACAAGGATAG GGATAAGGATAAGGATAGGGAGAAGGAGAGGGAGAGGAGAGATAAGGAGAGGGAAAAGGAACGTGGTCTAAGAGATAAGG AGAGGGAGCGAGAGAGGGAGAAGGAGAAGGAGGAGAGGGAGAGATCCAGGAGGAGCAGGAGTCGTTCCGAGAGAGAAAAG GAGAAGGAACCGGATTTCGCATCGAGAGATGGCAGGAGATTTAGGGATAAGAAAGAGGCTGGGGAACCTGAGGCAGACCC AGAAAGGGATCAGAGAACTGTTTTTGCATACCAGATGCCCTTAAAAGCCACAGAGAGAGACGTATATGAGTTCTTCTCAA AAGCTGGCAAGGTGAGAGATGTTCGTCTGATCATGGATAGGAACTCCAGACGATCTAAAGGAGTTGGGTATATTGAATTT TATGATGCGATGTCAGTGCCAATGGCAATTGCTCTCTCTGGCCAACTTCTTCTTGGGCAACCTGTGATGGTGAAACCTTC TGAGGCTGAAAAGAACCTTGTTCAATCTAATGCTTCCAGTGGGGCTGCTGGAGTAGCAGGACCATATGGAGCAGTGGACA GAAAATTATATGTGGGGAATCTTCACTTTAACATGACTGAGAGTCAGCTGCGAGAGATTTTTGAGCCATTTGGTCCGGTT GAGGTTGTACAATTGCCTCTTGACATGGAGTCAGGACACTGCAAGGGTTTTGGGTTTGTTCAATTTGCCCATCTTGAACA TGCCAAGGCAGCTCAGAGTTTAAATGGGAAGTTGGAGATTGCTGGCAGGACTATCAAGGTTTCATCTGTAACGGATCATG TTGGAAGCCAAGATGCCGCTGCAAAATCTGCAGACTTAGACGATGATGAAGGTGGATTGACTTTAAATGCTCAATCAAGG GCGTTGCTGATGCAAAGGCTGGCTGGCGCTGATATTTCAACAAGCGTTGGTGTGCCTATGATGAATGGATCAGTTCCTGT TCAGCCCGCTTTTAGCTTGCCTATTGGTAATCCAGGTATTTTACCTGGTCAAGTATTGCCAGCACAAGTGCCTACCCCAG TGGTAGAACCTGTAGGTACCCCCAGCGAGTGTTTACTATTGAAGAATATGTTTGATCCAAGCACTGAGACGGAACCAGAT TTTGATTTAGACATTAAAGAGGATGTAGAGGAAGAGTGTTCGAAATATGGCCGGGTGAAGCATATTTATGTTGACAAAAG AAGTGCAGGTTTTGTGTATCTGCGGTTTGATACAGTGGAAGGAGCCAGTGGTGCTCAACGAGCAATGCACTTGAGATGGT TTGCACGGAGGTTAATTTCAGCTATCTTCATGCAACCAGAGTTATATGAAGCCAAATTTAAAGGGGAATCTTGA
Protein sequence (LotjaGi4g1v0406100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDFDEYEYLEKTVEEDRDPSKKKKSSDSADKTERTYRKRDLEDDLDGEERRSRRSRGDDENGSKKDRDRDRDRDRDRDRD RERRHRERDGDRSGRDKEKDKDRDKDRDKDKDREKERERRDKEREKERGLRDKEREREREKEKEERERSRRSRSRSEREK EKEPDFASRDGRRFRDKKEAGEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEF YDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNASSGAAGVAGPYGAVDRKLYVGNLHFNMTESQLREIFEPFGPV EVVQLPLDMESGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHVGSQDAAAKSADLDDDEGGLTLNAQSR ALLMQRLAGADISTSVGVPMMNGSVPVQPAFSLPIGNPGILPGQVLPAQVPTPVVEPVGTPSECLLLKNMFDPSTETEPD FDLDIKEDVEEECSKYGRVKHIYVDKRSAGFVYLRFDTVEGASGAQRAMHLRWFARRLISAIFMQPELYEAKFKGES
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 193 | 193 | - | – | |
| MobiDBLite | 10 | 191 | 182 | - | – | |
| TIGRFAM | 77 | 553 | 477 | 3.4E-164 | ||
| Coils | 113 | 159 | 47 | - | – | |
| Gene3D | 118 | 280 | 163 | 1.4E-26 | ||
| PANTHER | 158 | 544 | 387 | 8.8E-208 | – | |
| PANTHER | 158 | 544 | 387 | 8.8E-208 | – | |
| SUPERFAMILY | 186 | 276 | 91 | 5.91E-21 | ||
| ProSiteProfiles | 192 | 269 | 78 | 15.426 | ||
| SMART | 193 | 265 | 73 | 6.4E-17 | ||
| CDD | 193 | 265 | 73 | 6.47442E-45 | – | |
| Pfam | 199 | 261 | 63 | 1.4E-10 | ||
| Gene3D | 290 | 386 | 97 | 4.9E-26 | ||
| SUPERFAMILY | 294 | 546 | 253 | 4.37E-30 | ||
| ProSiteProfiles | 294 | 372 | 79 | 18.325 | ||
| SMART | 295 | 368 | 74 | 3.5E-26 | ||
| CDD | 296 | 368 | 73 | 2.61694E-32 | – | |
| Pfam | 296 | 366 | 71 | 4.9E-20 | ||
| Pfam | 387 | 480 | 94 | 3.6E-18 | ||
| Gene3D | 458 | 557 | 100 | 9.8E-30 | ||
| CDD | 462 | 544 | 83 | 1.88349E-37 | – | |
| SMART | 464 | 541 | 78 | 0.02 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. | ||
| Molecular function | RNA binding | Interacting selectively and non-covalently with an RNA molecule or a portion thereof. | ||
| Cellular component | Nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. | ||
| Biological process | MRNA processing | Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide. |
Expression pattern of LotjaGi4g1v0406100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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