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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0415500 |
| Transcript ID | LotjaGi4g1v0415500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | DDT domain-containing; TAIR: AT5G08630.1 DDT domain-containing protein; Swiss-Prot: sp|Q9NRL2|BAZ1A_HUMAN Bromodomain adjacent to zinc finger domain protein 1A; TrEMBL-Plants: tr|G7LFT5|G7LFT5_MEDTR Nucleosome/chromatin assembly factor group protein, putative; Found in the gene: LotjaGi4g1v0415500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:79098506..79105402) extracted from Lotus japonicus Gifu genome v1.2.
GGAGTAAGCAAAAACGTGAGAAACTTCTTCGTTCTCAAAACCAGAATACACACCTTCCCCTCTCTCTCTCTCTCTCGCTT CTCCGCACACATTCACCACCTTCTGCACTGTAAGATCCTCTCTCTCTCTTCCTCTCTCACACACTCTCTCTCTCTCTACA TTCATGCATTTTCTCAATCTACGTAGTTTGAATTTGTTGATTTTTGTTTCACTGTTGCCAATTCGGTTGTGGCGGGAACC AAGGTTTTTCGCCGTCGTCGTCGGCGATGCGCGGTTTTCTTGCATCCCCTTTTTCGATTTTCATTGTGAATGTGGCGTTG CGTCTCTGTTCAGTTCTCTGATCGAGTTTTTGACATCGGTGCTGCAGAATTGCAGCGCCGTTTGCGGTTTTTTGGTACCT GAATAGTTCGTGCGTTATTGAATCCCTAAATGGGTGCATTTTAGGGTTTCCTTTTGTTTTGTTGTATTGGGGTTTCTTCT GTGGACACTGGGGTGCTGTGAGTTTTGATTTTCAATGGTGGGGTTTGCTCAATTTGCATTTATTCAAAGTAAAATCATGT GTGTAGTTAAATTCTTTTGTTTTGTTTTTGGGGGTTGGAACTGAACATCTCGGGGTTTCGTCTGAATCTGGTTTGGCATT TTTACCTCAGTGGCATTGGTTTTAGACTTGGTTTTTGTGATGGGGTGTTATTCAATTTTGTATGGATGGGTTTGTCTTTG CATTAATGGGATGAGAGTTTCTTAGGGTTCCTGCTTAAGAGATACATAACTTTGATTATTGGATTTGAATGGCATGCGAC TGCGGGGCAGTTCTAAACATGCTTCAGCGACTGAAAGTGTGTCTGCTTATTTTGTGTTAAACTTGACTTGCATTTTCATT TGGGTAGTTTTTAAATTAGCTGTGATTTGCGAGGGAGCAAGTAGAAAACAACGAGGTCATTTTTATTTTTTTCATTCGAA TCACAATTCACAGATTTTATGGTTTTCTTACATAATTGTCAAAACAAATTTTTGGGCTAAGGTAGATTATGATTCACATT CTGGATTCTGAATTGTGGCTGCTAATAGTTTTTGTTCAGGGACTGTTGATATTTTTATTTTCATGAATGGAACTATTAAG ATCATACCGCTGAAAGGTTTATGTTCTGTTAAACTCTCAATGCAGGGTGCAGACGGGAGGTGAGGTTCTTTCACAATGCC TCTTTTGAGGAGAAAGGCTTTTGCCTTGGTTGAGCCTCCTGAGGATTTGAAGCTAGATGAGCAGGTTTACACAATTCGGT ATACAAAAGAAATATTTCGAGATTATCCGTATCCTTTGTAGTCATATATTTTTGTTGTTTTATTTTTCTAATTGCCTTTA ACTGGTAAAGTGTTTAAAAGGTGATTAATATGTAAAACTTAGCATGTTAGACCACCTGTAGTATTCCATATTAGTTCCTG CAGGGAGAGGATATTGCTGGTTTTGCCTTAACATAGAGTAGTGATTATTTGAAACGATTGAGTCTATACCGCCAGAGGGT TTGGACGTGTAATTTCACTGGAAAAACTGGCCTGACTTATGAAGAAGCTTTGGTGTCAGAACAACGAGCCAATGAGAAAG TCCAACAGATTCCTAAAGAATTCATGGCTTCTGCTTTAAGAATCATTCAGTACAGTAAGAACTACCTTCTTCTAAGATGA GGAAATATATGTTGATACAATGATGCATCCATTTTTTATTTTTCATCTCTTGTTACAGATAATTTCTTTTTGTTCTACGT GAGTAATTCTAATTTATGCAATTCAGTAATTCCTGTTGAATCTTCTGACTCTAAGAATGCGTGATAGTCAATGTAGACGG TGGTTAATATATATATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTACATGTGAAGTTGCATCTGT TTATGGAATCTGATGTTTATGTTTAATCCCACAGAGCTAGTGAGTTGTGTGGTGTTGCTAACTTAAATGGCTGGAACAAA ATGTGATTTTATTTTGATCCAATATTGGCATTCAATTATTGAGCAGTTAAAGTAGCTATGATTTATGTGCTGCACGAAAG TTTTGGGGGGGGGGGTCCTATTTTGTTTGGATGTGTGATTGTCTAGTGTCTATCAAAGGGTTCACACTAAGCATTCTGTT CTTATTTAATAATCAGCAGACTCAGAACAATATTTTATTAATTTGCTACATATGTTTCAGGGCACATAGTGCCTCCAGTT GATCTTTTATAAATTATAATATCATGTCATGGGTCTCGTGTTTCCTGACCTTTGTGAACCAGAACCTGATTGAAGATGAG TTGGCTGTGGCTAACTATATGCTAGTTCATTGCATTAGTACATTACTTTGCAGCTGGTGAAACAAATCATAAATTACATT GAGTCTCTTCATGTATGTCAATCAGGATAATCATCATAACATTTATGATTTATGTCTGCATCTGTTGACATGAAGACCAT CAGAATTAAGGTTTAATATATTTTTATTTTCCACTTATTGCTTAAATTGTGAGACCTCAATAGAGATCATCACGTTTGGT CATAGAATGCTGTACAGAAATTGAATGTTTTCTAAGTCATCTTATGGATGTATATTAAAGGACTCTTAGGAAATCCTTGG TGTCATGAGTGCTGATTCTTTGGTGATTCGTCTTCTTTCTGAGGTATATCTTCGATGAAATTATATAAGGGTAATAATGC TGACAGCACTTGCATAGTTCAAGTTGAAGTGGTTAAGTGGTGGTGTAGCTTATCTGGATTTAAAGGTTTATGTTCACTTA GGAAAAATAGTAATAGAAATGTTTTTTTAGAAAGCAATGTAATAGAAATGTTTCTGAGAAACTTGAAATTGCAAAAACTC TACCTGTTGAAGAATTGCTTTATACAAACGTTATTGGGATGTCTGCTAGCTCTTAATTCAAGTTTGGTTATACAATTACA TTTGCTTTTTATTCTTAACTGGACTGATTAGTGATCTATGTTATTGTAGGTATGCTCCCTTTGAAGGATCTTGCCGATTC AATTGCTGAAAAATTGAATGAACGTTTGTTTGTGGGTGCTGAAGTGTATGGGAAAAAGGATGATGGAGTATGTCCATGCA AAATATTAAAAGTCATCAAGAAAGGAGTTGACCAATTATGTTATGAGGTAGCTTGGCTCGACAAAAACAAGAATATAAGT GAAAAAGCCGAAATCAGTGCAGAAGATTTGGTGCAAAAGAAGCCGCTTTTTAGTAGAAATACGTTGAAGTCCTTTATTCG GGAATCTACATATCGCAACGCCCCTTGGGTTTTAAATGAAGAGCTGGCACTAAATCATGGAATCTCAACTGAAATTCCTC AGGAGTTGAAAGAAAGGGTTTTTTTCAAAGACGGACTTATTGTTTGCTCCAAGAAAAGGAAAAATGAGGTAGATAGAAGA AGAGAAACACAATATTTACTGTTTATTTTTCGCTTCCCTACAAAAAAATAATATTATTGATAACTGGGAAACAGTACAAC AACAAATCCTAATTTGATTCGTTATTTGGTAAATGAATTTATGATGTTATTTTCTGTCTCAAATTTATCATGTTCAGGAT GAAACTGAAAACTCTAAAAGGAAGAAGTTGGATGGGAAACTAGTCAATGGTTCTGCCGAAGAGAAAGGTAGATTTTAGAG GTTAAACCCTTTTTGGCTGCATGTGGATTTGATCTTATGATTATAACCTTTTATTGTGCAGTTGTTTAAATAACATGTTT ATTGTTTTCTAGATATATAATATAAAACTATTCATGCACCTTCAGTCCTCCACCCTTAAACTTTTGGCATAGTTGGTAAA TGACATTAGAGCCTTGACCAAGTGGTTTGGACTCTGGAGTTCGATTATTGTTTTCCCCAATAATTCTAATAAAAACTCCA ATTTAAGCACAAGATAGGTGGGTATGTGCTTTCTTCACACTTCAAGCCCAATGGGCTCTTGCATCATGTGGCATGTTAGA AATATAATATAAAACTACTCATGTGTGTCTTCATGCAATAACTTAAACTTTTGGGATGGTTTACACTGATCAAACACCAT TTTGATTAGCTTGAGTTTTGAAATTCATTTTCCCCCAGTCTTATTTCTGTTTTGTTGTAATTGGGTGTGTGGAGGACTAG GTGTATCTCTTGTTGTGTATCTAAATAGAAGGCATTTCATCTTATGGTTTAGAAATTAAGGCATTTCATGTTATGTATTG TATCTTACAAAATAAACTTAAACTCCCTTCTCTTGTGATTTTAGTTTTATCTAAAATGCTGTCTCTGTCTTGAATTTCCC AGAACCAATCAAATATCCCATTGATGATCTATTGGTGAAGCGTAGTGCAGATGATCCTGTTTTCACCGATCGTCCCTCTC CAACAAGAGACTTCAGTGTTCCAATGTTTTGTGTAGGGGATCTCTTAATGGTTTGGGATTTTTGTGCTTCTTTTGGTAAA CCTTTGAACCTGTGGCCCTACTCTCTAGAAGATTTTGAAAATGCAATCTGCCATAAAGATAGCAATGTGGTCCTCCTTGT GGAATCTCACGCGGCACTTTTTCGTGTTCTGATCAAAGAGGATGGTGAATACTCTTCTATTGTTAAGAAACGGAAGGTTG CCTTCTAACTTTCAATTTGTTAGTATCATCAATTGATAATTTGTCTATATCCTTGTGACTGCTTAATGCTTATGCCATTG TTATTTTGATATGACAATATATCACTCATTTTTATTTTCAGATTACACTGATTAATTGGACAGAATATTTATGTGATTTT CTACAAATGATCAATATTCCTGCTCTCCGGCAACATGAAGGAACCATAAAGCGGGGACATTATGGCCTGTTAGATGCCAA TGTTAAATTAGGAATCTTATCTGAATTGGTCAATCAAGTACTAGAAACTGGAACTTTCAGGGAAACGATGGATGAGTTAA TGGAACAGCGGCAGGCACTTGGGGCCTCTAGAAGGGAAGAAGCACTGGAGGAGGGTAGGAGGAGAAGAGAAGAAAAGGAG CGGTTGAAAGCTGAGTTAGAAAGCAATGGAATTATGAATGGGCATCATCCAAACAGTGCAAATGGAGATGTGGGAAAGAA AAGTAATGGAGAGATACAAAATGGAGACGTGGGAAAGAAAAGTAATGGAAAGATAGAATCCTCCAGGCAAAACAATCCAT TGGGCGCGAGGTTCGAATTCATCAAGTGCACTGTTATGCTTGCCTTACTTATATATGTACAGATTACATTCTTTTGTTTG GTGGTAATTGCATCTCACTTTTTTGTCTTAAAAATTAATTTGCAGTGGGACCAAGCATTCAAATTCTGCTTCTAAAAAAA TTCCTACGAAGTTGAATTCTGAGCTGAAAGAACCAGTAGAAAATGGAAAAGATATATTGAAACAGTCAAAGGGTGACAAG GATCCATCAGAGAAAAATAGTAAACAGAAGGTGCGGCCTATCTCCCTGCTTAAATTACTTTCTTTTCTTTAATTGATCTT CTATTGACTCTCTCTAGTCTCATACAGAAAGAATATTTTCAAAAGGAGATGGAGAAACGATTGATTCGTAGAAGCCCATT AGGTCAGGACAGAGAGCGCAATAGGTATTGGTGGTTTCATCGTGATTGGAGGATATTCGTTGAAAACAAAGACTCCACGG TGTGGGGATACTACAGCAGCAAGGAAGAGGTACTAGTTGAAGATAGCTTGCTATCTTTGCATTCTGTATGTATTTCTTTT CTGATTTTCTGTTGGCATGTTTGAATAGCTTGATGCGTTGATGGGTTCACTGAATTGCAAGGGTGTGCGAGAGAGAGCAC TGCAGAAACAACTGGAAAAGTATTATAGTAGTATATGGTAAGTTAGATTTGCTTTTCAATATATGACTTGCATGGAATGT CTTGATAGTTTTCTTTTCCCTTGTTTTCTATTCCCATACTACTTGATGAATACATGATACCTCAACAAAAGCTTGGTTTT AAACTTGTAGTCCAACAGACAACTTTGAATTATAATTCTTTTTTCTTTCCTTTGCATCTATACAGCTCAGAACTCCGGAA AAGATCGAAGGATTTGATGTCCAATACTGCAAGTGATGAATCCGTGCTTCGAAGGTCTACTCGTGTTCGAGCTCCACCTC GGCAAAATCCTGCCAATGCTTTCCTCAGATATGCTAACAAGTGGAAAGAAGAGTGAGTGATATGAGGAGGAATAAATAAC GTTTACCTTAAACCTGATTAAACCTATAACTTTTAATAGAGCAAGTTGGTTCATATTTTGAAGTAGGGATTAAGTAGGTT TTGGATCCATTTTTCGATGATGGACAAGCATGTATATGCTTGTTTCTGAAATTTTGTACGAATTTTACCAATCTTCGATA AATAGTAGAAACTGGTACAATGTAAGGCCTATTTTTGGTCGAAGATATGATTTCTTTTACTCCCTTTTTTATTTGAAAAA TCCATAGTAGGGATACTGCCCAGGCGTTATGACATGCTATGGAAGCAAATGGTGAGCATAAACCATTTACCAACCAAACC CTGAGCTAGCCAACATCTTGTTTTGGCATTTAAGCGAGTGATGCCCGGTAATCGGGGAAGAAAAGGTGGAAAATCAGCTC CAAATGGTTTTGTGCAGCGGCTGAGGAGTTTTTTTCCCTGTTGGGAACTTGCCTTGACTGATCTTGTGTCATTTTCACTT CTCCCATAGCCGCATCCCCTCCCCTCTCATTTCTTCCATTTTCAATTTTGCCCAATGGTTCCACCTTCTTCCTTTTCTGT TTCTCCTCCCACCCTGCCGCACAACTTTGTCCCATACTCACTTCTCTCCTTTCTATCACTTCCTTTCTGGCCAAGCGCTT CCTTCCTTCATTTCTTT
CDS sequence (LotjaGi4g1v0415500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCTCTTTTGAGGAGAAAGGCTTTTGCCTTGGTTGAGCCTCCTGAGGATTTGAAGCTAGATGAGCAGGTTTACACAAT TCGGTATACAAAAGAAATATTTCGAGATTATCCTGATTATTTGAAACGATTGAGTCTATACCGCCAGAGGGTTTGGACGT GTAATTTCACTGGAAAAACTGGCCTGACTTATGAAGAAGCTTTGGTGTCAGAACAACGAGCCAATGAGAAAGTCCAACAG ATTCCTAAAGAATTCATGGCTTCTGCTTTAAGAATCATTCAGTACAGTATGCTCCCTTTGAAGGATCTTGCCGATTCAAT TGCTGAAAAATTGAATGAACGTTTGTTTGTGGGTGCTGAAGTGTATGGGAAAAAGGATGATGGAGTATGTCCATGCAAAA TATTAAAAGTCATCAAGAAAGGAGTTGACCAATTATGTTATGAGGTAGCTTGGCTCGACAAAAACAAGAATATAAGTGAA AAAGCCGAAATCAGTGCAGAAGATTTGGTGCAAAAGAAGCCGCTTTTTAGTAGAAATACGTTGAAGTCCTTTATTCGGGA ATCTACATATCGCAACGCCCCTTGGGTTTTAAATGAAGAGCTGGCACTAAATCATGGAATCTCAACTGAAATTCCTCAGG AGTTGAAAGAAAGGGTTTTTTTCAAAGACGGACTTATTGTTTGCTCCAAGAAAAGGAAAAATGAGGATGAAACTGAAAAC TCTAAAAGGAAGAAGTTGGATGGGAAACTAGTCAATGGTTCTGCCGAAGAGAAAGAACCAATCAAATATCCCATTGATGA TCTATTGGTGAAGCGTAGTGCAGATGATCCTGTTTTCACCGATCGTCCCTCTCCAACAAGAGACTTCAGTGTTCCAATGT TTTGTGTAGGGGATCTCTTAATGGTTTGGGATTTTTGTGCTTCTTTTGGTAAACCTTTGAACCTGTGGCCCTACTCTCTA GAAGATTTTGAAAATGCAATCTGCCATAAAGATAGCAATGTGGTCCTCCTTGTGGAATCTCACGCGGCACTTTTTCGTGT TCTGATCAAAGAGGATGGTGAATACTCTTCTATTGTTAAGAAACGGAAGATTACACTGATTAATTGGACAGAATATTTAT GTGATTTTCTACAAATGATCAATATTCCTGCTCTCCGGCAACATGAAGGAACCATAAAGCGGGGACATTATGGCCTGTTA GATGCCAATGTTAAATTAGGAATCTTATCTGAATTGGTCAATCAAGTACTAGAAACTGGAACTTTCAGGGAAACGATGGA TGAGTTAATGGAACAGCGGCAGGCACTTGGGGCCTCTAGAAGGGAAGAAGCACTGGAGGAGGGTAGGAGGAGAAGAGAAG AAAAGGAGCGGTTGAAAGCTGAGTTAGAAAGCAATGGAATTATGAATGGGCATCATCCAAACAGTGCAAATGGAGATGTG GGAAAGAAAAGTAATGGAGAGATACAAAATGGAGACGTGGGAAAGAAAAGTAATGGAAAGATAGAATCCTCCAGGCAAAA CAATCCATTGGGCGCGAGTGGGACCAAGCATTCAAATTCTGCTTCTAAAAAAATTCCTACGAAGTTGAATTCTGAGCTGA AAGAACCAGTAGAAAATGGAAAAGATATATTGAAACAGTCAAAGGGTGACAAGGATCCATCAGAGAAAAATAGTAAACAG AAGAAAGAATATTTTCAAAAGGAGATGGAGAAACGATTGATTCGTAGAAGCCCATTAGGTCAGGACAGAGAGCGCAATAG GTATTGGTGGTTTCATCGTGATTGGAGGATATTCGTTGAAAACAAAGACTCCACGGTGTGGGGATACTACAGCAGCAAGG AAGAGCTTGATGCGTTGATGGGTTCACTGAATTGCAAGGGTGTGCGAGAGAGAGCACTGCAGAAACAACTGGAAAAGTAT TATAGTAGTATATGCTCAGAACTCCGGAAAAGATCGAAGGATTTGATGTCCAATACTGCAAGTGATGAATCCGTGCTTCG AAGGTCTACTCGTGTTCGAGCTCCACCTCGGCAAAATCCTGCCAATGCTTTCCTCAGATATGCTAACAAGTGGAAAGAAG AGTGA
Protein sequence (LotjaGi4g1v0415500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPLLRRKAFALVEPPEDLKLDEQVYTIRYTKEIFRDYPDYLKRLSLYRQRVWTCNFTGKTGLTYEEALVSEQRANEKVQQ IPKEFMASALRIIQYSMLPLKDLADSIAEKLNERLFVGAEVYGKKDDGVCPCKILKVIKKGVDQLCYEVAWLDKNKNISE KAEISAEDLVQKKPLFSRNTLKSFIRESTYRNAPWVLNEELALNHGISTEIPQELKERVFFKDGLIVCSKKRKNEDETEN SKRKKLDGKLVNGSAEEKEPIKYPIDDLLVKRSADDPVFTDRPSPTRDFSVPMFCVGDLLMVWDFCASFGKPLNLWPYSL EDFENAICHKDSNVVLLVESHAALFRVLIKEDGEYSSIVKKRKITLINWTEYLCDFLQMINIPALRQHEGTIKRGHYGLL DANVKLGILSELVNQVLETGTFRETMDELMEQRQALGASRREEALEEGRRRREEKERLKAELESNGIMNGHHPNSANGDV GKKSNGEIQNGDVGKKSNGKIESSRQNNPLGASGTKHSNSASKKIPTKLNSELKEPVENGKDILKQSKGDKDPSEKNSKQ KKEYFQKEMEKRLIRRSPLGQDRERNRYWWFHRDWRIFVENKDSTVWGYYSSKEELDALMGSLNCKGVRERALQKQLEKY YSSICSELRKRSKDLMSNTASDESVLRRSTRVRAPPRQNPANAFLRYANKWKEE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 692 | 692 | 2.3E-248 | – | |
| ProSiteProfiles | 22 | 127 | 106 | 40.25 | ||
| Pfam | 23 | 121 | 99 | 6.1E-29 | ||
| ProSiteProfiles | 293 | 354 | 62 | 15.907 | ||
| SMART | 293 | 354 | 62 | 7.3E-17 | ||
| Pfam | 295 | 350 | 56 | 2.0E-16 | ||
| MobiDBLite | 434 | 462 | 29 | - | – | |
| MobiDBLite | 434 | 566 | 133 | - | – | |
| Coils | 441 | 465 | 25 | - | – | |
| MobiDBLite | 468 | 527 | 60 | - | – | |
| MobiDBLite | 528 | 566 | 39 | - | – | |
| Pfam | 574 | 640 | 67 | 2.1E-17 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0415500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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