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IPR018501 is a DDT domain.
<p>The DDT has been named after the better characterised DNA-binding homeobox- containing proteins and the Different Transcription and chromatin remodelling factors in which it is found. It is a domain of about 60 amino acids which is exclusively associated with nuclear domains like AT-Hook, PHD finger, methyl-CpG-binding domain, bromodomain and DNA-binding homeodomain.</p> <p>The DDT domain is characterised by a number of conserved aromatic and charged residues and is predicted to consist of three α helices. A DNA-binding function for the DDT domain has been proposed [[cite:PUB00018298]].</p>
This description is obtained from EB-eye REST.
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | Nucleosome/chromatin assembly factor group [Medicago truncatula] gi|357520229|ref|XP_003630403.1| | 11 | ||
| – | Homeodomain-like transcriptional regulator [Arabidopsis thaliana] gi|334188190|ref|NP_001190470.1| | 18 | ||
| – | Zinc-finger domain of monoamine-oxidase A repressor R1 protein [Arabidopsis thaliana] gi|22327451|ref|NP_198685.2| | 11 | ||
| – | Zinc-finger domain of monoamine-oxidase A repressor R1 protein [Arabidopsis thaliana] gi|22327451|ref|NP_198685.2| | 7 | ||
| – | Zinc-finger domain of monoamine-oxidase A repressor R1 protein [Arabidopsis thaliana] gi|22327451|ref|NP_198685.2| | 7 | ||
| – | Zinc-finger domain of monoamine-oxidase A repressor R1 protein [Arabidopsis thaliana] gi|22327451|ref|NP_198685.2| | 7 | ||
| – | Chromodomain-helicase-DNA-binding protein [Medicago truncatula] gi|357472039|ref|XP_003606304.1| | 22 | ||
| – | Chromodomain-helicase-DNA-binding protein [Medicago truncatula] gi|357472039|ref|XP_003606304.1| | 22 | ||
| – | Chromodomain helicase DNA binding protein [Medicago truncatula] gi|357474041|ref|XP_003607305.1| | 21 | ||
| – | DDT; Homeodomain-related [Medicago truncatula] gi|124360728|gb|ABN08705.1| | 14 | ||
| – | PREDICTED: chromatin modification-related protein EAF7-like [Cicer arietinum] gi|502152172|ref|XP_004508799.1| | 6 | ||
| – | PREDICTED: DDT domain-containing protein DDB_G0282237-like [Cicer arietinum] gi|502139715|ref|XP_004503869.1| | 14 | ||
| – | Homeodomain-like transcriptional regulator isoform 2 [Theobroma cacao] gi|508701749|gb|EOX93645.1| | 12 | ||
| – | PREDICTED: chromatin modification-related protein EAF7-like [Cicer arietinum] gi|502152172|ref|XP_004508799.1| | 4 | ||
| – | PREDICTED: chromatin modification-related protein EAF7-like [Cicer arietinum] gi|502152172|ref|XP_004508799.1| | 5 | ||
| – | DDT; Homeodomain-related [Medicago truncatula] gi|124360728|gb|ABN08705.1| | 15 | ||
| – | DDT domain-containing protein; TAIR: AT1G18950.3 DDT domain superfamily; Swiss-Prot: sp|F4IDY7|DDR4_ARATH DDT domain-containing protein DDR4; TrEMBL-Plants: tr|I1JX04|I1JX04_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0186700 | 7 | ||
| – | Zinc-finger domain of monoamine-oxidase A repressor R1; TAIR: AT5G38690.1 Zinc-finger domain of monoamine-oxidase A repressor R1 protein; Swiss-Prot: sp|Q922M5|CDA7L_MOUSE Cell division cycle-associated 7-like protein; TrEMBL-Plants: tr|A0A072U7K4|A0A072U7K4_MEDTR Zinc-finger of monoamine-oxidase A repressor R1; Found in the gene: LotjaGi1g1v0524300 | 10 | ||
| – | Zinc-finger domain of monoamine-oxidase A repressor R1; TAIR: AT5G38690.1 Zinc-finger domain of monoamine-oxidase A repressor R1 protein; Swiss-Prot: sp|Q922M5|CDA7L_MOUSE Cell division cycle-associated 7-like protein; TrEMBL-Plants: tr|A0A072U7K4|A0A072U7K4_MEDTR Zinc-finger of monoamine-oxidase A repressor R1; Found in the gene: LotjaGi1g1v0524300 | 10 | ||
| – | Zinc-finger domain of monoamine-oxidase A repressor R1; TAIR: AT5G38690.1 Zinc-finger domain of monoamine-oxidase A repressor R1 protein; Swiss-Prot: sp|Q96GN5|CDA7L_HUMAN Cell division cycle-associated 7-like protein; TrEMBL-Plants: tr|A0A072U7K4|A0A072U7K4_MEDTR Zinc-finger of monoamine-oxidase A repressor R1; Found in the gene: LotjaGi1g1v0749700 | 10 | ||
| – | Zinc-finger domain of monoamine-oxidase A repressor R1; TAIR: AT5G38690.1 Zinc-finger domain of monoamine-oxidase A repressor R1 protein; Swiss-Prot: sp|Q96GN5|CDA7L_HUMAN Cell division cycle-associated 7-like protein; TrEMBL-Plants: tr|A0A072U7K4|A0A072U7K4_MEDTR Zinc-finger of monoamine-oxidase A repressor R1; Found in the gene: LotjaGi1g1v0749700 | 10 | ||
| – | Zinc-finger domain of monoamine-oxidase A repressor R1 protein; TAIR: AT5G38690.1 Zinc-finger domain of monoamine-oxidase A repressor R1 protein; Swiss-Prot: sp|Q96GN5|CDA7L_HUMAN Cell division cycle-associated 7-like protein; TrEMBL-Plants: tr|A0A072U7K4|A0A072U7K4_MEDTR Zinc-finger of monoamine-oxidase A repressor R1; Found in the gene: LotjaGi1g1v0749700 | 10 | ||
| – | Zinc-finger domain of monoamine-oxidase A repressor R1 protein; TAIR: AT5G38690.1 Zinc-finger domain of monoamine-oxidase A repressor R1 protein; Swiss-Prot: sp|Q96GN5|CDA7L_HUMAN Cell division cycle-associated 7-like protein; TrEMBL-Plants: tr|A0A072U7K4|A0A072U7K4_MEDTR Zinc-finger of monoamine-oxidase A repressor R1; Found in the gene: LotjaGi2g1v0054100 | 12 | ||
| – | Homeobox protein, putative; TAIR: AT5G44180.1 Homeodomain-like transcriptional regulator; Swiss-Prot: sp|Q9FFH1|RLT2_ARATH Homeobox-DDT domain protein RLT2; TrEMBL-Plants: tr|K7KY04|K7KY04_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0242000 | 22 | ||
| – | Nucleosome-remodeling factor subunit BPTF; TAIR: AT5G22760.1 PHD finger family protein; Swiss-Prot: sp|F4JYC8|PTM_ARATH DDT domain-containing protein PTM; TrEMBL-Plants: tr|A0A1J7GFU1|A0A1J7GFU1_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0481400 | 22 | ||
| – | Nucleosome-remodeling factor subunit; TAIR: AT5G12400.1 PHD-finger and DNA binding domain-containing protein; Swiss-Prot: sp|F4JYC8|PTM_ARATH DDT domain-containing protein PTM; TrEMBL-Plants: tr|A0A0B2PNJ8|A0A0B2PNJ8_GLYSO Nucleosome-remodeling factor subunit NURF301; Found in the gene: LotjaGi3g1v0534700 | 19 | ||
| – | Nucleosome-remodeling factor subunit; TAIR: AT5G12400.1 PHD-finger and DNA binding domain-containing protein; Swiss-Prot: sp|F4JYC8|PTM_ARATH DDT domain-containing protein PTM; TrEMBL-Plants: tr|K7LNU7|K7LNU7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0534700 | 19 | ||
| – | Homeobox protein, putative; TAIR: AT1G28420.1 homeobox-1; Swiss-Prot: sp|F4HY56|RLT1_ARATH Homeobox-DDT domain protein RLT1; TrEMBL-Plants: tr|A0A0B2PKP8|A0A0B2PKP8_GLYSO Homeobox protein 10; Found in the gene: LotjaGi4g1v0061500 | 22 | ||
| – | DDT domain-containing protein; TAIR: AT1G18950.2 DDT domain superfamily; Swiss-Prot: sp|F4IDY7|DDR4_ARATH DDT domain-containing protein DDR4; TrEMBL-Plants: tr|A0A151SAB5|A0A151SAB5_CAJCA Uncharacterized protein; Found in the gene: LotjaGi4g1v0244200 | 8 | ||
| – | DDT domain-containing; TAIR: AT5G08630.1 DDT domain-containing protein; Swiss-Prot: sp|Q9NRL2|BAZ1A_HUMAN Bromodomain adjacent to zinc finger domain protein 1A; TrEMBL-Plants: tr|G7LFT5|G7LFT5_MEDTR Nucleosome/chromatin assembly factor group protein, putative; Found in the gene: LotjaGi4g1v0415500 | 12 | ||
| – | Homeodomain-like transcriptional regulator; TAIR: AT4G12750.1 Homeodomain-like transcriptional regulator; Swiss-Prot: sp|F4JRF5|RLT3_ARATH Homeobox-DDT domain protein RLT3; TrEMBL-Plants: tr|K7KRT9|K7KRT9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0439900 | 12 | ||
| – | Homeobox protein, putative; TAIR: AT1G28420.1 homeobox-1; Swiss-Prot: sp|F4HY56|RLT1_ARATH Homeobox-DDT domain protein RLT1; TrEMBL-Plants: tr|A0A0L9VFB6|A0A0L9VFB6_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0328200 | 22 | ||
| – | Homeobox protein, putative; TAIR: AT1G28420.1 homeobox-1; Swiss-Prot: sp|F4HY56|RLT1_ARATH Homeobox-DDT domain protein RLT1; TrEMBL-Plants: tr|A0A0L9VFB6|A0A0L9VFB6_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0328200 | 22 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| mobidb-lite | MobiDBLite | 1 | 3.03 |