Domain Predictions — View

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SM00571

Source: SMART

Description

No description is available for this domain.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 19

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0050159.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Nucleosome/chromatin assembly factor group [Medicago truncatula] gi\|357520229\|ref\|XP_003630403.1\|	Domains Coil IPR018501 IPR028941 IPR028942 PF02791 PF15612 PF15613 PS50827 PTHR15546 SM00571 mobidb-lite	11
Lj0g3v0211739.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Homeodomain-like transcriptional regulator [Arabidopsis thaliana] gi\|334188190\|ref\|NP_001190470.1\|	Domains Coil G3DSA:1.10.10.60 IPR001356 IPR007759 IPR009057 IPR018501 PF00046 PF02791 PF05066 PS50071 PS50827 PTHR36968 PTHR36968:SF1 SM00389 SM00571 SSF46689 cd00086 mobidb-lite	18
Lj0g3v0251549.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Zinc-finger domain of monoamine-oxidase A repressor R1 protein [Arabidopsis thaliana] gi\|22327451\|ref\|NP_198685.2\|	Domains Coil IPR018501 IPR018866 IPR028942 PF10497 PF15612 PS50827 PTHR31169 PTHR31169:SF1 SM00571 mobidb-lite	11
Lj3g3v1128960.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Chromodomain-helicase-DNA-binding protein [Medicago truncatula] gi\|357472039\|ref\|XP_003606304.1\|	Domains G3DSA:3.30.40.10 IPR001965 IPR011011 IPR013083 IPR018501 IPR019786 IPR019787 IPR028942 PF00628 PF02791 PF15612 PS01359 PS50016 PS50827 PTHR22880 PTHR22880:SF167 SM00249 SM00571 SSF57903 cd15489 cd15532 mobidb-lite	22
Lj3g3v3016640.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Chromodomain-helicase-DNA-binding protein [Medicago truncatula] gi\|357472039\|ref\|XP_003606304.1\|	Domains G3DSA:3.30.40.10 IPR001965 IPR011011 IPR013083 IPR018501 IPR019786 IPR019787 IPR028942 PF00628 PF02791 PF15612 PS01359 PS50016 PS50827 PTHR22880 PTHR22880:SF167 SM00249 SM00571 SSF57903 cd15489 cd15532 mobidb-lite	22
Lj3g3v3579340.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Chromodomain helicase DNA binding protein [Medicago truncatula] gi\|357474041\|ref\|XP_003607305.1\|	Domains G3DSA:3.30.40.10 IPR001965 IPR011011 IPR013083 IPR018501 IPR019786 IPR019787 IPR028942 PF00628 PF02791 PF15612 PS01359 PS50016 PS50827 PTHR22880 PTHR22880:SF5 SM00249 SM00571 SSF57903 cd15539 mobidb-lite	21
Lj4g3v0473640.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	DDT; Homeodomain-related [Medicago truncatula] gi\|124360728\|gb\|ABN08705.1\|	Domains Coil IPR007759 IPR018501 IPR028941 IPR028942 PF02791 PF05066 PF15612 PF15613 PS50827 PTHR36968 PTHR36968:SF1 SM00571 mobidb-lite	14
Lj4g3v2846370.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: DDT domain-containing protein DDB_G0282237-like [Cicer arietinum] gi\|502139715\|ref\|XP_004503869.1\|	Domains Coil IPR013136 IPR018501 IPR028941 IPR028942 PF02791 PF10537 PF15612 PF15613 PS50827 PS51136 PTHR15546 SM00571 mobidb-lite	14
Lj4g3v3015070.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Homeodomain-like transcriptional regulator isoform 2 [Theobroma cacao] gi\|508701749\|gb\|EOX93645.1\|	Domains Coil IPR018501 IPR028941 IPR028942 PF02791 PF15612 PF15613 PS50827 PTHR10390 PTHR10390:SF38 SM00571 mobidb-lite	12
LotjaGi2g1v0054100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Zinc-finger domain of monoamine-oxidase A repressor R1 protein; TAIR: AT5G38690.1 Zinc-finger domain of monoamine-oxidase A repressor R1 protein; Swiss-Prot: sp\|Q96GN5\|CDA7L_HUMAN Cell division cycle-associated 7-like protein; TrEMBL-Plants: tr\|A0A072U7K4\|A0A072U7K4_MEDTR Zinc-finger of monoamine-oxidase A repressor R1; Found in the gene: LotjaGi2g1v0054100	Domains Coil IPR018501 IPR018866 IPR028942 IPR040221 PF10497 PF15612 PS50827 PTHR31169 PTHR31169:SF8 SM00571 mobidb-lite	12
LotjaGi3g1v0242000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Homeobox protein, putative; TAIR: AT5G44180.1 Homeodomain-like transcriptional regulator; Swiss-Prot: sp\|Q9FFH1\|RLT2_ARATH Homeobox-DDT domain protein RLT2; TrEMBL-Plants: tr\|K7KY04\|K7KY04_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0242000	Domains Coil G3DSA:1.10.10.60 IPR001356 IPR007759 IPR009057 IPR018501 IPR028941 IPR028942 PF00046 PF02791 PF05066 PF15612 PF15613 PS50071 PS50827 PTHR36968 PTHR36968:SF5 SM00389 SM00571 SSF46689 cd00086 mobidb-lite	22
LotjaGi3g1v0481400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Nucleosome-remodeling factor subunit BPTF; TAIR: AT5G22760.1 PHD finger family protein; Swiss-Prot: sp\|F4JYC8\|PTM_ARATH DDT domain-containing protein PTM; TrEMBL-Plants: tr\|A0A1J7GFU1\|A0A1J7GFU1_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0481400	Domains G3DSA:3.30.40.10 IPR001965 IPR011011 IPR013083 IPR018501 IPR019786 IPR019787 IPR028942 PF00628 PF02791 PF15612 PS01359 PS50016 PS50827 PTHR46508 PTHR46508:SF10 SM00249 SM00571 SSF57903 cd15489 cd15532 mobidb-lite	22
LotjaGi3g1v0534700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Nucleosome-remodeling factor subunit; TAIR: AT5G12400.1 PHD-finger and DNA binding domain-containing protein; Swiss-Prot: sp\|F4JYC8\|PTM_ARATH DDT domain-containing protein PTM; TrEMBL-Plants: tr\|A0A0B2PNJ8\|A0A0B2PNJ8_GLYSO Nucleosome-remodeling factor subunit NURF301; Found in the gene: LotjaGi3g1v0534700	Domains G3DSA:3.30.40.10 IPR001965 IPR011011 IPR013083 IPR018501 IPR019786 IPR019787 PF00628 PF02791 PS01359 PS50016 PS50827 PTHR46508 PTHR46508:SF5 SM00249 SM00571 SSF57903 cd15539 mobidb-lite	19
LotjaGi3g1v0534700.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Nucleosome-remodeling factor subunit; TAIR: AT5G12400.1 PHD-finger and DNA binding domain-containing protein; Swiss-Prot: sp\|F4JYC8\|PTM_ARATH DDT domain-containing protein PTM; TrEMBL-Plants: tr\|K7LNU7\|K7LNU7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0534700	Domains G3DSA:3.30.40.10 IPR001965 IPR011011 IPR013083 IPR018501 IPR019786 IPR019787 PF00628 PF02791 PS01359 PS50016 PS50827 PTHR46508 PTHR46508:SF5 SM00249 SM00571 SSF57903 cd15539 mobidb-lite	19
LotjaGi4g1v0061500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Homeobox protein, putative; TAIR: AT1G28420.1 homeobox-1; Swiss-Prot: sp\|F4HY56\|RLT1_ARATH Homeobox-DDT domain protein RLT1; TrEMBL-Plants: tr\|A0A0B2PKP8\|A0A0B2PKP8_GLYSO Homeobox protein 10; Found in the gene: LotjaGi4g1v0061500	Domains Coil G3DSA:1.10.10.60 IPR001356 IPR007759 IPR009057 IPR018501 IPR028941 IPR028942 PF00046 PF02791 PF05066 PF15612 PF15613 PS50071 PS50827 PTHR36968 PTHR36968:SF7 SM00389 SM00571 SSF46689 cd00086 mobidb-lite	22
LotjaGi4g1v0415500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	DDT domain-containing; TAIR: AT5G08630.1 DDT domain-containing protein; Swiss-Prot: sp\|Q9NRL2\|BAZ1A_HUMAN Bromodomain adjacent to zinc finger domain protein 1A; TrEMBL-Plants: tr\|G7LFT5\|G7LFT5_MEDTR Nucleosome/chromatin assembly factor group protein, putative; Found in the gene: LotjaGi4g1v0415500	Domains Coil IPR013136 IPR018501 IPR028941 PF02791 PF10537 PF15613 PS50827 PS51136 PTHR15546 SM00571 mobidb-lite	12
LotjaGi4g1v0439900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Homeodomain-like transcriptional regulator; TAIR: AT4G12750.1 Homeodomain-like transcriptional regulator; Swiss-Prot: sp\|F4JRF5\|RLT3_ARATH Homeobox-DDT domain protein RLT3; TrEMBL-Plants: tr\|K7KRT9\|K7KRT9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0439900	Domains Coil IPR018501 IPR028941 IPR028942 PF02791 PF15612 PF15613 PS50827 PTHR10390 PTHR10390:SF44 SM00571 mobidb-lite	12
LotjaGi6g1v0328200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Homeobox protein, putative; TAIR: AT1G28420.1 homeobox-1; Swiss-Prot: sp\|F4HY56\|RLT1_ARATH Homeobox-DDT domain protein RLT1; TrEMBL-Plants: tr\|A0A0L9VFB6\|A0A0L9VFB6_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0328200	Domains Coil G3DSA:1.10.10.60 IPR001356 IPR007759 IPR009057 IPR018501 IPR028941 IPR028942 PF00046 PF02791 PF05066 PF15612 PF15613 PS50071 PS50827 PTHR36968 PTHR36968:SF7 SM00389 SM00571 SSF46689 cd00086 mobidb-lite	22
LotjaGi6g1v0328200.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Homeobox protein, putative; TAIR: AT1G28420.1 homeobox-1; Swiss-Prot: sp\|F4HY56\|RLT1_ARATH Homeobox-DDT domain protein RLT1; TrEMBL-Plants: tr\|A0A0L9VFB6\|A0A0L9VFB6_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0328200	Domains Coil G3DSA:1.10.10.60 IPR001356 IPR007759 IPR009057 IPR018501 IPR028941 IPR028942 PF00046 PF02791 PF05066 PF15612 PF15613 PS50071 PS50827 PTHR36968 PTHR36968:SF7 SM00389 SM00571 SSF46689 cd00086 mobidb-lite	22

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	5.26