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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0425100 |
| Transcript ID | LotjaGi4g1v0425100.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Glutathione S-transferase family protein; TAIR: AT5G41210.1 glutathione S-transferase THETA 1; Swiss-Prot: sp|Q9ZRT5|GSTT1_ARATH Glutathione S-transferase T1; TrEMBL-Plants: tr|I3S7J8|I3S7J8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0425100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:80003371..80005842) extracted from Lotus japonicus Gifu genome v1.2.
ATGAAGCTGAAAGTGTATGCGGACCGCATGTCCCAGCCATCTCGTGCGGTTCTTATCTTCTGCAAGTAACTAATTCTTTC ACTTCGTTTTCTCCTTTTCGAAATTTCAATCTTGTTTACTTATATGCTATTATTATTATTGAAACTGAAATTGAAATCGA CAGAGTCAATGGAATCGATTTTGAGGAGATCAAGATTGAACTATCCAAACGCCAGCACTTATCTCCAGAATTTCATGGTA ATCAATCACTCAGCTTGCACTTTTGAAATGAAATCCTTCCTTCACTCACCCTTGGATTGATTTTAATTATTTTCCTTCAG CTATTAACCCTTTCAAGAAAGTCCCTGCTATTGTTGATGGAAGGTTCAAGCTATTTGAGAGGTTGTTGTTGATGATTACA TATTTATTCTCATTCACTTTGAATTAATTATCCTCTTTCATTTATGTGTTTTTCTTTTTCTTTTTTGCAGTCATGCAATT CTTATCTATCTTGCTTGTGCCTTCCCAGGAGTTGCTGACCATTGGTTAGTATTAGTATTCTCCCTCTTTTTGCAATCTCA TCATCTATGAATTCAATTCAATATATGCCAATCAAGTCAACATAGGCTAGCTAGTAGGGTATTGATTTATGCATGTGTTT CTTACTTTCATTTAGTTACATAGCTTAGGTAAACAGCTTTATTATGCGGCACTTATCACATAGGCACATATTCATAAGCT TATTTGAGAAGCTTATTGAAATAACCTCGAAATAGCTTATAGGTTGATATAAGTACTTATTCATGAGTTAATACAAGAAA CTTGCAAAATAAGCTAAATGACGCTTTTAGGTAGGTATAGGATACTATCATAAGCTAATTCTATATACAAGCTTATCAAG ACACTTCCATTAGTTCCATAATTACTTATGTCATAAGATAAGTTAAAATGATGTTCTTTCAAATATAGCCTAAGGTTCGC ATTCACATATTAGAAACTAGAAAGATCAAACCTGGACAAATGATGCTTCTATCCTAAACTTAAAGGATACACATTCGTCT TGGTGTAAGATTCAGTTCTCTGTATGCTAACACTTTGTTCCTTCCATTCATTCCATTAGGTACCCATCTGATATTTCCAG GAGAGCTAGAATTCAGTCTGTGTTAGATTGGCACCACCTGAATTTGCGCCCCGGAGCAGGTGCATTATAGCAACAAACAA AAAAACCATTTTGTTTATTTGGTTAGGTTTCCGTCATCAAATTTCTTTTTTGTCCTGAAAGTGAAAATAATATGAAAAAT ACCATTATTTCACGAGTCCATATTGTGTTGTTGTGTTTGCTTGCTGGATTGGATAGCTTTATATTATGGGCTTGTATGAA CTTTATATTTCCATTTGCCAAGTAGCAAAGTTCAATCAAGCAAAAGAACAAATAGCTTGAAACTAATAGCTAAGCTTCAG AGAATTTGTTCAAACTGTAAATGATGGTGTGTTGGTGGTTAAGCCTTTCTTTGAGTTCGAGCCTATTGATAGTAATGTCA TTTGCTTAACTTGTTTAATTCTAGTGATGACATGCATTTGAGTTTGGTATACACTTTTCTTGTGCACGTGCATTTTGTTT TCATTCTTTGCATTAATTTGTCTGAAGTATCTTCCTTTGAGATGTGGTGAAGATGCTATTCTTTTGCATGCATATTTCCC CAGCTTCCTCTGTTTTGAATCTTTTGATGACCTAGTCTTTTTGTTATTTTTCTAGCATCATATGTTCTAAATACTGTACT AGCTCCATTATTGGGTCGTCAGCTAAACCAACAAGCAGCTGCTGAAGCTGAGAAAGTTTTGATATCATCCCTGTCAACAA TAGAGAACATTTGGCTTAAGGGGAATGGTCGATACTTGCTTGGTGGCCTCCGACCGTCCATTGCAGACCTGAGCCTGGTT TGTGAGATTATGCAATTGGAGGTAAATGAGGGATTTCCTATAACAAAATAGTTTTCATTATGTCATGACTCGTGGGGGGT GGTTCTTTTTCTCATTAAGATTTTGCTTGTGAGCTTGAAGAAAATAAATTGTACATACCTTTCTTGTTCAGTTTGTGTTT TATGATTGAAAAATCCAGCAACAAACAGGCGTAGTTGGCATGTTATGTTAACTATTTGAAAATTGCTTGGCTAAAGAAAG AACCCATTGATGCTGGTCTAGTTAAAAACTGTTTACCTGGAAATATGATATGCTGGACAGCATACTGATCCAGATTGTGA CTTGTCTTTTTGGATGCAGCTTTTAGACGAGAAGGACCGAGATCGTATTCTTGGTCCGCACAAGAAAGTTCAGCAGTGGA TTGAGAGCACAAAAAATGCAACGAGGCCTCATTTTGACGAAGTTCATAATGTCCTCTATAAGCTCAAAACAAAGCTTTCG GTGCAACAATCTAAGCAGGCAGATAGCGTGATGGAACCTAGGATTAAAACCCCACTAACTTCAAAGTTGTGA
CDS sequence (LotjaGi4g1v0425100.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGCTGAAAGTGTATGCGGACCGCATGTCCCAGCCATCTCGTGCGGTTCTTATCTTCTGCAAAGTCAATGGAATCGA TTTTGAGGAGATCAAGATTGAACTATCCAAACGCCAGCACTTATCTCCAGAATTTCATGCTATTAACCCTTTCAAGAAAG TCCCTGCTATTGTTGATGGAAGGTTCAAGCTATTTGAGAGTCATGCAATTCTTATCTATCTTGCTTGTGCCTTCCCAGGA GTTGCTGACCATTGGTACCCATCTGATATTTCCAGGAGAGCTAGAATTCAGTCTGTGTTAGATTGGCACCACCTGAATTT GCGCCCCGGAGCAGCATCATATGTTCTAAATACTGTACTAGCTCCATTATTGGGTCGTCAGCTAAACCAACAAGCAGCTG CTGAAGCTGAGAAAGTTTTGATATCATCCCTGTCAACAATAGAGAACATTTGGCTTAAGGGGAATGGTCGATACTTGCTT GGTGGCCTCCGACCGTCCATTGCAGACCTGAGCCTGGTTTGTGAGATTATGCAATTGGAGCTTTTAGACGAGAAGGACCG AGATCGTATTCTTGGTCCGCACAAGAAAGTTCAGCAGTGGATTGAGAGCACAAAAAATGCAACGAGGCCTCATTTTGACG AAGTTCATAATGTCCTCTATAAGCTCAAAACAAAGCTTTCGGTGCAACAATCTAAGCAGGCAGATAGCGTGATGGAACCT AGGATTAAAACCCCACTAACTTCAAAGTTGTGA
Protein sequence (LotjaGi4g1v0425100.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKLKVYADRMSQPSRAVLIFCKVNGIDFEEIKIELSKRQHLSPEFHAINPFKKVPAIVDGRFKLFESHAILIYLACAFPG VADHWYPSDISRRARIQSVLDWHHLNLRPGAASYVLNTVLAPLLGRQLNQQAAAEAEKVLISSLSTIENIWLKGNGRYLL GGLRPSIADLSLVCEIMQLELLDEKDRDRILGPHKKVQQWIESTKNATRPHFDEVHNVLYKLKTKLSVQQSKQADSVMEP RIKTPLTSKL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SFLD | 1 | 230 | 230 | 0.0 | – | |
| SUPERFAMILY | 1 | 87 | 87 | 1.08E-22 | ||
| Gene3D | 1 | 80 | 80 | 9.5E-26 | ||
| ProSiteProfiles | 1 | 82 | 82 | 22.575 | ||
| Pfam | 1 | 75 | 75 | 6.9E-15 | ||
| SFLD | 1 | 230 | 230 | 0.0 | – | |
| PANTHER | 1 | 250 | 250 | 1.2E-132 | ||
| CDD | 3 | 78 | 76 | 3.02608E-40 | ||
| Gene3D | 82 | 245 | 164 | 8.9E-46 | – | |
| SUPERFAMILY | 83 | 217 | 135 | 8.07E-20 | ||
| ProSiteProfiles | 89 | 246 | 158 | 12.058 | ||
| CDD | 92 | 222 | 131 | 1.23765E-48 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi4g1v0425100.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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