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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0430500 |
| Transcript ID | LotjaGi4g1v0430500.5 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Serine/threonine-protein phosphatase; TAIR: AT1G64040.1 type one serine/threonine protein phosphatase 3; Swiss-Prot: sp|P48488|PP1_MEDSV Serine/threonine-protein phosphatase PP1; TrEMBL-Plants: tr|I3SEG0|I3SEG0_LOTJA Protein-serine/threonine phosphatase; Found in the gene: LotjaGi4g1v0430500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:80463759..80466567) extracted from Lotus japonicus Gifu genome v1.2.
ATGGACGAGAACGTGCTTGATGAAATCATCCGGAGGCTCGTGGCGGCCAAGAACGGGAGGACCACCAAGCAGGTCAACCT CACGGAGGCGGAAATCCGTCTGCTCTGTGTTTCCGCTAAGGAGATCTTCCTCAGCCAGCCCAATCTCCTCGAGCTTGAAG CTCCTATCAAGATTTGCGGTAAATTTCTTCATCTTCTTTGAATAATTCTGATTATTTGTTGATTTGCGATGTTGAATTGA ATGGAAATCGATGAGAAAATCCACATGCAATTCTGTATGCTTGTTCACACGGAAAAACTTAAAGAAACTTATTAGGGATC CTGGATTTTTGGTTTGTTTAGTGAATGACTAGGTCTTGGTATGAAAATTGTGTGCCTCTTTTGAAACTTGTTTGGTGCCT TGACTTGACTTCAGTGTTGTTGTTAATTACTGATGGCGGAAAGCCAAAATCCCGTCATACGTGACAAATAATGGTGGAAT ATGGCGGCCGTATGGAGGGGTATTGGCCATGGCAGAAAGCTAAAAAACCGCCACGGGAAACTGCTAAGTGGATATTTGAT AACACTGTTTGACTTTGCTCTGGGTTTATAGTTTGGATTGTGTCACCTTTTTGTTTAACCAGACAGGTGGGGGAGAGGAG AGGGATGTGTGATAATGATACTGGATACTGATGGTTCTGAGATAATTGACCAATGCTTGATTATGAGCTCTTCATTTTTG TGGAATTGTGTGTGTAGAAGTCATGTGAATTGATTAACTGTTTGGGTTGTTGTTCAATAGACATAGACGTAATGGCTTGT ATTCTAATAGGCACAATACTACTATATGCAGGAAACTGTTTCCAACATGCTTGTTGTTTGTATTTAGAACTGTCAACACT CAACAGGAACCTGTTTCTGGCTTGACAAAAGAAAGGGGTTAAGAGCTTTTCTGGTGTTTTAGGCAAGCACCCTTAGCGAT TTCATGTTCTGGTTCATGCTAGTTGCATGCTGTGGTGACATTTGCCTTAGTCGCTAATAATTGTAGAATCCTCAAAACCC TGTACTTCTAACTTGGTAACTTTGAAATCGAATTTAGTTTTTAGGGCTTCAGTGGCGGCTGCGGCATTTATAGTTTGTAA AATTCAGAGTTCATTACTTTGGAGCTTCTTCAACTTGTTATCATGCTTTTTCGCTTGAATGTTTTTCAGTTTTATTTAGA TACGAATGTTATGCTTAAGTAGTTGGTTTTTGGAAAATCATGTTAAAATTATTAAACTCTTCAATGTTATCTTCTTTCCC CCTTTTAATATTAATCCCTTGCTTCTGTCAGGTTTGTGATTTTTGTTCCTTTTGCTTTGATGCATTAATAAGGTCTCATT TTGCTTTTTACCACCATGTTATCTGTAATTGTTAAATAGGGGATGACTTATGTTTTAAACAATTCATTTGCAGGTGATGT CCATGGCCAGTTCTCAGATCTTTTAAGGTTGTTTGAATATGGGGGATACCCACCTGAAGCAAATTATTTATTTCTTGGAG ATTATGTTGATCGTGGTAAGCAGAGCATAGAGACAATATGCTTACTCCTATCATACAAGATCAAATATAAGGAGAATTTC TTTCTTCTCAGGGGCAACCATGAATGTGCTTCCATCAATCGTATCTACGGTTTCTATGATGAGTGCAAGAGGAGGTATAA TGTTCGCCTCTGGAAGACTTTTACTGATTGCTTTAATTGTCTACCTGTTGCTGCTCTAATAGATGAGAAGATCCTTTGCA TGCATGGTGGACTATCACCTGAACTAAAAAACTTAGATCAGATAAGGAATATTGCTCGTCCTATTGATGTGCCAGATCAT GGCCTTCTCTGTGACCTTTTATGGGCTGATCCTGATAAAGATATTGACGGATGGGGAGAAAATGATCGAGGTGTTTCTTT TACATTTGGGGCTGATAAGGTTGTTGAATTTCTTGAACATCATGATCTCGATCTGATTTGTAGAGCTCACCAGGTAATGA AATATGAATTTGGTGGTTTATATGATTTAAAAGTTTCCTCTGGATTGCCCATCCATGGCTATTTTGTTCGTAGATAGTAT CGTTTGCTAGTTTGTTTGTACTGCTATACATACTAGAATTGGCCATACATGATAAGCTTGGAATTTATTGATTATTACTC AAATTTTCAAATGAAAAATAATTTCATGCTTTAAGTAGATTTATAATGATGACTGAGAATCAAAGGAAAAAGAGAGAGAT CGGATTGATAAGGATAGGATAAAATTAGGCTGAGTTGTGACTGCTCTATTATGTTTAATGCATATGATGACTGAATACGG TTTTCTGTTTCCTTTCTGTATCACCACCTATGTTGACCCCTCTAAATATATGGTCATTTCTAATCCTGTTTGATTGATGA GCCTTTCTTTAGCTGCCTGTCATTGCTAATGTGCTTGTGTTTAGTATGGTGTCTTCGTCTGTCTATGACTCTATGCTGAA TGCATTGGGCTTTTGCTTGGCTCACAAATATAAATTCTATTTAATCAATTAATGATTCTGGTATGATGTTTTCCATATAA ACTTTTCGGGTGTCACTTTGTCAGGTTGTAGAAGATGGGTATGAGTTTTTTGCTAAACGTCAGCTGGTGACCGTATTCTC CGCACCCAATTACTGTGGTGAATTTGATAATGCTGGTGCTATGATGAGTGTTGATGACACCTTGACATGCTCTTTCCAGA TACTCAAGTCTTCTGAAAAGAAAGGGAAAATGGGATTTGGTAACAACTCATCGAGACCAGGAACTCCACCTCATAAGGTA AAAATATAG
CDS sequence (LotjaGi4g1v0430500.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGACGAGAACGTGCTTGATGAAATCATCCGGAGGCTCGTGGCGGCCAAGAACGGGAGGACCACCAAGCAGGTCAACCT CACGGAGGCGGAAATCCGTCTGCTCTGTGTTTCCGCTAAGGAGATCTTCCTCAGCCAGCCCAATCTCCTCGAGCTTGAAG CTCCTATCAAGATTTGCGGTGATGTCCATGGCCAGTTCTCAGATCTTTTAAGGTTGTTTGAATATGGGGGATACCCACCT GAAGCAAATTATTTATTTCTTGGAGATTATGTTGATCGTGGTAAGCAGAGCATAGAGACAATATGCTTACTCCTATCATA CAAGATCAAATATAAGGAGAATTTCTTTCTTCTCAGGGGCAACCATGAATGTGCTTCCATCAATCGTATCTACGGTTTCT ATGATGAGTGCAAGAGGAGGTATAATGTTCGCCTCTGGAAGACTTTTACTGATTGCTTTAATTGTCTACCTGTTGCTGCT CTAATAGATGAGAAGATCCTTTGCATGCATGGTGGACTATCACCTGAACTAAAAAACTTAGATCAGATAAGGAATATTGC TCGTCCTATTGATGTGCCAGATCATGGCCTTCTCTGTGACCTTTTATGGGCTGATCCTGATAAAGATATTGACGGATGGG GAGAAAATGATCGAGGTGTTTCTTTTACATTTGGGGCTGATAAGGTTGTTGAATTTCTTGAACATCATGATCTCGATCTG ATTTGTAGAGCTCACCAGGTTGTAGAAGATGGGTATGAGTTTTTTGCTAAACGTCAGCTGGTGACCGTATTCTCCGCACC CAATTACTGTGGTGAATTTGATAATGCTGGTGCTATGATGAGTGTTGATGACACCTTGACATGCTCTTTCCAGATACTCA AGTCTTCTGAAAAGAAAGGGAAAATGGGATTTGGTAACAACTCATCGAGACCAGGAACTCCACCTCATAAGGTAAAAATA TAG
Protein sequence (LotjaGi4g1v0430500.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDENVLDEIIRRLVAAKNGRTTKQVNLTEAEIRLLCVSAKEIFLSQPNLLELEAPIKICGDVHGQFSDLLRLFEYGGYPP EANYLFLGDYVDRGKQSIETICLLLSYKIKYKENFFLLRGNHECASINRIYGFYDECKRRYNVRLWKTFTDCFNCLPVAA LIDEKILCMHGGLSPELKNLDQIRNIARPIDVPDHGLLCDLLWADPDKDIDGWGENDRGVSFTFGADKVVEFLEHHDLDL ICRAHQVVEDGYEFFAKRQLVTVFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKSSEKKGKMGFGNNSSRPGTPPHKVKI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 318 | 318 | 2.7E-208 | – | |
| PANTHER | 1 | 318 | 318 | 2.7E-208 | – | |
| Gene3D | 1 | 306 | 306 | 2.5E-138 | ||
| CDD | 5 | 294 | 290 | 0.0 | – | |
| Pfam | 6 | 53 | 48 | 1.5E-19 | ||
| SUPERFAMILY | 22 | 297 | 276 | 1.21E-116 | – | |
| SMART | 27 | 297 | 271 | 3.4E-168 | ||
| PRINTS | 55 | 82 | 28 | 3.4E-96 | ||
| Pfam | 55 | 246 | 192 | 5.3E-38 | ||
| PRINTS | 84 | 111 | 28 | 3.4E-96 | ||
| PRINTS | 117 | 141 | 25 | 3.4E-96 | ||
| ProSitePatterns | 118 | 123 | 6 | - | ||
| PRINTS | 151 | 177 | 27 | 3.4E-96 | ||
| PRINTS | 180 | 207 | 28 | 3.4E-96 | ||
| PRINTS | 237 | 257 | 21 | 3.4E-96 | ||
| PRINTS | 259 | 275 | 17 | 3.4E-96 | ||
| MobiDBLite | 299 | 320 | 22 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. |
Expression pattern of LotjaGi4g1v0430500.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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