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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0437600 |
| Transcript ID | LotjaGi4g1v0437600.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein KINESIN LIGHT CHAIN-RELATED 3; TAIR: AT4G10840.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|O81629|KLCR1_ARATH Protein KINESIN LIGHT CHAIN-RELATED 1; TrEMBL-Plants: tr|A0A1J7H0T0|A0A1J7H0T0_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0437600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:81070052..81072553) extracted from Lotus japonicus Gifu genome v1.2.
ATGCCAGGTCTCGTCAAAACTCCACCGCTCCGAATCACCATGCCCCAAACTCAAACTCCCACCCGAAGATCCGAACCCGC CGCAACCAACAACAAAACTCCCTCCCCGTCGCCCCTCCCGAAGAAGCCACCATCTCCGTCCCCTTCCACCCGCTCCTCCG CCAAGAAGAAGACTCCAGAAACCCCTACCAACCCTGACGCCTCCCTCGACAACCCGGATCTAGGCCCATTCCTCCTCAAA CTAGCCCGCGACACCATCGCCTCCGGCGAAGGCCCCACCAAAGCCCTCGACTACGCCATCCGCGCCTCAAAGTCCTTCGA GATCTGCGCCGCTGACGGCGAGCCCAGCCTCGACCTCGCCATGAGCCTCCACGTCCTCGCCGCCATCTACTGCAGCCTCG GCCGCTTCGAGGAAGCCGTCCCGGTACTCGAGCGCGCGATCCAGGTCCCTGACGTCGCTCGCGGCGCGGATCACGCCCTC GCCGCGTTCTCCGGCCATATGCAGTTAGGCGATACGTTTTCCATGCTCGGACATGTTGATAAATCGATTTCCTGCTACGA CCAGGGTCTTCAGATTCAGATCCAAACGCTTGGTGATACCGATCCACGCGTCGGTGAAACGTGCAGGTACCTCGCGGAGG CGAATGTTCAAGCGATGCAGTTTGACAGAGCGGAGGAGCTTTGCAAGACAACGCTCGAGATCCACCGCGCGCATAGCGAG CCTGCTTCACTGGAAGAAGCTGCGGATCGGAGGCTCATGGCGCTTATCTGCGAGGCGAAAGGAGATTACGAAGCCGCCCT TGAGCACCTCGTGCTGGCGTCCATGGCTATGATCGCGAATGGACAGGACAATGAAGTTGCCTCCATTGATGTTAGCATCG GGAACATGTACATGTCGCTGTGCCGATTCGATGAGGCTATATTTTCCTACCAGAAGGCGCTCACCGTGTTCAAGGCGTCG AAGGGGGAGAATCATCCTTCGGTGGCGTCGGTGTTTGTGCGCCTTGCTGATTTGTACCACAGGACCGGGAAGCTTCGGGA GTCGAAGTCGTACTGTGAGAATGCCATGAGGATATACTCTAAGCCGGTGCCGGGAACCACGCCGGAGGAGATTGCCGGTG GGTTGACTGAGGTTTCCGCGATTTTCGAGTCGGTGGATGAGCCGGAGGAGGCGCTGAAGCTGCTGCAGAGGGCGATGAAG TTGTTGGAGGAGAAACCGGGGCAGCAGAGCACGGTTGCGGGGATAGAAGCCAGGATGGGAGTAATGTATTACATGACTGG GAGGTATGAGGATGCGAGGAGCAGTTTTGAGAGTGCGGTGGCGAAACTGAGAGCGAGTGGGGAGAGGAAATCTGCGTTTT TCGGAGTTGTGTTGAACCAGATGGGGTTGGCATGTGTGCAGCTGTTCAAGATAGATGAGGCTGCTGAGTTGTTTGAGGAA GCTAGGACGATTCTTGAGCAGGAGTGTGGCCCTTGTCATCAAGATACTCTTGGAGTGTACAGCAACCTTGCAGCAACTTA TGATGCCATGGGAAGGTAAAAATCTTATGACCCTTCTTCCTCATTAGGGTGTTTTTGTTATTTAGCATATCAAGTTACTT TTCTTGCCCTGATTTGTTTCAACATGTTGTTGGAAGTATTGCCTTTTAAAGCAGCCATGAAGTAGAAATGAGTTAATGGA TTTAGCATTGCAAGAGACTTGCAATTTAGTGATGTTTGGATTACAGTTTGTGATTCATTGTTTGATTTAGACCATGTCAT GAAACTCAAAATGATGTTCAAATATAAGTCATGTTGTTTGTAGATTAAACTTAGCTTTCACACCCCAACTTGGAGTTTGA GATGTGGGAACTATATATAATAATCCAAACATGCTCCAAGTGACTGACTGGAAAAGAAGTGTACTTGTTACTACTGTAGT TATGTGTTGGCCTGCATGATTGCAGGGTTTTTGTCTATACCTGTGTTGAGTTCAACAACCTTTGGTTATAAATCCCGTAC CCCATGCTTTGTGAATTGATGCTGTATATTTGTGCTTCACACCACGAGTATAGTACTTTAATGCTTCCATTAGTGGTAGT GGAATTATCTGGTATTCTCATGTTTTATCCTTAGATTCTCTTCATGAGGATGGATTCGTAGTTATTCTCCTGATATGTTG TTTGTCCCATGACACTTGTATGTCTGAGCAAGATTCTAGATTCTTTATGTTTGATGTTGAATTTGAGGTCTTTAGCTCTA AACCTGATATGATGGCATACTTTTCAGAGTGGGAGATGCAATTGAAATCTTAGAATATGTCCTTAAGTTGAGGGAAGAAA AGCTTGGAATAGCAAATCCTGATTTTGAAGATGAGAAGCGTCGGCTGGCTGAGCTCCTGAAAGAAGCAGGCAAGACGCGA GACAGGAAAGCGAAATCTCTCGAAAACCTCATTGATCCCAACTCAAAGAGGACAAAGAAGGAGGGGAATAAGAGGTGGCC TGGTTTGGGGTTTAGAATTTAA
CDS sequence (LotjaGi4g1v0437600.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCAGGTCTCGTCAAAACTCCACCGCTCCGAATCACCATGCCCCAAACTCAAACTCCCACCCGAAGATCCGAACCCGC CGCAACCAACAACAAAACTCCCTCCCCGTCGCCCCTCCCGAAGAAGCCACCATCTCCGTCCCCTTCCACCCGCTCCTCCG CCAAGAAGAAGACTCCAGAAACCCCTACCAACCCTGACGCCTCCCTCGACAACCCGGATCTAGGCCCATTCCTCCTCAAA CTAGCCCGCGACACCATCGCCTCCGGCGAAGGCCCCACCAAAGCCCTCGACTACGCCATCCGCGCCTCAAAGTCCTTCGA GATCTGCGCCGCTGACGGCGAGCCCAGCCTCGACCTCGCCATGAGCCTCCACGTCCTCGCCGCCATCTACTGCAGCCTCG GCCGCTTCGAGGAAGCCGTCCCGGTACTCGAGCGCGCGATCCAGGTCCCTGACGTCGCTCGCGGCGCGGATCACGCCCTC GCCGCGTTCTCCGGCCATATGCAGTTAGGCGATACGTTTTCCATGCTCGGACATGTTGATAAATCGATTTCCTGCTACGA CCAGGGTCTTCAGATTCAGATCCAAACGCTTGGTGATACCGATCCACGCGTCGGTGAAACGTGCAGGTACCTCGCGGAGG CGAATGTTCAAGCGATGCAGTTTGACAGAGCGGAGGAGCTTTGCAAGACAACGCTCGAGATCCACCGCGCGCATAGCGAG CCTGCTTCACTGGAAGAAGCTGCGGATCGGAGGCTCATGGCGCTTATCTGCGAGGCGAAAGGAGATTACGAAGCCGCCCT TGAGCACCTCGTGCTGGCGTCCATGGCTATGATCGCGAATGGACAGGACAATGAAGTTGCCTCCATTGATGTTAGCATCG GGAACATGTACATGTCGCTGTGCCGATTCGATGAGGCTATATTTTCCTACCAGAAGGCGCTCACCGTGTTCAAGGCGTCG AAGGGGGAGAATCATCCTTCGGTGGCGTCGGTGTTTGTGCGCCTTGCTGATTTGTACCACAGGACCGGGAAGCTTCGGGA GTCGAAGTCGTACTGTGAGAATGCCATGAGGATATACTCTAAGCCGGTGCCGGGAACCACGCCGGAGGAGATTGCCGGTG GGTTGACTGAGGTTTCCGCGATTTTCGAGTCGGTGGATGAGCCGGAGGAGGCGCTGAAGCTGCTGCAGAGGGCGATGAAG TTGTTGGAGGAGAAACCGGGGCAGCAGAGCACGGTTGCGGGGATAGAAGCCAGGATGGGAGTAATGTATTACATGACTGG GAGGTATGAGGATGCGAGGAGCAGTTTTGAGAGTGCGGTGGCGAAACTGAGAGCGAGTGGGGAGAGGAAATCTGCGTTTT TCGGAGTTGTGTTGAACCAGATGGGGTTGGCATGTGTGCAGCTGTTCAAGATAGATGAGGCTGCTGAGTTGTTTGAGGAA GCTAGGACGATTCTTGAGCAGGAGTGTGGCCCTTGTCATCAAGATACTCTTGGAGTGTACAGCAACCTTGCAGCAACTTA TGATGCCATGGGAAGAGTGGGAGATGCAATTGAAATCTTAGAATATGTCCTTAAGTTGAGGGAAGAAAAGCTTGGAATAG CAAATCCTGATTTTGAAGATGAGAAGCGTCGGCTGGCTGAGCTCCTGAAAGAAGCAGGCAAGACGCGAGACAGGAAAGCG AAATCTCTCGAAAACCTCATTGATCCCAACTCAAAGAGGACAAAGAAGGAGGGGAATAAGAGGTGGCCTGGTTTGGGGTT TAGAATTTAA
Protein sequence (LotjaGi4g1v0437600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPGLVKTPPLRITMPQTQTPTRRSEPAATNNKTPSPSPLPKKPPSPSPSTRSSAKKKTPETPTNPDASLDNPDLGPFLLK LARDTIASGEGPTKALDYAIRASKSFEICAADGEPSLDLAMSLHVLAAIYCSLGRFEEAVPVLERAIQVPDVARGADHAL AAFSGHMQLGDTFSMLGHVDKSISCYDQGLQIQIQTLGDTDPRVGETCRYLAEANVQAMQFDRAEELCKTTLEIHRAHSE PASLEEAADRRLMALICEAKGDYEAALEHLVLASMAMIANGQDNEVASIDVSIGNMYMSLCRFDEAIFSYQKALTVFKAS KGENHPSVASVFVRLADLYHRTGKLRESKSYCENAMRIYSKPVPGTTPEEIAGGLTEVSAIFESVDEPEEALKLLQRAMK LLEEKPGQQSTVAGIEARMGVMYYMTGRYEDARSSFESAVAKLRASGERKSAFFGVVLNQMGLACVQLFKIDEAAELFEE ARTILEQECGPCHQDTLGVYSNLAATYDAMGRVGDAIEILEYVLKLREEKLGIANPDFEDEKRRLAELLKEAGKTRDRKA KSLENLIDPNSKRTKKEGNKRWPGLGFRI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 74 | 74 | - | – | |
| MobiDBLite | 11 | 35 | 25 | - | – | |
| PANTHER | 21 | 588 | 568 | 0.0 | – | |
| PANTHER | 21 | 588 | 568 | 0.0 | – | |
| MobiDBLite | 48 | 68 | 21 | - | – | |
| Gene3D | 88 | 286 | 199 | 2.4E-24 | ||
| ProSiteProfiles | 120 | 196 | 77 | 9.328 | ||
| ProSiteProfiles | 120 | 153 | 34 | 7.493 | ||
| SMART | 120 | 153 | 34 | 18.0 | ||
| SUPERFAMILY | 123 | 533 | 411 | 1.85E-19 | ||
| Pfam | 124 | 272 | 149 | 2.4E-9 | ||
| ProSiteProfiles | 163 | 196 | 34 | 6.372 | ||
| SMART | 163 | 196 | 34 | 18.0 | ||
| SMART | 205 | 238 | 34 | 31.0 | ||
| SMART | 247 | 280 | 34 | 330.0 | ||
| Pfam | 286 | 360 | 75 | 1.1E-11 | – | |
| ProSiteProfiles | 287 | 530 | 244 | 17.48 | ||
| ProSiteProfiles | 287 | 320 | 34 | 8.349 | ||
| SMART | 287 | 320 | 34 | 0.43 | ||
| Gene3D | 287 | 452 | 166 | 2.3E-26 | ||
| SMART | 329 | 362 | 34 | 1.5 | ||
| ProSiteProfiles | 329 | 362 | 34 | 6.343 | ||
| ProSiteProfiles | 372 | 405 | 34 | 7.139 | ||
| SMART | 372 | 405 | 34 | 150.0 | ||
| Coils | 385 | 405 | 21 | - | – | |
| ProSiteProfiles | 413 | 446 | 34 | 7.257 | ||
| SMART | 413 | 446 | 34 | 18.0 | ||
| Gene3D | 453 | 574 | 122 | 3.4E-18 | ||
| ProSiteProfiles | 455 | 488 | 34 | 6.284 | ||
| SMART | 455 | 488 | 34 | 12.0 | ||
| Pfam | 457 | 529 | 73 | 2.0E-9 | – | |
| SMART | 497 | 530 | 34 | 2.5 | ||
| ProSiteProfiles | 497 | 530 | 34 | 7.641 | ||
| Coils | 538 | 558 | 21 | - | – | |
| MobiDBLite | 554 | 589 | 36 | - | – | |
| MobiDBLite | 554 | 583 | 30 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi4g1v0437600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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