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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0437600 |
| Transcript ID | LotjaGi4g1v0437600.3 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein KINESIN LIGHT CHAIN-RELATED 3; TAIR: AT4G10840.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|O81629|KLCR1_ARATH Protein KINESIN LIGHT CHAIN-RELATED 1; TrEMBL-Plants: tr|A0A1J7H0T0|A0A1J7H0T0_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0437600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:81070052..81072658) extracted from Lotus japonicus Gifu genome v1.2.
CAGAGTGGTACCCAGTTCTTATCACACCCTTGTTCCTCTTACAATATATTCAATTCTCTCACATCATCTTCTTCCCAATC CAATCCTCTATCTCTCTCTTCCACCATGCCAGGTCTCGTCAAAACTCCACCGCTCCGAATCACCATGCCCCAAACTCAAA CTCCCACCCGAAGATCCGAACCCGCCGCAACCAACAACAAAACTCCCTCCCCGTCGCCCCTCCCGAAGAAGCCACCATCT CCGTCCCCTTCCACCCGCTCCTCCGCCAAGAAGAAGACTCCAGAAACCCCTACCAACCCTGACGCCTCCCTCGACAACCC GGATCTAGGCCCATTCCTCCTCAAACTAGCCCGCGACACCATCGCCTCCGGCGAAGGCCCCACCAAAGCCCTCGACTACG CCATCCGCGCCTCAAAGTCCTTCGAGATCTGCGCCGCTGACGGCGAGCCCAGCCTCGACCTCGCCATGAGCCTCCACGTC CTCGCCGCCATCTACTGCAGCCTCGGCCGCTTCGAGGAAGCCGTCCCGGTACTCGAGCGCGCGATCCAGGTCCCTGACGT CGCTCGCGGCGCGGATCACGCCCTCGCCGCGTTCTCCGGCCATATGCAGTTAGGCGATACGTTTTCCATGCTCGGACATG TTGATAAATCGATTTCCTGCTACGACCAGGGTCTTCAGATTCAGATCCAAACGCTTGGTGATACCGATCCACGCGTCGGT GAAACGTGCAGGTACCTCGCGGAGGCGAATGTTCAAGCGATGCAGTTTGACAGAGCGGAGGAGCTTTGCAAGACAACGCT CGAGATCCACCGCGCGCATAGCGAGCCTGCTTCACTGGAAGAAGCTGCGGATCGGAGGCTCATGGCGCTTATCTGCGAGG CGAAAGGAGATTACGAAGCCGCCCTTGAGCACCTCGTGCTGGCGTCCATGGCTATGATCGCGAATGGACAGGACAATGAA GTTGCCTCCATTGATGTTAGCATCGGGAACATGTACATGTCGCTGTGCCGATTCGATGAGGCTATATTTTCCTACCAGAA GGCGCTCACCGTGTTCAAGGCGTCGAAGGGGGAGAATCATCCTTCGGTGGCGTCGGTGTTTGTGCGCCTTGCTGATTTGT ACCACAGGACCGGGAAGCTTCGGGAGTCGAAGTCGTACTGTGAGAATGCCATGAGGATATACTCTAAGCCGGTGCCGGGA ACCACGCCGGAGGAGATTGCCGGTGGGTTGACTGAGGTTTCCGCGATTTTCGAGTCGGTGGATGAGCCGGAGGAGGCGCT GAAGCTGCTGCAGAGGGCGATGAAGTTGTTGGAGGAGAAACCGGGGCAGCAGAGCACGGTTGCGGGGATAGAAGCCAGGA TGGGAGTAATGTATTACATGACTGGGAGGTATGAGGATGCGAGGAGCAGTTTTGAGAGTGCGGTGGCGAAACTGAGAGCG AGTGGGGAGAGGAAATCTGCGTTTTTCGGAGTTGTGTTGAACCAGATGGGGTTGGCATGTGTGCAGCTGTTCAAGATAGA TGAGGCTGCTGAGTTGTTTGAGGAAGCTAGGACGATTCTTGAGCAGGAGTGTGGCCCTTGTCATCAAGATACTCTTGGAG TGTACAGCAACCTTGCAGCAACTTATGATGCCATGGGAAGGTAAAAATCTTATGACCCTTCTTCCTCATTAGGGTGTTTT TGTTATTTAGCATATCAAGTTACTTTTCTTGCCCTGATTTGTTTCAACATGTTGTTGGAAGTATTGCCTTTTAAAGCAGC CATGAAGTAGAAATGAGTTAATGGATTTAGCATTGCAAGAGACTTGCAATTTAGTGATGTTTGGATTACAGTTTGTGATT CATTGTTTGATTTAGACCATGTCATGAAACTCAAAATGATGTTCAAATATAAGTCATGTTGTTTGTAGATTAAACTTAGC TTTCACACCCCAACTTGGAGTTTGAGATGTGGGAACTATATATAATAATCCAAACATGCTCCAAGTGACTGACTGGAAAA GAAGTGTACTTGTTACTACTGTAGTTATGTGTTGGCCTGCATGATTGCAGGGTTTTTGTCTATACCTGTGTTGAGTTCAA CAACCTTTGGTTATAAATCCCGTACCCCATGCTTTGTGAATTGATGCTGTATATTTGTGCTTCACACCACGAGTATAGTA CTTTAATGCTTCCATTAGTGGTAGTGGAATTATCTGGTATTCTCATGTTTTATCCTTAGATTCTCTTCATGAGGATGGAT TCGTAGTTATTCTCCTGATATGTTGTTTGTCCCATGACACTTGTATGTCTGAGCAAGATTCTAGATTCTTTATGTTTGAT GTTGAATTTGAGGTCTTTAGCTCTAAACCTGATATGATGGCATACTTTTCAGAGTGGGAGATGCAATTGAAATCTTAGAA TATGTCCTTAAGTTGAGGGAAGAAAAGCTTGGAATAGCAAATCCTGATTTTGAAGATGAGAAGCGTCGGCTGGCTGAGCT CCTGAAAGAAGCAGGCAAGACGCGAGACAGGAAAGCGAAATCTCTCGAAAACCTCATTGATCCCAACTCAAAGAGGACAA AGAAGGAGGGGAATAAGAGGTGGCCTGGTTTGGGGTTTAGAATTTAA
CDS sequence (LotjaGi4g1v0437600.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCCCAAACTCAAACTCCCACCCGAAGATCCGAACCCGCCGCAACCAACAACAAAACTCCCTCCCCGTCGCCCCTCCC GAAGAAGCCACCATCTCCGTCCCCTTCCACCCGCTCCTCCGCCAAGAAGAAGACTCCAGAAACCCCTACCAACCCTGACG CCTCCCTCGACAACCCGGATCTAGGCCCATTCCTCCTCAAACTAGCCCGCGACACCATCGCCTCCGGCGAAGGCCCCACC AAAGCCCTCGACTACGCCATCCGCGCCTCAAAGTCCTTCGAGATCTGCGCCGCTGACGGCGAGCCCAGCCTCGACCTCGC CATGAGCCTCCACGTCCTCGCCGCCATCTACTGCAGCCTCGGCCGCTTCGAGGAAGCCGTCCCGGTACTCGAGCGCGCGA TCCAGGTCCCTGACGTCGCTCGCGGCGCGGATCACGCCCTCGCCGCGTTCTCCGGCCATATGCAGTTAGGCGATACGTTT TCCATGCTCGGACATGTTGATAAATCGATTTCCTGCTACGACCAGGGTCTTCAGATTCAGATCCAAACGCTTGGTGATAC CGATCCACGCGTCGGTGAAACGTGCAGGTACCTCGCGGAGGCGAATGTTCAAGCGATGCAGTTTGACAGAGCGGAGGAGC TTTGCAAGACAACGCTCGAGATCCACCGCGCGCATAGCGAGCCTGCTTCACTGGAAGAAGCTGCGGATCGGAGGCTCATG GCGCTTATCTGCGAGGCGAAAGGAGATTACGAAGCCGCCCTTGAGCACCTCGTGCTGGCGTCCATGGCTATGATCGCGAA TGGACAGGACAATGAAGTTGCCTCCATTGATGTTAGCATCGGGAACATGTACATGTCGCTGTGCCGATTCGATGAGGCTA TATTTTCCTACCAGAAGGCGCTCACCGTGTTCAAGGCGTCGAAGGGGGAGAATCATCCTTCGGTGGCGTCGGTGTTTGTG CGCCTTGCTGATTTGTACCACAGGACCGGGAAGCTTCGGGAGTCGAAGTCGTACTGTGAGAATGCCATGAGGATATACTC TAAGCCGGTGCCGGGAACCACGCCGGAGGAGATTGCCGGTGGGTTGACTGAGGTTTCCGCGATTTTCGAGTCGGTGGATG AGCCGGAGGAGGCGCTGAAGCTGCTGCAGAGGGCGATGAAGTTGTTGGAGGAGAAACCGGGGCAGCAGAGCACGGTTGCG GGGATAGAAGCCAGGATGGGAGTAATGTATTACATGACTGGGAGGTATGAGGATGCGAGGAGCAGTTTTGAGAGTGCGGT GGCGAAACTGAGAGCGAGTGGGGAGAGGAAATCTGCGTTTTTCGGAGTTGTGTTGAACCAGATGGGGTTGGCATGTGTGC AGCTGTTCAAGATAGATGAGGCTGCTGAGTTGTTTGAGGAAGCTAGGACGATTCTTGAGCAGGAGTGTGGCCCTTGTCAT CAAGATACTCTTGGAGTGTACAGCAACCTTGCAGCAACTTATGATGCCATGGGAAGAGTGGGAGATGCAATTGAAATCTT AGAATATGTCCTTAAGTTGAGGGAAGAAAAGCTTGGAATAGCAAATCCTGATTTTGAAGATGAGAAGCGTCGGCTGGCTG AGCTCCTGAAAGAAGCAGGCAAGACGCGAGACAGGAAAGCGAAATCTCTCGAAAACCTCATTGATCCCAACTCAAAGAGG ACAAAGAAGGAGGGGAATAAGAGGTGGCCTGGTTTGGGGTTTAGAATTTAA
Protein sequence (LotjaGi4g1v0437600.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPQTQTPTRRSEPAATNNKTPSPSPLPKKPPSPSPSTRSSAKKKTPETPTNPDASLDNPDLGPFLLKLARDTIASGEGPT KALDYAIRASKSFEICAADGEPSLDLAMSLHVLAAIYCSLGRFEEAVPVLERAIQVPDVARGADHALAAFSGHMQLGDTF SMLGHVDKSISCYDQGLQIQIQTLGDTDPRVGETCRYLAEANVQAMQFDRAEELCKTTLEIHRAHSEPASLEEAADRRLM ALICEAKGDYEAALEHLVLASMAMIANGQDNEVASIDVSIGNMYMSLCRFDEAIFSYQKALTVFKASKGENHPSVASVFV RLADLYHRTGKLRESKSYCENAMRIYSKPVPGTTPEEIAGGLTEVSAIFESVDEPEEALKLLQRAMKLLEEKPGQQSTVA GIEARMGVMYYMTGRYEDARSSFESAVAKLRASGERKSAFFGVVLNQMGLACVQLFKIDEAAELFEEARTILEQECGPCH QDTLGVYSNLAATYDAMGRVGDAIEILEYVLKLREEKLGIANPDFEDEKRRLAELLKEAGKTRDRKAKSLENLIDPNSKR TKKEGNKRWPGLGFRI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 61 | 61 | - | – | |
| MobiDBLite | 1 | 22 | 22 | - | – | |
| PANTHER | 13 | 575 | 563 | 0.0 | – | |
| PANTHER | 13 | 575 | 563 | 0.0 | – | |
| MobiDBLite | 35 | 55 | 21 | - | – | |
| Gene3D | 75 | 273 | 199 | 2.0E-24 | ||
| ProSiteProfiles | 107 | 140 | 34 | 7.493 | ||
| ProSiteProfiles | 107 | 183 | 77 | 9.328 | ||
| SMART | 107 | 140 | 34 | 18.0 | ||
| SUPERFAMILY | 109 | 514 | 406 | 2.28E-19 | ||
| Pfam | 111 | 260 | 150 | 2.0E-9 | ||
| ProSiteProfiles | 150 | 183 | 34 | 6.372 | ||
| SMART | 150 | 183 | 34 | 18.0 | ||
| SMART | 192 | 225 | 34 | 31.0 | ||
| SMART | 234 | 267 | 34 | 330.0 | ||
| SUPERFAMILY | 270 | 391 | 122 | 2.89E-15 | ||
| Pfam | 273 | 347 | 75 | 1.1E-11 | – | |
| ProSiteProfiles | 274 | 307 | 34 | 8.349 | ||
| SMART | 274 | 307 | 34 | 0.43 | ||
| Gene3D | 274 | 440 | 167 | 2.2E-26 | ||
| ProSiteProfiles | 274 | 517 | 244 | 17.48 | ||
| ProSiteProfiles | 316 | 349 | 34 | 6.343 | ||
| SMART | 316 | 349 | 34 | 1.5 | ||
| ProSiteProfiles | 359 | 392 | 34 | 7.139 | ||
| SMART | 359 | 392 | 34 | 150.0 | ||
| Coils | 372 | 392 | 21 | - | – | |
| SMART | 400 | 433 | 34 | 18.0 | ||
| ProSiteProfiles | 400 | 433 | 34 | 7.257 | ||
| Gene3D | 441 | 562 | 122 | 3.5E-18 | ||
| SMART | 442 | 475 | 34 | 12.0 | ||
| ProSiteProfiles | 442 | 475 | 34 | 6.284 | ||
| Pfam | 444 | 516 | 73 | 2.0E-9 | – | |
| SMART | 484 | 517 | 34 | 2.5 | ||
| ProSiteProfiles | 484 | 517 | 34 | 7.641 | ||
| Coils | 525 | 545 | 21 | - | – | |
| MobiDBLite | 541 | 576 | 36 | - | – | |
| MobiDBLite | 541 | 570 | 30 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi4g1v0437600.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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