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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0439500 |
| Transcript ID | LotjaGi4g1v0439500.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Kinase; TAIR: AT2G24370.1 kinase with adenine nucleotide alpha hydrolases-like domain-containing protein; Swiss-Prot: sp|Q9FKG6|PUB52_ARATH U-box domain-containing protein 52; TrEMBL-Plants: tr|I1K653|I1K653_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0439500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:81321677..81327626) extracted from Lotus japonicus Gifu genome v1.2.
CCTAAATCCACCATTTTGTTACCTCATATGTGGGAGGAACAGAACAAACAAAACATATAAAACAGACAAACCTAGGCTGC CAAGACCGGCAGCGTTAGGACTTTGTCTGATTTATTTTTTAGAATCTAAAAACTCTTTTCAGAAATAATTTTTGAAACTT GTTTTTCTAAAAAAGAAAAGAAAAACTTTGCTGAAGAAAGAATCGGTGATTTGAAAACTAAAATCAGCGATTGCTTGCCG GTAAAGTGATTTCGAGGTAATTGAATTCTCTAACAAGAATCCTTTGAGAAAGTGAAGAAGATGTCAAGGGCCATAGACAA GAAGCTTGGTGCAGGACGTGTGGTGGCTGTAGCCATTGAGAACAACAAAACAAGCCAATATGCCGTCAAATGGGCTGTTG ACAATATTCTTCCCAAGGAACAACATCTCTTATTAGTCCATGTTAGACAAAGAGCTTCTTCCATTCCTACACCAAGTAAT TCTTATTGCTCCATGCATATACATATTGCTTGAATCTATATGTAACATTTCTATTTCATGTTACAATCCCATAATATAGG AATATTGTATATTACAGAGTATTGATACAACTTTGCCAAAATGTTGGGATTGATATACGAGGAAATTTAGGCCTGCAATT TGCGTAAATATTTTAGAATTCTGAGCTGACGAATATAAAAACTAACAAAACCCAAGAAAGATTTAATGTCATAACATTGT TGGGGTTTGGCGGAAAACACAAGTTTTTTAATGGCTAAATCTCCATTTGATGGAAAACATGGAGATGTTGTGCTATCAGT TCTTGCATTTCATTTCGTGAAATCCAGCTTTTTTTTTTAGAGATAACATGAGATATTTGAGGAATATTTGTAGCAGGTGA GAATCGCGTTTGTACTATTGTCATGTATGTATTCAATTCTTTGTATATATGCATACCAGAAATTTTTGTTCAATGTTGTT TCAATCTTTGTAACACAATCATGCACACATTGATGACTTGAATAATTATGAATGCAGCTGGAAACAATATATCCCTTGAT GGCAATGATGATGTGGCTAGAGCATACAAGCAACAAATGGACAATGAATCCAGGGAGCTTTTTGCTTCATTCCGTGTCTT CTGCAATAGAAAGAGTGTATGTTCTAATACATTATGTGATCCATCTTTCAATAATGAAATTAAAGAGAAAAGCAGAAAGA CGAGAATGGAAAACATTGAAGAGAAAAATGAACAATCAAATTTAACAATGATTTTTCTTTGTCTACAACAGATACTATGC AAAGAAGTGTTGTTGGATGACACAGATATAGCTAAGGCAATAATTGAAGGCATTTCATCCTATTCCATAGAGCTTCTGAT ACTTGGGGCCCCATCAAGGAGTGGTCTTGTAAGGTAATTGTTCCTTCCTAGTCCTAGCTCTCACTCTCCAAACACCGGCC CTAGCAATATGCTTCATAGTGCACAATCAAGTCAGCAATAACAATTGCTACTTATCAATATAAGACGATCATGAGTTAGC AAATAATGATGAATAAAAAAAAATGAATGGTACAAATTACTTCTACAAAAGCTAGTACAAGTTAAATTTTAAAACTTCGA CCGACCCTACGACCCGTTTGTAACAACTTTGGTAGTTCATGTTTGAAAATCTTTCTATAATTGATTTTAAAGTCAAAGTC GATTTTAGAAAGAAGCTTTTGTGATTAGCTTCTAGTTGCTAGAATTGATTATGGGAATACGTAAGTTGATCCAAGCATGC ACGCAGAAGCATTTACATAGTAAAACATGAATAGATACTCTTGAACTATATTTTGTTCTGTTAGAAGGAAACATAATCCT AGTTCTAATGCACTGTTCATGGCAGAAGATTTAGGACATCGGATGTTCCAGGTGTCGTGTCAAGAGGGGCACCGCCATTC TGCACTGTGTACATTATTTCCAAAGGAAAGATCTCATCAGTGAAAACTGCTACTTCTGCACTACCTGCTAAACCTACACC AAAATTGCAGCCTCAGCCTGTCCTGAGTAATGAGAAAATGGAGGCACAGCTAATTCGCAGCCATCCACCACGACGTATGC CAATTTCTCTTTGATCTCTGTCCCATATAGGATAATCTAGTTGTAAGAGAAACTAAATAGTTTCTCGTATCAGGAAATAT ATGTGATAGGAGTAACATATAGTTTCTCTTATATTCATATTCTCTTATATATCTCATCTCATATCTAATCTGGCTTCTGT CATTCTTCATAACAATTTTCTTGTTTTGGTAATGTTGCTCATAAAGCACTATTTGTTTGTAATATCTATTACAGCATCAG CTGAGAAGCCAGCATACCTTTCTCGCCAGATTCAGGATGAAGATGAAATGAGGTAAGCACCTCATAGATCCTTAGTTTGA GTTATATAAAGTTAATGTAAACAATGATAGCATTATCCTATGACATGTTAACTATGTAACAAAAAGTCAAAAACCACTCA AGCTAAAATGCCATCATTTCCAAGCATATGACATACAAATGCTAATTAGAAATGTACATGAGACATGGTGATGGATGGCT TACTGAGAGGACTAATAGCATGTTTGGATTAGTTTCTCTTTTCTCATAATCAATCTTGACATACAGAAGAAGCTACTCAT AGAAGCTCTTCCCCGAGACTGATTTCGGCTTTAGAATAAATTATAGACAGATTTTCAAACATGCACTAACTTGATATTCT ATGGACAGGTCACCTTTCACAAGAGTTGGAAAACCAGGCCACAGATCCTACGAGTCCTCAATCCCTGACTCTGACATTTC ATTCGTGAGCAGTGGAAGGCCAAGTATTGATAGGATGTTCCCTATGGTATACGATGAAATGGACTCAACCCCTCGGTTTT CGTCAGGATCAGATAATGATGTTAGAAGTTTCGGTTCATCTTTCTCAGGTGCTAAGTCAATTGATCAGGGTGACTACTCA TTCTGCTCACAAGACAGTGGGACATCAATGTCGTCAGCACCAAGGTTTTCAAGTGGGGTAAGCACAATCTAGGATAAATT ATAACTATATATGTATTCAACATGGCGAACAAATGTACCTTATTAGTATGACTAAGAACCTGGCTTTCCAAAAAAAAGCA TGACTAAGAACCCATGATTGGAGCTGCTTGTGTGCCTTCCTAACTGTGTTAGGAACTTAGGATCAAAGGGCCTATCTGAT TGTTGTTTTGTGAAGCAGTATAGTTTTAAAATCAGAAAAAGAAAAAACTTCTTTGATTTAATGAATATGTTTTGAAACAA TAGGATGATGTGGAAGCTGAAATGAGGAGACTGAGGTTAGAACTGAAGCAAACAATGGAAATGTACAGCACAGCTTGCAA AGAAGCTCTGACAGCAAATCAAAAGGTACTTTACAATCTAGTCCAAACATACAAGTTCTGAAAATACTAGACAGGGTCAG GGCAAACTTGAACTTGTTAATGCAACTTACAACACATATAACTAATTAACTATGATAGCATGTTTGGATCAACTTCTCTT TTATCAGAATCAACTCTGAAATCCAGAAGCCACTCACAGAAGCTTCTGACCAGAATTGGCTTCTAATCAGAGTTGATTCA GAATCAATTGTAGAAGAGTTACCAAACACGTTGTAACTCATCAAAATAGGGATTGCCATTTTCATTTGAAGAAAGAAAGT GATAACTGACAATTGGCACTTCTCTTCTACAGGCATTGGAACTTCAGCGTTGGAAAATGGATGAACAAAGGAAATTGGAA GCGGCGCGATTGGCTGAAGAAACAGCACTGGCAATAGCTGAGAAGGAGAAATTAAAATGTCAAGCAGCCATGGAGGCAGC AGAAGCAAGCCGGAAAATCGCAGAGTTGGAAGCACAAAAAAGAATGAACGCAGAAATGAAAAGCATGACAGAATCTGAGC AGAAGAACAGGCCAGGAGACAGTATTTCATATGGAGCCAGGTACAGAAGATACACTATTGAGGAAATAGAAGAAGCCACA AACTTCTTTGCAGGCAATCTCAAGATCGGTGAAGGGGGCTATGGACCAGTCTACAAGGCTGAACTAGATCACACGCAGGT TGCAATCAAAGTGCTAAAACCAGATGCATCTCAAGGACGGTCACAGTTTCAGCAAGAGGTATGGAAAATAGCAATAAAAA CTTGCGCATGAAATGTATCCAAGAAAACACAGAATTTGCATGATCCTAAGTAACTGCATAAAGTAAAATCATTAAGAGCA TATTTGGTTCAATGTTCACGAGTGTTAGAATTAATTCTCCTCTATCAGAATCAAGTTTTGAGTGTTTGGATGTTTCCTTT CAATTCTAGCTTTAATATTAACTCTTGGATGAAGTTACAAATTTTAGCTTCTATAGTTTACATAATCAATTATGAGATTC ACAAAACTAGATTTAACACTACCCTACAGAAATCACTTTTTTCATACATGTATCCAAGCATACATTACTTCAATTTCAAC TTACTTTTACCTTAATCAATTCTACCAAAATCAATTCTACCGACAATCGATTTTGACAGTGCTGATCCAAACAGGCACCC TATTAAGGTAAACAATGGACTATGATTAGACATTGCTGAATCAATCAATTTGGCGTTTAATTCGTGCAGGTTGAAGTGCT AAGTTCAATAAGGCATCCCAACATGGTTCTCCTCCTTGGAGCATGCCCGGAGTACGGTTGTCTAGTGTACGAGTACATGG CGAATGGAAGCTTGGACGATTGCCTCTGCAGGAGAAGCAAAAACTCACCAGTTCTTCCCTGGCAGCTAAGATTCAGAATT GCAGCAGAGATAGCCACTGGCCTCCTTTTCCTCCACCAGGCAAAACCAGAACCGCTGGTGCACCGCGACTTAAAACCAGG AAACATTTTGCTTGACCGAAACTTTGTGAGCAAGATCAGTGATGTGGGGCTGGCTAGGCTTGTCCCTCCTTCAGTTGCAG ACACCGTGACACAGTACCGCATGACAGCAACTGCCGGAACATTCTGCTACATCGATCCTGAGTACCAGCAAACAGGCATG CTTGGAATCAAGTCTGATATCTACTCACTTGGGATCATGCTTCTGCAGATGGTAACAGCAAAGCCTCCAATGGGTTTGAC TCACCATGTTGGAAGAGCTATTGAGAGAGGGACATTTGCTGAGATGCTTGACCCTGCTGTTGAGGACTGGCCAGTTGAAC ATGCCTTGCATTTTGCAAAGATAGCACTGCAGTGTGCTGAGATGAGAAGAAAAGATAGGCCTGATCTTGGAAAAGTTGTG TTACCTGAGCTCAACAAGCTCAGAAACTTCGCTGAAGATAACATGCCTATGATGATGATGATGTTTGGTGGTAAAGCAGG ATTTACTCCTAGAAGTAACAACAATTTTTCACGCTCTACATTTTCTTCCTCAGCCTCAGCTCAGGTGAGTCAGTGTGACT GATTACCACACCTTGCTATTTTTTGGTATAATCATTGCATGCAAATAACACATCACATTACATGTTTCCTTTTCTATAGG ACTCTATGACTATGAGTGAATCAAACTCCTTATCTGGAATGTCTGGATATGAAAGTCGCTCAAGCACATCATCAATCACG AAAATGTAAACTCTGAAGTTCATAGTTTAACGCCGTGATGCATAAAATGGGTGCAAGTTAACAAGAGGAGGCATGCAGCA TGAAAGCTGGTTTAACAACAGCATGATGACAATGCAACAAGCATCCACTTCAAAGTCAAGTTTTAGGTTAATCTGTCTAT AACAGGCATAAATTCAAGAAGTAGAATGTATCCAGACAAAACTGTAACTGTTCAAGTTATTTGCTTAAAGAATCACAAAG TATCCATGGTTGAACTTCGTGTTTTTCTTTTTCTGCAGAACGAACGATCGAGTCATATATTAAATTTATATTCCTTAAAT TACATTTGCAAACACAAACGAGTAATCAAG
CDS sequence (LotjaGi4g1v0439500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCAAGGGCCATAGACAAGAAGCTTGGTGCAGGACGTGTGGTGGCTGTAGCCATTGAGAACAACAAAACAAGCCAATA TGCCGTCAAATGGGCTGTTGACAATATTCTTCCCAAGGAACAACATCTCTTATTAGTCCATGTTAGACAAAGAGCTTCTT CCATTCCTACACCAACTGGAAACAATATATCCCTTGATGGCAATGATGATGTGGCTAGAGCATACAAGCAACAAATGGAC AATGAATCCAGGGAGCTTTTTGCTTCATTCCGTGTCTTCTGCAATAGAAAGAGTATACTATGCAAAGAAGTGTTGTTGGA TGACACAGATATAGCTAAGGCAATAATTGAAGGCATTTCATCCTATTCCATAGAGCTTCTGATACTTGGGGCCCCATCAA GGAGTGGTCTTGTAAGAAGATTTAGGACATCGGATGTTCCAGGTGTCGTGTCAAGAGGGGCACCGCCATTCTGCACTGTG TACATTATTTCCAAAGGAAAGATCTCATCAGTGAAAACTGCTACTTCTGCACTACCTGCTAAACCTACACCAAAATTGCA GCCTCAGCCTGTCCTGAGTAATGAGAAAATGGAGGCACAGCTAATTCGCAGCCATCCACCACGACCATCAGCTGAGAAGC CAGCATACCTTTCTCGCCAGATTCAGGATGAAGATGAAATGAGGTCACCTTTCACAAGAGTTGGAAAACCAGGCCACAGA TCCTACGAGTCCTCAATCCCTGACTCTGACATTTCATTCGTGAGCAGTGGAAGGCCAAGTATTGATAGGATGTTCCCTAT GGTATACGATGAAATGGACTCAACCCCTCGGTTTTCGTCAGGATCAGATAATGATGTTAGAAGTTTCGGTTCATCTTTCT CAGGTGCTAAGTCAATTGATCAGGGTGACTACTCATTCTGCTCACAAGACAGTGGGACATCAATGTCGTCAGCACCAAGG TTTTCAAGTGGGGATGATGTGGAAGCTGAAATGAGGAGACTGAGGTTAGAACTGAAGCAAACAATGGAAATGTACAGCAC AGCTTGCAAAGAAGCTCTGACAGCAAATCAAAAGGCATTGGAACTTCAGCGTTGGAAAATGGATGAACAAAGGAAATTGG AAGCGGCGCGATTGGCTGAAGAAACAGCACTGGCAATAGCTGAGAAGGAGAAATTAAAATGTCAAGCAGCCATGGAGGCA GCAGAAGCAAGCCGGAAAATCGCAGAGTTGGAAGCACAAAAAAGAATGAACGCAGAAATGAAAAGCATGACAGAATCTGA GCAGAAGAACAGGCCAGGAGACAGTATTTCATATGGAGCCAGGTACAGAAGATACACTATTGAGGAAATAGAAGAAGCCA CAAACTTCTTTGCAGGCAATCTCAAGATCGGTGAAGGGGGCTATGGACCAGTCTACAAGGCTGAACTAGATCACACGCAG GTTGCAATCAAAGTGCTAAAACCAGATGCATCTCAAGGACGGTCACAGTTTCAGCAAGAGGTTGAAGTGCTAAGTTCAAT AAGGCATCCCAACATGGTTCTCCTCCTTGGAGCATGCCCGGAGTACGGTTGTCTAGTGTACGAGTACATGGCGAATGGAA GCTTGGACGATTGCCTCTGCAGGAGAAGCAAAAACTCACCAGTTCTTCCCTGGCAGCTAAGATTCAGAATTGCAGCAGAG ATAGCCACTGGCCTCCTTTTCCTCCACCAGGCAAAACCAGAACCGCTGGTGCACCGCGACTTAAAACCAGGAAACATTTT GCTTGACCGAAACTTTGTGAGCAAGATCAGTGATGTGGGGCTGGCTAGGCTTGTCCCTCCTTCAGTTGCAGACACCGTGA CACAGTACCGCATGACAGCAACTGCCGGAACATTCTGCTACATCGATCCTGAGTACCAGCAAACAGGCATGCTTGGAATC AAGTCTGATATCTACTCACTTGGGATCATGCTTCTGCAGATGGTAACAGCAAAGCCTCCAATGGGTTTGACTCACCATGT TGGAAGAGCTATTGAGAGAGGGACATTTGCTGAGATGCTTGACCCTGCTGTTGAGGACTGGCCAGTTGAACATGCCTTGC ATTTTGCAAAGATAGCACTGCAGTGTGCTGAGATGAGAAGAAAAGATAGGCCTGATCTTGGAAAAGTTGTGTTACCTGAG CTCAACAAGCTCAGAAACTTCGCTGAAGATAACATGCCTATGATGATGATGATGTTTGGTGGTAAAGCAGGATTTACTCC TAGAAGTAACAACAATTTTTCACGCTCTACATTTTCTTCCTCAGCCTCAGCTCAGGACTCTATGACTATGAGTGAATCAA ACTCCTTATCTGGAATGTCTGGATATGAAAGTCGCTCAAGCACATCATCAATCACGAAAATGTAA
Protein sequence (LotjaGi4g1v0439500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSRAIDKKLGAGRVVAVAIENNKTSQYAVKWAVDNILPKEQHLLLVHVRQRASSIPTPTGNNISLDGNDDVARAYKQQMD NESRELFASFRVFCNRKSILCKEVLLDDTDIAKAIIEGISSYSIELLILGAPSRSGLVRRFRTSDVPGVVSRGAPPFCTV YIISKGKISSVKTATSALPAKPTPKLQPQPVLSNEKMEAQLIRSHPPRPSAEKPAYLSRQIQDEDEMRSPFTRVGKPGHR SYESSIPDSDISFVSSGRPSIDRMFPMVYDEMDSTPRFSSGSDNDVRSFGSSFSGAKSIDQGDYSFCSQDSGTSMSSAPR FSSGDDVEAEMRRLRLELKQTMEMYSTACKEALTANQKALELQRWKMDEQRKLEAARLAEETALAIAEKEKLKCQAAMEA AEASRKIAELEAQKRMNAEMKSMTESEQKNRPGDSISYGARYRRYTIEEIEEATNFFAGNLKIGEGGYGPVYKAELDHTQ VAIKVLKPDASQGRSQFQQEVEVLSSIRHPNMVLLLGACPEYGCLVYEYMANGSLDDCLCRRSKNSPVLPWQLRFRIAAE IATGLLFLHQAKPEPLVHRDLKPGNILLDRNFVSKISDVGLARLVPPSVADTVTQYRMTATAGTFCYIDPEYQQTGMLGI KSDIYSLGIMLLQMVTAKPPMGLTHHVGRAIERGTFAEMLDPAVEDWPVEHALHFAKIALQCAEMRRKDRPDLGKVVLPE LNKLRNFAEDNMPMMMMMFGGKAGFTPRSNNNFSRSTFSSSASAQDSMTMSESNSLSGMSGYESRSSTSSITKM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 5 | 794 | 790 | 0.0 | – | |
| PANTHER | 5 | 794 | 790 | 0.0 | – | |
| Gene3D | 13 | 164 | 152 | 2.5E-11 | ||
| Pfam | 13 | 144 | 132 | 1.2E-6 | ||
| CDD | 14 | 166 | 153 | 1.15633E-54 | – | |
| SUPERFAMILY | 15 | 152 | 138 | 2.85E-10 | – | |
| MobiDBLite | 229 | 257 | 29 | - | – | |
| Coils | 324 | 344 | 21 | - | – | |
| Coils | 384 | 404 | 21 | - | – | |
| Gene3D | 406 | 529 | 124 | 2.0E-25 | – | |
| SUPERFAMILY | 434 | 717 | 284 | 1.32E-67 | ||
| ProSiteProfiles | 457 | 721 | 265 | 35.835 | ||
| SMART | 457 | 718 | 262 | 8.6E-27 | ||
| Pfam | 462 | 711 | 250 | 1.5E-39 | ||
| Gene3D | 530 | 737 | 208 | 7.2E-48 | – | |
| ProSitePatterns | 576 | 588 | 13 | - | ||
| MobiDBLite | 755 | 794 | 40 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi4g1v0439500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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