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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0441200 |
| Transcript ID | LotjaGi4g1v0441200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Inorganic pyrophosphatase 2; TAIR: AT1G17710.1 Pyridoxal phosphate phosphatase-related protein; Swiss-Prot: sp|Q9FZ62|PPSP2_ARATH Inorganic pyrophosphatase 2; TrEMBL-Plants: tr|G7LJK6|G7LJK6_MEDTR 2,3-diketo-5-methylthio-1-phosphopentane phosphatase; Found in the gene: LotjaGi4g1v0441200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:81489973..81493571) extracted from Lotus japonicus Gifu genome v1.2.
CTCACATCCAACATAAGAGAACAATTGAATAAATGGGAGTTTTTTTAAAAGAATATATGGGAGTTTAAAAAAAAATCCAA ATGAGAGGTTATGGTATAAATAAAGTGAGTGAAAATATAATGCCTATTGGCTATTACTATTATACAAACCCGGTGGCTGA GCTGGTGGCGAGTGGCGAAGATGGCGACGGCGACGGTGGTGATTTTCGACTTTGATCGGACCATAATCGACGATGATAGT GACTCATGGATCATCGCCGAAATGGGTCTCACCCCCATTTTCAGCCAACTTAGCTCCACCATGCCCTGGACCCCTCTCAT GGTAATGGTACCTTCTCATCTTCTCCCTCTCAACGAATTCGAATTGTTTTGACTCTGAATTTTCACTCTCCAACGTGTTT GATCGTACAGAACAGAATGATGGAGGAGCTTCACTCGCAAGGGTTCACCACCGGCGACATTGCTCAGTGCCTGAAACGGG CTTTATTGCATCCAAACATCGTTTCAGCGATCAAATCTGCACACGCTCTTGGGTAATTGTGATTGATTCTTTCTACATTC CCTTCAATCATTTGCTGTATTTCGTTTTGAATTGGCCTGAACGTTGTTGCATTTGCAGGTGTGAGTTGAGGATAATTAGT GACGCAAATGCGTTCTACATTGATACCATTCTGGAACACCATGGTTTATCTGGGTGCTTTTCAGAGATCAACACAAACCC ATCTTTTGTTGATGAAGAGGGTCGCCTTCGGATCGCGCCATTTCATGATACAGCGTTGGATCCTCATGATTGTCCCCTCT GCCCTCCCAATATGTGCAAGGTATAACAGATTAGATATTACTTCCATTTCCATAATTCTGTAACTAAATTTTGGGGTTAG TGTGGTGTATTTCATATTTGAATGCATTAGCTGAAGCAGTTTTACCAATATAGTTGATAATCTAGAGTAAATTTGAAAAT CTAGTAGGATTCTACCTCTAGGGAATAAAATGTTTTAAAATGACAAAGTGAATCTTTGGAAATCTTTCATTCTAAAGGCA AAATCAATTTTTTGTGAGAAGCTTCTTGGTGTCATAATTGGTTTTGAAAGAAAGAGAAGTTAATCCAAATATACTATAGA AGTGAATCTAAATATGCTGTTAGTTCAGGAATATATATATTAGAATATTAGTTTATCAAAGTTTCTTCTTTTGATCCAGT GAGTAAAGCATCATTCATCTATTTGTGACTTGAAACAGTGTGTTGTGTTCACCTGATTTGTCTGTCACTATGTTAATTTA GGATTTGTTAGTTGTTGCATTGCATACATATGAACTTGTGGAAAGTGTAGGTGTGGTTTCTGCTTAGCCCTCTTACAAAT TCTGTTGTTTTCATGTCATCCTTCCATGCTCTCTTTCTTTGCTTTTGGCTCTTGTGTTGCGGTAATTTGTTCCTCATATG TGTTGGTTCTGTTGTTCTTTTCCATCTTAGGGTTTAGTGATTGACCGAATCCGGGGTTCTTTACCTGAAAACAAAAGATT CATCTACATTGGAGATGGAGCAGGTGATTATTGCCCGACTTTGAAGCTGGGGAGAGGTGAGTTTGTGATGCCGAGGAAGA ATTATCCCCTCTGGAACCGGATATGCAGTGACCCAAAACTAGTTGAAGCAGAAGTTCATGATTGGAGCAGTGGGGAGGAG TTGGAGAGCATACTACTGAAGCTGATCAACAAATTAGTTACATAAGCTCAGTCTATACTAACATAGAAATATAGGATTCA TCATTATTTGTGGTATTATTTGTGGAAGTCGATTGAACATGCGTTGTTTTTTCATATAGCTTGCTCTGATTTTTAAACTA TAGAAATGCTTAATAGAATTGGAGGCCAAGATAGATGATTCTATTGGATTATTTACAGATACATATACAAGGGAGTAAGT TTCGATAGAGCCATGCAACTAACCAGTAACTGACTCAACTAAAGAGTAACTAATCTTAACTAACTTTATCACATTCAGCT TATTTTTGTGTATTAACTCCCGGGCTGGAGAAAGGATGTCACACATTTTCAAGTTGGAGATGATGCTGCAAATTGAAGGA AGAGGCAGAGGCTTAGTAAAAATGGTTGCAGAGTTGTCAAGCAATGGAAGTAATAAGTAAGAGAATGTTTAAGTTTCTCT TGGAAATGTTACAATCCAACAAAATGTGCTTTGGGCACATGTGATAAGCCGGGTGGTGGGTGTTATGAATGGTGGGACAA GTGGCTTGATTGGAACTTGGAGTCATGCAGCAAGTAAGTGATTCATTGGACTTCAAATACTGTGGCAGCTGATGCTTGGT ACTCGGATTCAGGTAAGGAGCTAGTTGTAAGTTGTTAGTTGTTTGCTTTTTTGATTTCCAAGAAATGAGAGACAAACCAA GATAGATGAAGCAAGTTGTGACTGATCGTGTGTCTACGCAATCAAACTAGTTAGATTCATTGAAAGTTGTCAAGGTCAAT GATGATTCAGATGTGAAAAAGGCCTTCACCAGGAGAGAACTTGATGTAATATTATAGTACTTTATGATCAGCTTGCTCAT GAACACCAAACACATTTAGCTAGTGAATAATGAACACAATTTCTGGCCGAGCGATAACTGGCAATATGAGGATAAGTCAT GGGGGTTCTATGATCTTTGCTGAGATTGAGAGAACCATCCATAGGGGTCTGATCAGGAACAATAGCTCCAGGGCATACTT ACACTGGTTGAGAACAATGCCTTTGAAGGATTGAGGCAGTTCTAAACTGGGGAAAAATTTGACTTCCCAGTTGTCCTTTA TTTGAAATTGAGCATGGAGATACTGTTTCACTAATTGAATTTCTGAGAGGTCATTGCCTGCTAATAATACATCATCAACA TAGATCAATGAAACAGTGAATGTGGATGCCTTGTGTAATTTAAGAATGTGACTGACTGAACTTTGAGTGTAATAAGTGAT TGAAGGGCACTGGGGACTGTTAAACCATTGCTGAGGCCATATTGTGAATGTAAACCATTTCTCCGTTCAATTTTTATTTG TTTCCTGAATGTAAACGATTAATCTTTTCTATAAATTCAGATAAAAATAAAGCAAAGCCGTCTCGTAGATGACTAACTGG CACAAGAATATTAGAAAATGGCCATATCACGAGACATATGGACACTGAACCCCTACGTTTTGAGTTAGATTAATATTATT TATTTCATATTTTTCTTGTTTGAATGGGAAGAATAACAATTGACACTGTTCAAGTGTTCAGTGTTCAGTAATTAATAAAC TGACTGAGTAGTACTCCCTCCGGTCCTATTTATAAGCAACAACAAAAAAATTCACATAGTTTAAGAAATGTAGTTAAACT AGATAAAATGCATTAAATTTGTCTTAAATTAAAATGAACTTCTAAAATTACCCTTTGTTATTAGTGTTGGAAAGTGGAAA AGAGAGAGAATAATTAATGAGACACATTTTACAAGTTAGAATTAATAAGGACATCATTGGAAAAAATTAATTAATATAGC TCAAACTTTCATTTGGTTCTTATAAAAAGGACCAAGATTTTTCTTCTCTTTCATGCTTATAAATAGGACCGGAAGGAGT
CDS sequence (LotjaGi4g1v0441200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGACGGCGACGGTGGTGATTTTCGACTTTGATCGGACCATAATCGACGATGATAGTGACTCATGGATCATCGCCGA AATGGGTCTCACCCCCATTTTCAGCCAACTTAGCTCCACCATGCCCTGGACCCCTCTCATGAACAGAATGATGGAGGAGC TTCACTCGCAAGGGTTCACCACCGGCGACATTGCTCAGTGCCTGAAACGGGCTTTATTGCATCCAAACATCGTTTCAGCG ATCAAATCTGCACACGCTCTTGGGTGTGAGTTGAGGATAATTAGTGACGCAAATGCGTTCTACATTGATACCATTCTGGA ACACCATGGTTTATCTGGGTGCTTTTCAGAGATCAACACAAACCCATCTTTTGTTGATGAAGAGGGTCGCCTTCGGATCG CGCCATTTCATGATACAGCGTTGGATCCTCATGATTGTCCCCTCTGCCCTCCCAATATGTGCAAGGGTTTAGTGATTGAC CGAATCCGGGGTTCTTTACCTGAAAACAAAAGATTCATCTACATTGGAGATGGAGCAGGTGATTATTGCCCGACTTTGAA GCTGGGGAGAGGTGAGTTTGTGATGCCGAGGAAGAATTATCCCCTCTGGAACCGGATATGCAGTGACCCAAAACTAGTTG AAGCAGAAGTTCATGATTGGAGCAGTGGGGAGGAGTTGGAGAGCATACTACTGAAGCTGATCAACAAATTAGTTACATAA
Protein sequence (LotjaGi4g1v0441200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MATATVVIFDFDRTIIDDDSDSWIIAEMGLTPIFSQLSSTMPWTPLMNRMMEELHSQGFTTGDIAQCLKRALLHPNIVSA IKSAHALGCELRIISDANAFYIDTILEHHGLSGCFSEINTNPSFVDEEGRLRIAPFHDTALDPHDCPLCPPNMCKGLVID RIRGSLPENKRFIYIGDGAGDYCPTLKLGRGEFVMPRKNYPLWNRICSDPKLVEAEVHDWSSGEELESILLKLINKLVT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PIRSF | 1 | 238 | 238 | 2.3E-87 | ||
| Gene3D | 1 | 191 | 191 | 4.4E-21 | ||
| PANTHER | 4 | 237 | 234 | 8.5E-123 | – | |
| PANTHER | 4 | 237 | 234 | 8.5E-123 | ||
| Pfam | 5 | 234 | 230 | 3.5E-88 | ||
| SUPERFAMILY | 5 | 191 | 187 | 2.85E-24 | ||
| TIGRFAM | 6 | 186 | 181 | 2.8E-30 | – | |
| TIGRFAM | 6 | 198 | 193 | 5.4E-56 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Phosphatase activity | Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate. |
Expression pattern of LotjaGi4g1v0441200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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