Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0451100 |
| Transcript ID | LotjaGi4g1v0451100.1 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 3-hydroxyisobutyryl-CoA hydrolase-like protein; TAIR: AT4G13360.1 ATP-dependent caseinolytic (Clp) protease/crotonase family protein; Swiss-Prot: sp|Q9T0K7|HIBC6_ARATH 3-hydroxyisobutyryl-CoA hydrolase-like protein 3, mitochondrial; TrEMBL-Plants: tr|I1K5T3|I1K5T3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0451100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:82318250..82324718) extracted from Lotus japonicus Gifu genome v1.2.
AAAAGAAATTGGGTGGTAATTTGCAGTTTAGTAATTGAAGTAAATAGGCAGGAAAATGGAGGGGCTAAAATGTCACAACA ATATTAAGTAGGTACTGTGTGTGTGGGTTAACATGGCATGCTGGTTGTGATTCAGTGACAGAAGAGAATAGAATGCGTGT AGGAGGAACTAATCGAATTCTGAGCTTACTCACTTTCTCTCTCACCAAACCTTCTTCTTCTTCTTCTTCTTCCTCCATCA CTTTCCGATCATTCTCCGCCATGGCCGCCGAAGATGATTTCGTCAAGGGCACTGTTCATTCCAACGGCGTCGCTGTCATC ACGCTCGATCGCCCCAAAGCTCTCAACGCCATGAACCTAGGTTTTTTCCTCATCCCTCTAATTATTATGCATGCTGTGTT GTGTGTTCTCTCTAGAACAATTGCTCGAGCTTCTCGATTACTTGGAAATTGCTGTTTCAGATTAGTGTCATTAGGTCCAG TACAATTTAGGTCAATTTTCATTCAATTTGATGGGAATCAATGATGATCATAGAAATTGATTGTTGAGAAAACTAGGGTT TCTGGTGATGTATATGTTGTAAATTAGTTCATTTTTTTGAAATAGTTTTGAGTTAATTATGTAGGATTTGAAGGGGGGAA ATGAGGATTTCTCTGTGTAAGTAGTTACCTTACCTCCTGTTGATTTTGACTTGACAATCTTAATGGTGCAGATATGGATG TAAAGTATAAAAGTTATCTTGATCAATGGGAATTGGACCCGAGGGTCAAATGTGTGCTGGTTGACAGCAGCTCGCCTCGC GCCTTTTGTGCTGGTATGGTTTTTGAGAGTCGTCGTTGTGAGAAATAATGCGTAGTTCGTCTATCTTTTAATGCAACATT TTATGGAAAGCATGCTTCTAGCTTGGATAGATTATGAATTAACTTCTTTTGCAGATGTTCTGTTTTAGATTTGAGATTAT TTTGGTTTAGAGTGCTGGGTAAGGTTTTGAGAGTCACCTCTGATGGTCAATGCAGGTATGGATATTAAAGGGGTTGTTGC TGAAATACAAAAGGACAAAAGCACACCTTTAGTGCAGAAGGTCTCATTATATTATTTGTTTTCAACCTCAAGTGTATTAA TGCAATGCATGCATGTCCAGTTGCAGTTTTGATGTGCTTCATTGGATATATAGTTTGCTTTTCTGTCAACATCAACATCT TCTTTGGATGCTACACTGCCTGCTGTTTTATAGTTTATGTTTTGTTAAATAATTTTTTTCTCTATCCCCAAATCTTCTTT CTTGGTGACCGAGATCTTAGTTTATCTGCAGGCGGTGATGTGAAGCAGATAATAACCAAGAACCACCTGTCAGATATGAT TGAGGTCTAGTTGTGTCCTTTGAAATTAAATGCTATCAGACTCATACCCCCTTTGCTTTATTAAAACCATGCCAATACTA GATGAATATATTTTTTGTTGGAATATTTTGCATTTATAAACTATAATCTCTTTACTTAATCACTAGTATGTTTGGATATG CAATAGAACAACCCAAACATGATTTTGGAAGCATTTAATGTGATTTTACACGAAAATTATGTCTTTTCTAAAACCAAAAC TAAGTTGTCTTGAAAGCATGGTTGTGTTGAAATGTAAAGATGATACTTTTACGTTGAGTTTAGATTTTTGTACTAATTTA TATTTCTAGCTTACTTTTAAGATAAAAGCTTCCAAACACATTATATCACTTGAAACTTAATTCCAGTCAAAATCAACTTG TAAAATCAAGATCAACAATCAAGTTGTCAAACACTCATCCATGTCAAATTTTGCTCGTGTCAGCATTGATGGCTTTTAAA AACTTCGACATTTTAAAATGATTTGTAATATCTAGTTATTGAGGAAGTTTCATACTAACGTTAATCCAAAATGAAGTGTA TAAGATATGCAACTCTTACTCTATGATTGAAGAAGTCATCACTGCGACATTGTTTTTGTTAAGCCACAAGGTAATCCCAC ACCCAAAGATGTGTGGGACTAATAACTGCTTGGGTGTTGGTTTTCCCTTGGCCACAAGGTGTTTCAAGTGGAGGTCCTAC TAATTCCCCATATGTTGCAAATGTACTAGTTTCTTTCATTTCAAGACCACCATTTTGACAGTCTTTTGCCCCTCGATGTT GAATTTCTTTTGGGTGTTTTATTGTTTGTACTGCTAGAATTACATCTGTAGTGTTAGAAATGTAATATAATATAAAATAA TTCATGTTTTCACTCAAAACTTACAGTTTTGAGATAGTTGGTTCTTAACATGGTATCAGAGTGGTCTAGAGTTCGATCAT TGTTGCCATAATTATTTATAGTAAAAAAGTTAAATTTAGCACAAGGTAGGGGAGCTTGTGCATTATCCATGCTTCAAGCC CAACAAGCTCTTGCGTAATGGGGAATGTTAGAAATAGAATATAAAATCATCCAGTGTCTTCACTCAACTGGTTAAGATTT TGGGATGTTGGTTCATGAATTACCGTTTGGCTGACCTTAGACAGGTTCTTTTCTCAGTTAGGTTTTAGAATTACCTGCTG AGTGATCTCATATAGAAAAATACCACTCAAACTTAAAGGAAATTTTATTGCATATAACCTGCAATGTCATATGTGACTAA ATGCTGAGTTGTTAAGAGCCAATGAGAAAGTAAACTAAGTGTTGTAAGGATGAGAATATTTTGACTTATGCTGGATGAGA GGTTAAATAAGATGAAATTGAATTAGGAATACAATTATTAGAGACAAAATTAGAGTAGCTCCTGTTGTAGGAAAGATGGT AAACATGTAAAGTATCTTCGTTAGTGGTAAGGTATGTGGGAAAGCACTGGCTAGGATGGTTGATCAAATGGAAGATAGTC CAATAATTAGTAGAGGGAGACCAGGGAAAACTGTAAGTCAAACAATTAAGAGAGATTTATTGGTAAACTGTCTATGTTTA AACTTAACACATAGCATTATGGGATTGCATGGCTCTTGTAACGGACTCCACCTTGTTTAAAATGTCCATGTGTGTTGCTG GTTTCATACTGATTGCTGTCAGAACTATGTTGGATTGTGTGTTTTGCTGCATTTTATATTTTTGCATTAGTTGCTTGTAC TGTGTTGAAATAATATATCTATTATGCTGCATATTTTAGGTCTTCACGGCTGAGTATTCTTTGATATGCAAAATTGCTGA GTACAAGAAGCCATATATAAGCTTCATGGATGGAATTACAATGGGTTTTGGAATTGGCTTATCTGGTCATGGCCGCTATC GTATCATAACAGAGGTAAGCTCAACATGTAATTAGTTGCCTCGTTTTATTATATATATTTAATGAACTCATAAATAGCCA TTCTAGATCTTGTTTATGACTTTCTTTTACTTTAACATATTTCCAGAGAACTGTTCTTGCAATGCCCGAAAATGGAATTG GCTTGTTCCCAGATGTAGGTTTTGCTTATATCGCGGCTCAAAGTCCAGGAGAAGGATCTGTTGGTATTTTTCTTAATATA ACACAGCGTGTGTAGTTTTTATTGCTTTTATTAGACGTGCTGATAAGGATTTAAGGGTTTTTAAAGTACAAACCCTTCAT GTTCTTCTTTTTGTGCATTATTCTGTCATAATTTGCCTGATGAATACATGTGTGCTGCACTACTGAAGCATCTAGATGTG GTCTCAGCTCCTGTTACACAGCTTATTAATTTTCTTAAATATGGTTTGAAGGTTCTTCGACTTCTTTTCTATGGAATATC TGAATTCCGATATATTGAAATTTTTACTGATTGCAGGTGCTTATCTTGGATTGACTGGAAAGAGGATTTCTACTCCTTCA GATGCAATATATGTTGGCCTTGGAACACATTATGTGACATCTGGAAAGTTAGGTTTATTCAAGGAGGCTCTTTTGGCAAC TAACTTGTATGTCAGCTTGAACTTTTTATTCGTTATTGAGACTCTTACTCAAGATATCTCCCTTTAACCTCATCATTTTG ATTGAGTTGGACCCCTGAAATGAAAATAATACATTGACTTGTTTGTGTAGACACAAGTCATTTACTTTCTGCAGCATGCA TTTCACTCATGGTCATCTTGGATGTTTGTTGAAATAATCTATCATAGTATTTACTTTGTTAAGAAGTACATAATTGCAAT GAGGGCATACATAATTATCTAACAAACTCATTGATTATTCAGTTCCCAGGACCCCCATCAGGACATCAAAGTACTCTTAG CAAGATATGAGTCCAACCCAGAGTCTGAGGCACAATTGAAATTGCTTTTACCCGAGATAATTTCTTCATTTGGAGGAAAT AAATCTGTTACTAAGACTGTTGATGAGCTTAAAAAACACCAGTCAAGTGCTGACTCTAACGGTATACTTATTGATCTATT ATTTATTTACATTATTCTGAAATGTCCAGATACAGCTGTTGTTGGCTTGTTTCGTATATCAAATATTTATGCTTGAAATT GTATGTTTGAATTTGTTGTAAATTGCTTGTCTAGTCGTTGTAATTTTCTTGTATTTTTCTATTTCTAGTTGTGGAGTGGG CTAATGAAGCTCTCCAAGGCCTTGGAAAAGGTGCTCCTTTTTCCCTTTTCTTGACCAATAAGCACTTCTCTGCAGTTGCC TCCGCAGTAGCGAAAAATGACGTTGAATTATCCACAGTAAGCACTTTTTTTGGGGGGATTGGGTGGGTTAAGGTTTCCAT GTTTCAAAATTAATTCAATGTCTATTCTCTACATTTGAAATAATCCAGCTTAATGCCGTAATGAAAACTGAGTATCGGAT TGCCTTGAGGTCTTCACTGCGACATGATTTTGCAGAAGGTGTCCGAGCAGTATTGGTTGACAAGGATCAGGTTTTCTCTT TTTCTCATGATTTTTATACTTTTTATCTGGTAGTCAAACTTCAATTCTAGTTTTCCCTAAACTAGGAAATGATAGATACA ATTGATATGTCTGCAGAAGGCTAGTGTATGTATTACTCTATTACTAATACTAATAGTTAATACTATCTGTTTTACCTTGG GGGGGGGGGGACTTATTGTCGGTGAAGTGAAATCATGTGAACATATGTTTCTTCTGTGTTTATACTTTATACTTATACTT CCTTTCTTCCCTAGCTTCACAAATACTTGAATCTTCCGTTGAAAGTACACGTGTCTGATTTATCTGCATATGAATCTACA GTTTAAAGTATTTAAATTTGGTTCTGTCTTCATATAGTTCCTTCTGTGTGCTATCTTTCTAGTGCTATGAATCTTTTATA TGTTCTCTTTAATCCATGAAGTTATTTATCCTTCAATATTTGGTAAATTTTGTTTCCTGCTTGAGTAATAGATTCAATTA CTATTCTCCTGCAGAACCCTAAGTGGAAACCATCAAGATTGGAAGAAGTTGATCCAGGTGAGGTGGAAGAAGTTCTTAAA CCACTAGGACCCCAGGTTGGGGAGTTGTCTGTGTAATTAGAAGGAAAATGTAGTCTTCTCGTTTCTACAAATGCATTGTA GAATTACAGGGACTGCATCAAATAAACAGATGGTGTTATCAATGGGTCCATGCAAGTGTCAGGGAACTCCATGACCTTGG ATAGGTCGATGTTCCAACTAGTATACCCACATCTGTAAAAATGAAGGCTATGGTTTCGAAAATTTATCTTATTTTTGTAA TTTTTGGAAACTTTGAAATGTCCAAGACTTTACATGGAATAGATGGGCGAGTGCATTTAATGCCTTCATGAGACCTTATC TCATGTAGGTCTAAAATAAGGTTGTGTTTGTTTTATCATCTTTTTGGGAATGATATTTAAGAGAATACTATGACTAAAAT GTTATTATGTAAGTTTATCAATATGTTTGATAGACTTATAAAGATTTTGTTAGACTGACCATCTAGGAATCAAGTATAGA AAAGATGAGTGTTTAACGTAGTGATAGAAAAATGAAAATTTTGTAATTTCTGAAATACAATTATCCACTCAATCTCGGCT AATATTCTCAACATAGGAGATTTGATATTGTAATGCAATTCCCCTTGATTTTTCTCAGAACCCAAATATCAAAAATGAAG ATAACATTAGAAGGAATGAAGAGGGAAGGAAGAGAAAGTACACCAATGAAAGTTGCACGCTTGAAGGCTAAGAGCCTAAG ACCATTCCTCAAAATCACTCAACCTTTCTCTTTCCAGCTTTTTCCTATTCAACTCGGCTTCATAATTTCTGTATCTTCCA CTCATTTTCTTCTGCAATCAAAGACTACAAATTATGTTGTTGATCATACGTTGAATAGTTTCAAAAACCTACTACTACAT TCACATTTGACCAAAAGAGAGAACATAGAATCCGAGGATGCCTCCTAGAATCTTACTGTATATGATCCAAACATAGCCTC ATTTCTGAGAAACACGCATTGAAGATCACTTAGATTGTCTCGAAAAACTGCTTCAACTTGCAGTTAAAC
CDS sequence (LotjaGi4g1v0451100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCGTGTAGGAGGAACTAATCGAATTCTGAGCTTACTCACTTTCTCTCTCACCAAACCTTCTTCTTCTTCTTCTTCTTC CTCCATCACTTTCCGATCATTCTCCGCCATGGCCGCCGAAGATGATTTCGTCAAGGGCACTGTTCATTCCAACGGCGTCG CTGTCATCACGCTCGATCGCCCCAAAGCTCTCAACGCCATGAACCTAGATATGGATGTAAAGTATAAAAGTTATCTTGAT CAATGGGAATTGGACCCGAGGGTCAAATGTGTGCTGGTTGACAGCAGCTCGCCTCGCGCCTTTTGTGCTGGTATGGATAT TAAAGGGGTTGTTGCTGAAATACAAAAGGACAAAAGCACACCTTTAGTGCAGAAGGTCTTCACGGCTGAGTATTCTTTGA TATGCAAAATTGCTGAGTACAAGAAGCCATATATAAGCTTCATGGATGGAATTACAATGGGTTTTGGAATTGGCTTATCT GGTCATGGCCGCTATCGTATCATAACAGAGAGAACTGTTCTTGCAATGCCCGAAAATGGAATTGGCTTGTTCCCAGATGT AGGTTTTGCTTATATCGCGGCTCAAAGTCCAGGAGAAGGATCTGTTGGTGCTTATCTTGGATTGACTGGAAAGAGGATTT CTACTCCTTCAGATGCAATATATGTTGGCCTTGGAACACATTATGTGACATCTGGAAAGTTAGGTTTATTCAAGGAGGCT CTTTTGGCAACTAACTTTTCCCAGGACCCCCATCAGGACATCAAAGTACTCTTAGCAAGATATGAGTCCAACCCAGAGTC TGAGGCACAATTGAAATTGCTTTTACCCGAGATAATTTCTTCATTTGGAGGAAATAAATCTGTTACTAAGACTGTTGATG AGCTTAAAAAACACCAGTCAAGTGCTGACTCTAACGTTGTGGAGTGGGCTAATGAAGCTCTCCAAGGCCTTGGAAAAGGT GCTCCTTTTTCCCTTTTCTTGACCAATAAGCACTTCTCTGCAGTTGCCTCCGCAGTAGCGAAAAATGACGTTGAATTATC CACACTTAATGCCGTAATGAAAACTGAGTATCGGATTGCCTTGAGGTCTTCACTGCGACATGATTTTGCAGAAGGTGTCC GAGCAGTATTGGTTGACAAGGATCAGAACCCTAAGTGGAAACCATCAAGATTGGAAGAAGTTGATCCAGGTGAGGTGGAA GAAGTTCTTAAACCACTAGGACCCCAGGTTGGGGAGTTGTCTGTGTAA
Protein sequence (LotjaGi4g1v0451100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRVGGTNRILSLLTFSLTKPSSSSSSSSITFRSFSAMAAEDDFVKGTVHSNGVAVITLDRPKALNAMNLDMDVKYKSYLD QWELDPRVKCVLVDSSSPRAFCAGMDIKGVVAEIQKDKSTPLVQKVFTAEYSLICKIAEYKKPYISFMDGITMGFGIGLS GHGRYRIITERTVLAMPENGIGLFPDVGFAYIAAQSPGEGSVGAYLGLTGKRISTPSDAIYVGLGTHYVTSGKLGLFKEA LLATNFSQDPHQDIKVLLARYESNPESEAQLKLLLPEIISSFGGNKSVTKTVDELKKHQSSADSNVVEWANEALQGLGKG APFSLFLTNKHFSAVASAVAKNDVELSTLNAVMKTEYRIALRSSLRHDFAEGVRAVLVDKDQNPKWKPSRLEEVDPGEVE EVLKPLGPQVGELSV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 25 | 25 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 23 | 23 | - | – | |
| Phobius | 1 | 8 | 8 | - | – | |
| Phobius | 9 | 17 | 9 | - | – | |
| Phobius | 18 | 25 | 8 | - | – | |
| PANTHER | 24 | 415 | 392 | 7.4E-218 | – | |
| PANTHER | 24 | 415 | 392 | 7.4E-218 | – | |
| Phobius | 26 | 415 | 390 | - | – | |
| SUPERFAMILY | 41 | 389 | 349 | 1.78E-48 | ||
| Gene3D | 44 | 413 | 370 | 1.3E-103 | – | |
| CDD | 51 | 234 | 184 | 1.65006E-42 | – | |
| Pfam | 54 | 402 | 349 | 2.3E-105 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | 3-hydroxyisobutyryl-CoA hydrolase activity | Catalysis of the reaction: 3-hydroxy-2-methylpropanoyl-CoA + H2O = CoA + 3-hydroxy-2-methylpropanoate. |
Expression pattern of LotjaGi4g1v0451100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…