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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0456600 |
| Transcript ID | LotjaGi4g1v0456600.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Histone-lysine N-methyltransferase; TAIR: AT1G24610.1 Rubisco methyltransferase family protein; Swiss-Prot: sp|Q5ZML9|SETD3_CHICK Histone-lysine N-methyltransferase setd3; TrEMBL-Plants: tr|A0A0L9T8E4|A0A0L9T8E4_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0456600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:82809541..82813380) extracted from Lotus japonicus Gifu genome v1.2.
CTATACACGGCGGAGAGGGTGATCCTCACTCCATCCCCGAATTTGTTTCAAGGGATTTTCGTCTCATCCCTAGGCGGATC ACCGCGGGAATTGCCATCCCCAGTAACGAGTTTAATTATCGTCGCAAAATCCCTGACAACTACTTACAAATGACAAAGAT TTTGTGACGGTTTTTTCTTCTGTCGCAAAAAGTTGGATTTTTCAATTAAAAAAACCACATATTAACCTTCGAAGGTTGTG ATTCTATTGAAGGCCAACACAGGTTTCAGAGCAGGGGAGATTCGGTTATGGCTACATCGAAGATGGTCATGTCTTCGCTG ACCCACTTGCGTCCACTAACCTGCGCCGCCTCCGCATCACGAATAGTGTCTCATCCACCTGACCTTATCAACTGGGTTAC CAGAGAAGGTGGCTTCGTGCACCGTGCGGTGAAGATAGCTCAGCTTGGCTCCAATGGTTTAGGACTAGTTGCTAAGCAAG AAATTCCAATGGGCAGTGAGCTTATTGTTCTTCCTCACCATATTCCTCTGCAGTTTCCCTCTCTTGATGTCAACCCTCAT GACTCTGCATTGCTTCAACTGGTTCACCATGTTCCTGGTATTGTTATGGTTCTATTTTTTTTTTTTCTCAACTTTCTTTC AATTCGAGTTATTCTATGAAATGGGCGTTAATTCAATGTAAAAAATAATCGAATGTTTGGAAATTGAAATCTTTCTAGGT GTGTGTTAAGTTCCATGTTTGAAGCATAAACACCACTGCAATTGATTCTAAAGCCAAAATCAATCAGGGGAGAAGCTTCC TGCTTCTAGGCGCCTACGGCGCCGTAATTGATTATGAGAAAAATAAGTTGATCCAAACATGTATTGTCCTTGTTCACACA TGTTAATAGAAGAGCATGTAGAGAATTTTTTTCTATTCAGTGTATGCTGGTGGCTCATGTTCTAAAAAATAGGCTCTACT ACTGAGTTTTCAATGTAAATAAATTGGACACTATGGTAGCATTTGACAGAGGAACTGTGGGCGTTAAAACTGGGTTTGAA GCTTCTGCAAGAAAGAGCAAAAGTTGGATCCTATTGGTGGCCATACATCAGCAATCTCCCGATAACATACAGTGTGCCTA TCTTCTTTCCTGGGGAAGACATCAAGAACCTGCAGTATGCTCCTCTTCTTCACCAGGTACTGCTCTCCTGAATTGCATAA AACCATTTAGGGCTGACTCTGATGAAACAGTAAAAACTGAAAAGTTTCTTCACCTCAGTGCAGAGGACTAGACAAGAATT GATTTTGGCAATTTTCAATTTGACAAGAGGATGAGTAGTTGATCTCCAATATAAAATGTTTCTCTAGCATCATATAGTAT ACATTGAAATTTTTGGAAACGTATTTTATGTCCCTTATTTTTCAAAAAAAGTAGGTTTTCTAAAGTGGATGTATTAAAAC CATTTGAAATGCCTAGCTAACAAGTTTTAATGTGCCAATGCATCTACTTCATTTTGCTATTGGGGACATGAGAGAGATGC ACTTTGATTTGATCCCTGCAGCTAATTGGATCCTAATACTTGAAGGCACATCTGTATCCAACACCATAAGCTGAATTGCC TATATGACGATCTATACCATGATGCAGGTAAACAAAAGATGCAGGTTTCTTCTTGAGTTTGAGCAAGAAGTCAAGCGTGC CTTAGCCAGTCTTACACCAGATAAGCATCCTTTTGGTGGCCTAGAAGTAGATGCACCTTCTCTTGGATGGGCGATGTCAG CAGTCTCATCTAGAGCATTCCGGCTGCATGGTAACAAGGATCCAAATGGAACACACGTTGACATACCCATGATGCTCCCT CTGATTGACATGTGTAATCATAGTTTCAATCCAAATGCTAAGATTATTCAGGAACAAGATAGCAGTAGCACAAAGATGCA AGTGAAGGCATGTTTTCTAAATACTCTTTCCTACACACCCCAACACACACACACATCAAATCCTGCTTATAAGAAACAAA CTTATGTAGTTTTGCTGGGGTGATCCAATTTTTGCCTCAGGTTGTGGCCAAGACAACTATCAAAGAAGATGATCCTTTAT TACTTTGCTATGGCAATTTAAGCAATGATCTTTTCCTTCTCGACTATGGATTTGTGATGCACTCAAACCCTTATGACTAT ATTGAGCTCAAATATGATGGTGCTTTTTTGGATGCTGCAAGCACGGCTGCTGGAGTTTCTTCACCAAACTTCTCGACACC TGCTCCCTGGCAGGAACACATTTTATCTCAGCTAAACCTAGCGGGAGAAGCTCCAGATCTCAAGGTTTCTTCCTCTTAAG TCCACAATCCTGTTTTATTATCACTGTTTGAAAACAAACCAAACTACTATTGCATCATTGCATGTTAAATTAGTGCCCTT CTGTCTTATATAAGCTTACGGTATATTGCTGCAAAGATTTAGTGTTTTCTCTGTACTTTTGATGCATCAATATCACATCC ATTATTTTCAGTCCTCCCTTTTACCATAGTTCTTAAATGCCTTTTTTATATTAAGTGTGTGTTTGGGTCAACGAATCAAC GTTCTCACAATTGATTTTTTTTTTTTTGAAGTTGTTGATTTGATTTGGCAAAATTGATTATAGTAAAAGTGAGTTGAAAG TGAAGTGATTTATTTTTGGATATATTTATGGAAAAATTGGTTATTTTGTGGGGTAATGTGTTATCTAATCCAAATAAAAA ATTTCATAACTGATTATGTTCGACGCAATCAAGTCTCCAAAATGATTCCCAAACATCTATACTTAGCATGTCTGGATCGG CTTCTTATTCATTAGAATCAATTTTGAAACACATAAGCTACCCACAAGCTTCTCCCCAAAATTGATTCTGCTTTATGAAT AAATTGTAGAAGTGTTTCCAAACATCCATATTGTCATCCAAAATTTATTTTCCTCTTCGTAATTGGTTATGGGGTTTTCC GATAGGCACAAGTTAATTTATTTGTTTTCTTGTAATAGGTGAGCTTAGGTGGTCAGGAAATAATAGAGGGGCGCTTGTTG GCTGCATTAAGGGCCCTCCGTGCAAGTGATGCGGAAACTGTGCAAAAGCATGACCTCAACACTCTCAAGTCTTTACATGC TGAGGCTCCTCTTGGTGTTGCAAATGACATTGCTGTATTTCGCACCCTCATTGCTCTGTGTGTCATTGCACTGGGACACT TTCCCACCCAAATAGCAGATGATGAATCACTGTTGAAGCAGGGCGCTCCAGGTTCAACTGAGTTAGCCATTCAGTTCAGA ATGCAAAAGAAATCTGTGATTATAGATGTTGTGAGAGATCTCTCAAGGAGGGTAAAGCTTCTCTCATCAAAGGAAACAGT GACCGCCGAGGGCTAATAGCGTGCTTGCATTTGGCAGTAGACACAATCTAAAGCACGGTAACTCCTGAAGCTAGACTCTG TCGCTTCTCCTCAGAAGTCACAAGTAGAACCAAACACGCAGCATGTTTGTTTGACTGCTATCATGAATCTCATTCCATAT CTTGTTCCCTTCACCACCACCTACGTTATCCTTTTCCTTGTTCTCTTCCCTTTTCTGTTTCTTTCTGATGGATTTCTTTT CTCCCTTTAATATTCTCTTGTCACTTTTACTCTATTGTTATCTTGTTGTTTTATTTATCATACTTGATAGTTGATACTTT AGTGGTCAGTGGAATTTTGGTTAGAAACATCTTCTATTGAAATATTAGCACTGCCTTTGATTATGTTTTCTGTCAACTTA GTCATGATATGTTACTTTTACATTATTCTATTGCTTTCAATCATTGGTATTGAATAAGAATAGTTAGTTTTTCAAGCAAA
CDS sequence (LotjaGi4g1v0456600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTACATCGAAGATGGTCATGTCTTCGCTGACCCACTTGCGTCCACTAACCTGCGCCGCCTCCGCATCACGAATAGT GTCTCATCCACCTGACCTTATCAACTGGGTTACCAGAGAAGGTGGCTTCGTGCACCGTGCGGTGAAGATAGCTCAGCTTG GCTCCAATGGTTTAGGACTAGTTGCTAAGCAAGAAATTCCAATGGGCAGTGAGCTTATTGTTCTTCCTCACCATATTCCT CTGCAGTTTCCCTCTCTTGATGTCAACCCTCATGACTCTGCATTGCTTCAACTGGTTCACCATGTTCCTGAGGAACTGTG GGCGTTAAAACTGGGTTTGAAGCTTCTGCAAGAAAGAGCAAAAGTTGGATCCTATTGGTGGCCATACATCAGCAATCTCC CGATAACATACAGTGTGCCTATCTTCTTTCCTGGGGAAGACATCAAGAACCTGCAGTATGCTCCTCTTCTTCACCAGGTA AACAAAAGATGCAGGTTTCTTCTTGAGTTTGAGCAAGAAGTCAAGCGTGCCTTAGCCAGTCTTACACCAGATAAGCATCC TTTTGGTGGCCTAGAAGTAGATGCACCTTCTCTTGGATGGGCGATGTCAGCAGTCTCATCTAGAGCATTCCGGCTGCATG GTAACAAGGATCCAAATGGAACACACGTTGACATACCCATGATGCTCCCTCTGATTGACATGTGTAATCATAGTTTCAAT CCAAATGCTAAGATTATTCAGGAACAAGATAGCAGTAGCACAAAGATGCAAGTGAAGGTTGTGGCCAAGACAACTATCAA AGAAGATGATCCTTTATTACTTTGCTATGGCAATTTAAGCAATGATCTTTTCCTTCTCGACTATGGATTTGTGATGCACT CAAACCCTTATGACTATATTGAGCTCAAATATGATGGTGCTTTTTTGGATGCTGCAAGCACGGCTGCTGGAGTTTCTTCA CCAAACTTCTCGACACCTGCTCCCTGGCAGGAACACATTTTATCTCAGCTAAACCTAGCGGGAGAAGCTCCAGATCTCAA GGTGAGCTTAGGTGGTCAGGAAATAATAGAGGGGCGCTTGTTGGCTGCATTAAGGGCCCTCCGTGCAAGTGATGCGGAAA CTGTGCAAAAGCATGACCTCAACACTCTCAAGTCTTTACATGCTGAGGCTCCTCTTGGTGTTGCAAATGACATTGCTGTA TTTCGCACCCTCATTGCTCTGTGTGTCATTGCACTGGGACACTTTCCCACCCAAATAGCAGATGATGAATCACTGTTGAA GCAGGGCGCTCCAGGTTCAACTGAGTTAGCCATTCAGTTCAGAATGCAAAAGAAATCTGTGATTATAGATGTTGTGAGAG ATCTCTCAAGGAGGGTAAAGCTTCTCTCATCAAAGGAAACAGTGACCGCCGAGGGCTAA
Protein sequence (LotjaGi4g1v0456600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MATSKMVMSSLTHLRPLTCAASASRIVSHPPDLINWVTREGGFVHRAVKIAQLGSNGLGLVAKQEIPMGSELIVLPHHIP LQFPSLDVNPHDSALLQLVHHVPEELWALKLGLKLLQERAKVGSYWWPYISNLPITYSVPIFFPGEDIKNLQYAPLLHQV NKRCRFLLEFEQEVKRALASLTPDKHPFGGLEVDAPSLGWAMSAVSSRAFRLHGNKDPNGTHVDIPMMLPLIDMCNHSFN PNAKIIQEQDSSSTKMQVKVVAKTTIKEDDPLLLCYGNLSNDLFLLDYGFVMHSNPYDYIELKYDGAFLDAASTAAGVSS PNFSTPAPWQEHILSQLNLAGEAPDLKVSLGGQEIIEGRLLAALRALRASDAETVQKHDLNTLKSLHAEAPLGVANDIAV FRTLIALCVIALGHFPTQIADDESLLKQGAPGSTELAIQFRMQKKSVIIDVVRDLSRRVKLLSSKETVTAEG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 22 | 22 | - | – | |
| Gene3D | 3 | 290 | 288 | 1.0E-52 | – | |
| PANTHER | 22 | 468 | 447 | 7.5E-75 | – | |
| PANTHER | 22 | 468 | 447 | 7.5E-75 | – | |
| SUPERFAMILY | 31 | 295 | 265 | 5.49E-47 | – | |
| SMART | 46 | 283 | 238 | 4.0E-9 | ||
| ProSiteProfiles | 46 | 277 | 232 | 10.189 | ||
| Pfam | 57 | 277 | 221 | 1.4E-10 | ||
| SUPERFAMILY | 287 | 466 | 180 | 1.02E-21 | ||
| Pfam | 328 | 447 | 120 | 1.3E-13 | ||
| Gene3D | 328 | 467 | 140 | 8.6E-14 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi4g1v0456600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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