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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0456900 |
| Transcript ID | LotjaGi4g1v0456900.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ankyrin repeat-containing protein family; TAIR: AT2G01680.1 Ankyrin repeat family protein; Swiss-Prot: sp|Q9ZU96|Y2168_ARATH Ankyrin repeat-containing protein At2g01680; TrEMBL-Plants: tr|A0A151T394|A0A151T394_CAJCA Ankyrin repeat-containing protein family; Found in the gene: LotjaGi4g1v0456900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:82820015..82824218) extracted from Lotus japonicus Gifu genome v1.2.
TCTTAGTTTAGGTAGAGTATCTATCACCATACAAGCACATTCCAGCCCCTAGTTACATATCAATGTTTAATTAAAAAACT TATCCCTCACCCTGAATTTTCTTATGAAGGAGACAGAAAAGAAATCTTAAATCAACTGGTATGGTTTAATTAGTATTTTA TTTTATTTCTTAACATCCAGATGTAGTTTAAAGCTTGCATTGGTGGTGTTGTCTCATTGTGAAAGTCAATGGCATTACTT GGATTTTCTGTAGAAAAAAGACCTCACCATCAAAATCAAACATTATCAGATATCATTTATTACACACTCCAATCCAAATA ATTGAAGAGATTGAAATCAATGGAATGGAGAAAAACAACAACCACTTGGTTGGTGCTCAATGCTCACATCCATATCTCAA TTCCCACTTCATCTCTCTCTCACTTTCTCTCTGAATACTTTTTTCATTGTTACAGAGAAGAGTTTCACACTTTTCACAGC ATCTTCTCATCTGGGCCAGTTGAAAAACAGAGTTTCATGCAGAGTTTCAATCTTTTTTGAGAGTGATGGAGTCGAAGGCT CTACGTTTCATAACCCACCAATCAATTTTCTCCATAGTTGGATCTGGGGACTTTGATGGGTTGAAGAAAGTGGTGGAGCA GCTGAAAAACGACGATGGTGGTGGTGATGGGTCATCATCATCATCATCATCATCGTCGCTTTCTGAAGTGATGTCCCTTC AGAACGATGCTGGAGAGACCGCACTTTACATCGCTGCAGAGCGTAATCTGAAGGAGGTGTTCAGCTTCTTGCTCAAGTTG TGTGACTATGAGGTTGTTAAGATTCGGTCCAGGTCTGATATGAACGCGTTTCATGTTGCAGCCAAGCGTGGCCATCTGGG TATTCCTGCTTCTTCCTTTCATTTTTGTTGAGTTGGTTTGATTGATATTAATGGATCAACTAGCTGGCTTAGTCCGTGTT TGGTTCAATGTTCAGAATTGGTTGGGGATAGAATTGATTTTGCTAAAATTGATTCCAAATAAAAGGTAGTTAGTGCATGT TTGGAACCCTTCTATCACTGATAGCTTTTGGGTTCTATGATGAATTCTAACGAAAGAGAAGCTGATCCAAACAAACAATT TATTAGAAGTGAAATGATTTATGTTTGGTTACTTTTATAAGAAAGTGGTTTTGCTTTGCTAATGTGAAATTCAGTTGTAA AATCCCATACTTGATTATATTCACCACGAAAGCTAGGGCGATTTGTAGTTTTTTCTCATAATCAGTTCCAGAGCTAGAAT CAATGGTGAAGGAAACGTCCAAACACCCAAAAATTGATTCTGACAATGGAGAATCAATTTTAACTCTCACAAATATTGAA CCAAACATGTTCTTAGTTGGAAAGAGGCGTACCCTTTTAACTTTGAAATCACATGAGTTTATTTTTGTTTAATAGTTTAA GTTATCAGTGGAATGTTGATATAGTTAAGGATTTCAATTAGGATATCTTATCATGGCCAATCTTTTTTCCAGATATCGTG AGGGAGCTTTTGAGTACTTGGCCTGAGGTTTGTAAGCTATGTGATTCCACGAACACAAGCCCTCTATATGCTGCTGCAGG TCAAGACCACTTGGATGTGGTGAATGCTATTTTGGATGTTGATGTCAGTTCCATGTTTATAGTTAGGAAAAATGGCAAAA CTTCATTACACAATGCTGCTAGGTATGATGTCCTTCGTATAGTGAAAGCACTTATTGCCCGGGATCCTGGAATAGTTTGC ATCAAAGATAAAAAGGGTCAAACTGCACTGCACATGGCTGTCAAAGGACAGAGTACATTAGTGGTGGAGGAGATTTTACT AGCTGATCCTACTATATTGAATGAACGAGATAAGAAGGGTAATACAGCTCTTCACATGGCGACAAGGAAAGGCCGTTCAC AGGTTAGACTCACATTCTCTTGAACCATAGTTGCAGTAAGTGTTTGGATATTAGTTGAGTGTAATGTGAACGGATTTTCA TCCCAATTCGTAACAAAGGATTTCATTTACTTCTTCATCTCGAAGTGAGTACTAACGCCCATTTGCACCAGTGCCAACAG GTATCCAAACATAATTGTAGATTTTTTGTTTTTAAATGTATTTGCTTCAGGTTTCATCAAATCTTGGTTTTCTTGAACAT AAGCAAGTTGTTAGATGGGAAAGATCTTAGATGGCATGGGGTACGTGGTAATTTGAGATTTAACTCTTTTAAAGTGATGG AGTGCATTTCAGAGGATAAAGTGAATAGATGACTATGGCTTTTTCAATCAATGATTAAAATCATGAAAAATACTTGTACA TGCATAACAAACTATTAAGTTTGATAAAATCCAAATTATTGATTTTCCGATCAATGTTTATAACTCCGCACTTATCCTCT AAAGTGTGCCTCCCTCTTTAGAGCAGTCAAATCGGTATATTTAACCTATATGGTTTATAGGGAACTAAGCATGTGACTTT TTATCCCCAAATTGTGCTTATACTTATGTGTTTGGATACCAATTGAGTGCAACGTGAACGGACTTTCATCACAATCCATA AGAAAAGTTCTGTTTACCTCTATTTGTCTCGAAGTGAGTGCTAATATCCGTTTGCGCTAAACATATCCCATATGCTGGGG TTTATTTAAACATAAATTGAACAAAATGAATGCGCTTGCTGCCTTTCTTGACTTTTGTTGCAATGGATTTTTCTGCCTCA TTTTTATTTTAGCTTCCTTTACTAACACATGGAATTTTTTTTCCAGATAGTGAACCTTTTGCTAATCTATACAGCTACGG ACATTAATGCCATCAATAAGCAACAAGAAACAGCCTTGGATTTGGCAGATAAACTTCCATATGGAGATTCAGCTTTAGAA ATCAAGGAAGCCCTTTCAGAATATGGTGCTAAGTATGCCAGGCATGTTGGCAAAGTAGATGAAGCCATGGAACTTAAAAG AACAGTGAGTGATATAAAGCATGAGGTGCAGTCACAGCTTATACAAAATGAAAAAACTCGCAAACGAGTCTCCGGCATCG CTAAAGAACTGAAGAAACTTCACAGAGAAGCAGTTCAAAACACCATTAATTCCGTCACAGTTGTTGCTGTCCTTTTTGCC TCTATAGCATTCTTGGCTATATTCAATTTGCCTGGTCAATATATAATGACAGGATCAGAGACAGGGAAGGCGAATATAGC GGATCATGTTGGATTCCAAGTTTTTTGCTTCTTGAATTCAACATCCCTCTTCATTTCTCTTGCAGTTGTTGTGGTTCAGA TCACTTTGGTAGCATGGGACACTAGAGCCCAAAAGCAGATTGTGTCAGTGGTTAACAAGCTCATGTGGGCTGCATGTGCT TGCACTTGTGGTGCTTTTCTTGCAGTAGCTTTTGAAGTTGTTGGAAAGAAAACATGGATGGCTATTACCATCACCATTTT GGGAGTGCCAATTCTTTTGGGGACTCTAGCAATCTTGTGCTACTTTGTGTTTCGCCAACATTTTGGGATTTTTCGCAGCG ATTCGCAGAGGCGGATCAAGAGAGCAAGTGGAAGCAAATCTTTCTCATGGTCTTACTCTGCACATATCTCAGATTTGGAT GATGAATATAATTCTGACATTGAGAAGATCTATGCTCTATGAGGTATAAACCAAGAATCAAATGTTACCCAAAGAACACT GTTTCAACTTTTTGACTGAGGCTGGTATCCCACTGCTGAGGTTTCAAGTGACTATTCAGATGTTTGCCCACTGGGATATA GATCATTCATCTTGAGTTTGTAGTTTAAAGTTTCAGTTAGAGTTTGCATTTGCTAATGTCTGAGATTATGATTACTAATC AGCACTTGTAGATGTATGTATATGTGAAAAAAATAAAAATAGAAATGAGTTCCACTGCTAAAGTTGACTAAGGAACAAGC ATTCTTAACACAAAATGAAAATGCATTGTCCAGCCCTCTTAATATTTACTCTCATCATTGCACCATTTACGGGTAAACTC ACTTAGGTTATGACTGGTTTAACGTTTATGACCCTGTTTGTGTTGGGAGTTGATGTCCATGAAAGAAAAGGGAGCACCCT CCTTCTTTCACGATTTCCACCTATGAAAGCTCAATCCCACTTTTCAAAGCAAATATAAGTCATTTATTACATATTTAAAC ACTAAATCAGTACAATCATCTTCACTCACACATTAAGATTTCAG
CDS sequence (LotjaGi4g1v0456900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGTCGAAGGCTCTACGTTTCATAACCCACCAATCAATTTTCTCCATAGTTGGATCTGGGGACTTTGATGGGTTGAA GAAAGTGGTGGAGCAGCTGAAAAACGACGATGGTGGTGGTGATGGGTCATCATCATCATCATCATCATCGTCGCTTTCTG AAGTGATGTCCCTTCAGAACGATGCTGGAGAGACCGCACTTTACATCGCTGCAGAGCGTAATCTGAAGGAGGTGTTCAGC TTCTTGCTCAAGTTGTGTGACTATGAGGTTGTTAAGATTCGGTCCAGGTCTGATATGAACGCGTTTCATGTTGCAGCCAA GCGTGGCCATCTGGATATCGTGAGGGAGCTTTTGAGTACTTGGCCTGAGGTTTGTAAGCTATGTGATTCCACGAACACAA GCCCTCTATATGCTGCTGCAGGTCAAGACCACTTGGATGTGGTGAATGCTATTTTGGATGTTGATGTCAGTTCCATGTTT ATAGTTAGGAAAAATGGCAAAACTTCATTACACAATGCTGCTAGGTATGATGTCCTTCGTATAGTGAAAGCACTTATTGC CCGGGATCCTGGAATAGTTTGCATCAAAGATAAAAAGGGTCAAACTGCACTGCACATGGCTGTCAAAGGACAGAGTACAT TAGTGGTGGAGGAGATTTTACTAGCTGATCCTACTATATTGAATGAACGAGATAAGAAGGGTAATACAGCTCTTCACATG GCGACAAGGAAAGGCCGTTCACAGATAGTGAACCTTTTGCTAATCTATACAGCTACGGACATTAATGCCATCAATAAGCA ACAAGAAACAGCCTTGGATTTGGCAGATAAACTTCCATATGGAGATTCAGCTTTAGAAATCAAGGAAGCCCTTTCAGAAT ATGGTGCTAAGTATGCCAGGCATGTTGGCAAAGTAGATGAAGCCATGGAACTTAAAAGAACAGTGAGTGATATAAAGCAT GAGGTGCAGTCACAGCTTATACAAAATGAAAAAACTCGCAAACGAGTCTCCGGCATCGCTAAAGAACTGAAGAAACTTCA CAGAGAAGCAGTTCAAAACACCATTAATTCCGTCACAGTTGTTGCTGTCCTTTTTGCCTCTATAGCATTCTTGGCTATAT TCAATTTGCCTGGTCAATATATAATGACAGGATCAGAGACAGGGAAGGCGAATATAGCGGATCATGTTGGATTCCAAGTT TTTTGCTTCTTGAATTCAACATCCCTCTTCATTTCTCTTGCAGTTGTTGTGGTTCAGATCACTTTGGTAGCATGGGACAC TAGAGCCCAAAAGCAGATTGTGTCAGTGGTTAACAAGCTCATGTGGGCTGCATGTGCTTGCACTTGTGGTGCTTTTCTTG CAGTAGCTTTTGAAGTTGTTGGAAAGAAAACATGGATGGCTATTACCATCACCATTTTGGGAGTGCCAATTCTTTTGGGG ACTCTAGCAATCTTGTGCTACTTTGTGTTTCGCCAACATTTTGGGATTTTTCGCAGCGATTCGCAGAGGCGGATCAAGAG AGCAAGTGGAAGCAAATCTTTCTCATGGTCTTACTCTGCACATATCTCAGATTTGGATGATGAATATAATTCTGACATTG AGAAGATCTATGCTCTATGA
Protein sequence (LotjaGi4g1v0456900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MESKALRFITHQSIFSIVGSGDFDGLKKVVEQLKNDDGGGDGSSSSSSSSSLSEVMSLQNDAGETALYIAAERNLKEVFS FLLKLCDYEVVKIRSRSDMNAFHVAAKRGHLDIVRELLSTWPEVCKLCDSTNTSPLYAAAGQDHLDVVNAILDVDVSSMF IVRKNGKTSLHNAARYDVLRIVKALIARDPGIVCIKDKKGQTALHMAVKGQSTLVVEEILLADPTILNERDKKGNTALHM ATRKGRSQIVNLLLIYTATDINAINKQQETALDLADKLPYGDSALEIKEALSEYGAKYARHVGKVDEAMELKRTVSDIKH EVQSQLIQNEKTRKRVSGIAKELKKLHREAVQNTINSVTVVAVLFASIAFLAIFNLPGQYIMTGSETGKANIADHVGFQV FCFLNSTSLFISLAVVVVQITLVAWDTRAQKQIVSVVNKLMWAACACTCGAFLAVAFEVVGKKTWMAITITILGVPILLG TLAILCYFVFRQHFGIFRSDSQRRIKRASGSKSFSWSYSAHISDLDDEYNSDIEKIYAL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 353 | 353 | - | – | |
| PANTHER | 2 | 539 | 538 | 4.0E-296 | – | |
| PANTHER | 2 | 539 | 538 | 4.0E-296 | – | |
| SUPERFAMILY | 15 | 295 | 281 | 1.19E-42 | ||
| Gene3D | 18 | 357 | 340 | 4.3E-45 | ||
| SMART | 62 | 92 | 31 | 39.0 | ||
| ProSiteProfiles | 62 | 275 | 214 | 35.915 | ||
| Pfam | 67 | 153 | 87 | 1.5E-10 | ||
| SMART | 97 | 126 | 30 | 0.79 | ||
| SMART | 131 | 161 | 31 | 160.0 | ||
| SMART | 165 | 194 | 30 | 0.46 | ||
| Pfam | 183 | 263 | 81 | 4.9E-11 | ||
| SMART | 199 | 228 | 30 | 4.4 | ||
| ProSiteProfiles | 233 | 266 | 34 | 10.873 | ||
| SMART | 233 | 263 | 31 | 9.2E-4 | ||
| Coils | 329 | 349 | 21 | - | – | |
| Pfam | 349 | 457 | 109 | 2.2E-24 | ||
| TMHMM | 354 | 376 | 23 | - | – | |
| Phobius | 354 | 376 | 23 | - | – | |
| Phobius | 377 | 395 | 19 | - | – | |
| Phobius | 396 | 425 | 30 | - | – | |
| TMHMM | 396 | 418 | 23 | - | – | |
| Phobius | 426 | 436 | 11 | - | – | |
| TMHMM | 435 | 457 | 23 | - | – | |
| Phobius | 437 | 459 | 23 | - | – | |
| Phobius | 460 | 464 | 5 | - | – | |
| Phobius | 465 | 490 | 26 | - | – | |
| TMHMM | 467 | 489 | 23 | - | – | |
| Phobius | 491 | 539 | 49 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi4g1v0456900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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