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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0459700 |
| Transcript ID | LotjaGi4g1v0459700.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 26S proteasome non-ATPase regulatory subunit 1; TAIR: AT2G32730.1 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit; Swiss-Prot: sp|O48844|PSD1A_ARATH 26S proteasome non-ATPase regulatory subunit 1 homolog A; TrEMBL-Plants: tr|I1KQE8|I1KQE8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0459700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:83051515..83057343) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCCACGACGCTCGTGAGCTCCGCCGGTGGGATGCTGGCGATGCTGAACGAGTCCCATCTATCGCTCAAGCTTCACGC TCTCTCCAACCTCAACAATCTCGTCGACACTTTCTGGCCCGAGATCTCCACCAGTGTCCCCCTCATGTACGCACGCATTC TCCTTTTCCCCCTCGATCTCTGCGTTTCTGTTTCTGAACTTGTGTTCTTGCGATTTGGGGTTTTGCGAGTGGTTTGAGAT GAAACTAGTTTGATTTCAATTGCTATTCCCTTTTAGTTTCTATGAGTAGAATAGCTAACGCTGAAGTGAAAAGCTGTTCA ATTTTTGCCCTAGGTTTGAATTACGTTTTAGTAGTGAAATTCCCTTTGCTGGGGTTCATTGCATTCATGTAACAATTCAC TTCCCGTATGCATTTAGTAATACAAATCTCCCATTCAATGTTATCATGACCTCTCAATCATGTGAGGAAGTTCTAGCTGA GCTACTTTATTAGTGAAGTCTACTGTTCTTGTTTTGTTTGATGGCATGATTGTTTTCCCTTCTGTTACTTGGTTATATTA AATCTTTGGTGCAGTATGGTTAGAAATTGGAATTTTGAAATTTGTTTTGATGTATGTATTGAACAGAGAGAGTTTGTATG AAGATGAGGAGTTTGATCAGCATCAAAGGCAACTTGCTGCGCTTGTCGTATCTAAGGTATTTTCTTTCTGCTAAGTATTT GAACTAGCATCTTTTAATGAAAATTAAATGAACCTATTTTTTTCTTATCAGGTCTTTTTCCTCGAGTTGCTTACTTTAAT GGTTAATTTTTCTTAACCAGAGGACAAATGTTTTCTCACTTCCATAAGTTTTTATTCTTAGGTACTAAATTTGGTGTTGT CGGTTGTCTTTTGTTATCTAACCTTGTTTTGCTCTTCCATCTTCAGGTCTTCTATTACTTGGGCGAACTTGATGATTCAT TATCTTATGCCCTTGGAGCTGGTCCTCTTTTTGATGTTTCTGAGGATTCTGACTATGTGCACACTCTTCTTGGTGAGAAT TATTATCTGGTTTTGATTTTTGATATAGCAATGGTATACAAACTTCTCCAGGGCATCTTTTAATGTCATGTATGAAAGTG GGACTGCATTGGTAATATTGGTTCAGTTGATGTTACTTGTTAGTGGTTTGGTGTATTTCATTTGAACATATTTAGAAATA ATGTCATGAGTGTAAATTAATTTTGAAGTATACTACAATTATATGATATGTTCCAAACTTCCAATTGACATTTTACTGAA TTTCCTTTATCTTCAGTTAAAGCCATAGATGAATATGCTAGTCTCAAGTCTAAGGCAGCAGAATCAGGTGATACATCTAT CAAATCGGATCCAAGGTTGGAGGCGATTGTGGAGAGAATGTTTGATAAGTACGTAAGCTGCAGTCTTATGGCTTTGGGTT CAAATTGCACCTTAACTCTTTTGAGTTTCCTCACTTTTTGCTGCTTTTCCCTAATTTAGGTGTATCATGGATGGAAAGTA CCAACAGGCCATGGGAACTGCCATTGAGTGCAGGAGGTTGGATAAACTAGAGGAAGCAATTACAAAGAGTGACAACGTTC AAGGAACTCTATCATATTGCATTAATGTCTCTCATTCCTTTGTGAATCTTAGAGAATACAGACAGGAGGTAAGGGGATGG AGATTATCTAGTTATATAAGTCCTATACACAGCATGTTTCTGTTGAATATTTTCCTTTTGCACCGCATTAAAGTTAGCTA GAAGATCATATTCTATTGAAGTTCTTATGGTTTAAATTATCTTTGAAGTGTCTCTTTAGGATTCGATGCTTAATTAGGCC CATAAGTCCTTACAACTGTATTACTCAAATGAGTAGAATGTTTGTCCTGCTGGACAGATTTATGTAATCAAGTGGAAGAT CTGATGGATACTCATAGAAGTTGGAGTATATATATTATAGTGATGAAAAATTTTATTACCTGTGGCATATTTTATTGTTA GAGGTTACTGTTAGTACTTTGTTTAGGTATGGGTGTAGACTGTTATAGTCTTGATTGCACTGTATCTCAGCTTTTGTGAT TCAGTTAGTAGTTTAGTTGCAAGGTAGTTATTGCACTGCTGTTGTTAACAGCTTACTGTTAAGATCTGTGAGATCTCTAA CACTGCTATATAACAGCCCTCTTGTACACACCGACTCAGGGCATGAATATTCAAAAAATTTACACAGTAAACTCATATTT TATAATTTTCATCACTTTACTCTCTCTTGCTTTCATAATGGTATCAAATCCGTTACTCTTTAATGATGGTGTTTCTCACA GAAGGTTGATATTGATCCGTGTTCTTGTTGTTCAGGTTCTCCGTCTCCTTGTTAAAGTATTTCAAAAGCTTTCTTCACCG GATTATCTGAGCATTTGTCAATGTCTCATGTTCTTGGATGAGCCAGAGGGTGTTGCAAGCATATTAGAAAGACTTTTACG TTCTGAAAACAAATATGATGCTCTTTTGGCATTTCAAATAGCTTTTGATTTGGTAGAGAATGAGCACCAAGCTTTTCTTC TAAGTGTCAGGGATCGTCTTGCATCACCGAAGTTACCTTCAGAATCTGCACAGCCAAAACCCAGTGATACAGGTTCTACT CCCAGTGCTAGTGCGAATGCACCAGATGATGTTCAGATGGAAGATGGTGATTCAGCTTCTATTGTCAATGTGCCTGAGGA TCCAAGTGAAAAAATGTATGCTGAGAGGTTAAACAAGATCAAGGGAATTTTGTCTGGGGAAACTTCAATTCAGTTGACCC TTCAGTTCCTTTACAGCCATAACAAGTGAGGCAATTTTTATTCGTCATATTTTTAGTACTTCATCATTTCTTTGTTGGTT TCAGTCTCCTTCAGGTAGTATGTTGGTTCTTATACTTGGGTGTAATATGCATTTAGATCTGATCTCCTTATTCTGAAGAC TATAAAGCAGTCTGTGGAGATGAGGAATAGCGTCTGCCACAGTGCTACAATATATGCCAATGCAATAATGCATGCTGGGA CAACTGTGGATACTTTCCTAAGGGAAAACTTGGTTAGTTATTATAGCTTACTTTTCTCCTTTCTCTCTACGCTGAATCCC TGTGCAGTTTAGGAATGGTTTCACTTATTAAGATTTCTATTCCTTGTAAATTTTAGGAATGGTTGAGCAGAGCTACTAAT TGGGCCAAATTCAGTGCAACGGCTGGTCTTGGTGTTATCCACAGAGGCCATTTGCAGCAGGGAAGGTCACTGATGGCACC GTACTTACCTCAGGGTGGAACTGGAGGTGGTGGTAGTCCATACTCAGAAGGCGGTGCTCTCTATGCCCTTGGTCTTATTC ATGCTAACCATGGAGAAGGCATCAAGCAATTTCTTCGTGATAGCCTGCGCAGTACTACCGTTGAGGTGCGCTTGTAAATA TTGATCACACTCCTTTTGTAAACAAAACAGCCTATTATTATTATATTTAATGCAACTTTTCTGACACAGGTTATTCAACA CGGTGCATGTCTTGGTCTTGGATTGGCATCCCTAGGAACTGCTGATGAGGATATTTATGAAGAAATTAAAAATGTTCTCT ACACTGATAGTGCTGTTGCTGGGGAAGCTGCTGGGATCAGTATGGGCCTACTCATGGTTGGAACAGGCAGTGAAAAGGCA AATGAGATGCTTACTTATGCACATGAGACACAGCATGAAAAAATTATCAGGTAAAGGTGTTGTTTCACACAGAAAGATGT TGAAACTGTGTCTTCTCTTGCATTAATATTGTTTTATGTTTCAGAGGGTTAGCATTGGGAATAGCTCTTACGGTTTATGG CAGAGAAGAAGGAGCTGACACATTGATTGAGCAGATGACTCGCGATCAGGATCCAATATTGCGTTATGGTGGGATGTACG CATTGGCCTTGGCATATAGCGGAACGGCAAATAATAAGGCCATTCGCCAGTTACTGCACTTTGCTGTGTCTGATGTGAGT GATGATGTCAGGAGGACCGCTGTTCTAGCATTGGGGTTTGTGTTGTACTCTGATCCAGAACAGGTTAGTTCTATCCTTTT TTAAACTTCCTCTTTGTTCTGAGTTGCACTTCAATGATTGTATTCCTTTTTTTTGGGTAATTTTGTCAAGATTTGTTATG CTAAATTCCTCCATCGCAGACTCCACGAATTGTTTCCCTCCTGTCAGAGTCTTACAATCCACATGTTCGATATGGAGCGG CTCTTGCTGTGGGTATTTCTTGTGCGGGTACAGGTCTCAGTGAGGCTATATCTTTACTGGAGCCATTGACATCAGATGTC GTTGATTTTGTTCGTCAAGGTGCCCTCATAGCAATGGCTATGGTCATGGTTCAGATCAGTGAAGCTAGTGATTCACGCGT TGGTACATTCAGGTAAAAATTCTCTATTTTGGCTCATCAAGGCAATATATTTGTTGTTTTGTGCCATGCGTTGTATTCTA ATCTGATGTGGCATGTATTCTAGGCGACAATTGGAGAAAATTATTCTGGACAAGCATGAGGATACCATGAGCAAAATGGG AGCAATTTTGGCCTCTGGAATCCTTGATGCTGGTGGAAGAAATGTGACCATAAGACTACTTTCCAAGACAAAGCATGATA AAATTACTGCAGTGGTTGGGCTTGCAGTTTTCAGCCAGTTTTGGTATTGGTACCCTCTTATCTATTTCATAAGCTTGTCC TTTTCACCCACGGCTTTGATTGGTCTGAACTATGATCTGAAATCTCCAAAGTTCGAGTTCTTGTCACATGCAAAGCCTTC TCTTTTTGAATACCCGAAACCTACTACAGTTCCCACTACTACTTCGACTGTAAAACTTCCCACAGCTGTTCTGTCAACAT CAGCTAAGGCCAAAGCCAGGGCTAAGAAAGCGGAAGAGCAGAAGGCTAATGCTGAAATTTCATCTAGTCCTGATTCTACA TCTGGTGCTCCAAGTGCTGGAAAAGGGAAGTCTTCCGTTGAGAAAGAAGGAGATACCATGCAGGTAATTTGTGAAGGCTT TCATTATATCCTTCTGGATTCATGCGTTCATTTATATCATTGTTAGAGGAGTAGAAAATTGAGAAGATAAGGGTGGGGTT CATAAATTTCATTAGGTTGCTTACAAGCATGCAATGCATGTGATTTGTTTTGGCTGCTAAGAGTATTCCTTGGTTTCTTC CTCGTCATTTAGTCTGGAGGATGGGTACGGTTACCTGTGCCTCAGATTCTTTGTTGCTATTTTTTTTTATTTGTATGAGG AATCTGGTGACTGGGTAGTTTTCATGACTTGCATTGCGTTAACATTTTATATAAGCATTAGTGATTGGTGATTACTGTTG TCTGTTCTTCCTATACCTGACTTGTTTATTGTACTTGAATTATTTCATCTGACTTGCCACATGACATGCATGTTTGAGAT AAAATATCTTATTTTTTTATTTGTATACTTGTGACATAACATTTCTAAATTTGTTCATGTTGAAGGTTGATAGCCCAACG GAAAAGAAACCAGAGCCTGAGCCTTCTTTTGAGATTCTGACAAATCCTGCTAGGGTTGTTCCTGCTCAGGAGAAGTTCAT CAAATTTTTACAGGATAGCAGATATGCTCCAGTTAAGTTGGCACCTTCAGGATTTGTGCTTCTCAAAGACCTGCGTCCTA CCGAGCCAGAAGTGCTCGCGATTACCGTCACACCCGCATCGGCCACTTCAACTGCTGCTGGATCAGCTGCTGGATTGCAA AGTTCTTCATCGGCAATGGCTGTGGACGAAGAACCTCAACCTCCTCAACCATTTGAGTACTCCTCATGA
CDS sequence (LotjaGi4g1v0459700.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTATGTATTGAACAGAGAGAGTTTGTATGAAGATGAGGAGTTTGATCAGCATCAAAGGCAACTTGCTGCGCTTGTCGT ATCTAAGGTCTTCTATTACTTGGGCGAACTTGATGATTCATTATCTTATGCCCTTGGAGCTGGTCCTCTTTTTGATGTTT CTGAGGATTCTGACTATGTGCACACTCTTCTTGTTAAAGCCATAGATGAATATGCTAGTCTCAAGTCTAAGGCAGCAGAA TCAGGTGATACATCTATCAAATCGGATCCAAGGTTGGAGGCGATTGTGGAGAGAATGTTTGATAAGTGTATCATGGATGG AAAGTACCAACAGGCCATGGGAACTGCCATTGAGTGCAGGAGGTTGGATAAACTAGAGGAAGCAATTACAAAGAGTGACA ACGTTCAAGGAACTCTATCATATTGCATTAATGTCTCTCATTCCTTTGTGAATCTTAGAGAATACAGACAGGAGGTTCTC CGTCTCCTTGTTAAAGTATTTCAAAAGCTTTCTTCACCGGATTATCTGAGCATTTGTCAATGTCTCATGTTCTTGGATGA GCCAGAGGGTGTTGCAAGCATATTAGAAAGACTTTTACGTTCTGAAAACAAATATGATGCTCTTTTGGCATTTCAAATAG CTTTTGATTTGGTAGAGAATGAGCACCAAGCTTTTCTTCTAAGTGTCAGGGATCGTCTTGCATCACCGAAGTTACCTTCA GAATCTGCACAGCCAAAACCCAGTGATACAGGTTCTACTCCCAGTGCTAGTGCGAATGCACCAGATGATGTTCAGATGGA AGATGGTGATTCAGCTTCTATTGTCAATGTGCCTGAGGATCCAAGTGAAAAAATGTATGCTGAGAGGTTAAACAAGATCA AGGGAATTTTGTCTGGGGAAACTTCAATTCAGTTGACCCTTCAGTTCCTTTACAGCCATAACAAATCTGATCTCCTTATT CTGAAGACTATAAAGCAGTCTGTGGAGATGAGGAATAGCGTCTGCCACAGTGCTACAATATATGCCAATGCAATAATGCA TGCTGGGACAACTGTGGATACTTTCCTAAGGGAAAACTTGGAATGGTTGAGCAGAGCTACTAATTGGGCCAAATTCAGTG CAACGGCTGGTCTTGGTGTTATCCACAGAGGCCATTTGCAGCAGGGAAGGTCACTGATGGCACCGTACTTACCTCAGGGT GGAACTGGAGGTGGTGGTAGTCCATACTCAGAAGGCGGTGCTCTCTATGCCCTTGGTCTTATTCATGCTAACCATGGAGA AGGCATCAAGCAATTTCTTCGTGATAGCCTGCGCAGTACTACCGTTGAGGTTATTCAACACGGTGCATGTCTTGGTCTTG GATTGGCATCCCTAGGAACTGCTGATGAGGATATTTATGAAGAAATTAAAAATGTTCTCTACACTGATAGTGCTGTTGCT GGGGAAGCTGCTGGGATCAGTATGGGCCTACTCATGGTTGGAACAGGCAGTGAAAAGGCAAATGAGATGCTTACTTATGC ACATGAGACACAGCATGAAAAAATTATCAGAGGGTTAGCATTGGGAATAGCTCTTACGGTTTATGGCAGAGAAGAAGGAG CTGACACATTGATTGAGCAGATGACTCGCGATCAGGATCCAATATTGCGTTATGGTGGGATGTACGCATTGGCCTTGGCA TATAGCGGAACGGCAAATAATAAGGCCATTCGCCAGTTACTGCACTTTGCTGTGTCTGATGTGAGTGATGATGTCAGGAG GACCGCTGTTCTAGCATTGGGGTTTGTGTTGTACTCTGATCCAGAACAGACTCCACGAATTGTTTCCCTCCTGTCAGAGT CTTACAATCCACATGTTCGATATGGAGCGGCTCTTGCTGTGGGTATTTCTTGTGCGGGTACAGGTCTCAGTGAGGCTATA TCTTTACTGGAGCCATTGACATCAGATGTCGTTGATTTTGTTCGTCAAGGTGCCCTCATAGCAATGGCTATGGTCATGGT TCAGATCAGTGAAGCTAGTGATTCACGCGTTGGTACATTCAGGCGACAATTGGAGAAAATTATTCTGGACAAGCATGAGG ATACCATGAGCAAAATGGGAGCAATTTTGGCCTCTGGAATCCTTGATGCTGGTGGAAGAAATGTGACCATAAGACTACTT TCCAAGACAAAGCATGATAAAATTACTGCAGTGGTTGGGCTTGCAGTTTTCAGCCAGTTTTGGTATTGGTACCCTCTTAT CTATTTCATAAGCTTGTCCTTTTCACCCACGGCTTTGATTGGTCTGAACTATGATCTGAAATCTCCAAAGTTCGAGTTCT TGTCACATGCAAAGCCTTCTCTTTTTGAATACCCGAAACCTACTACAGTTCCCACTACTACTTCGACTGTAAAACTTCCC ACAGCTGTTCTGTCAACATCAGCTAAGGCCAAAGCCAGGGCTAAGAAAGCGGAAGAGCAGAAGGCTAATGCTGAAATTTC ATCTAGTCCTGATTCTACATCTGGTGCTCCAAGTGCTGGAAAAGGGAAGTCTTCCGTTGAGAAAGAAGGAGATACCATGC AGGTAATTTGTGAAGGCTTTCATTTCTGGAGGATGGGTTGA
Protein sequence (LotjaGi4g1v0459700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MYVLNRESLYEDEEFDQHQRQLAALVVSKVFYYLGELDDSLSYALGAGPLFDVSEDSDYVHTLLVKAIDEYASLKSKAAE SGDTSIKSDPRLEAIVERMFDKCIMDGKYQQAMGTAIECRRLDKLEEAITKSDNVQGTLSYCINVSHSFVNLREYRQEVL RLLVKVFQKLSSPDYLSICQCLMFLDEPEGVASILERLLRSENKYDALLAFQIAFDLVENEHQAFLLSVRDRLASPKLPS ESAQPKPSDTGSTPSASANAPDDVQMEDGDSASIVNVPEDPSEKMYAERLNKIKGILSGETSIQLTLQFLYSHNKSDLLI LKTIKQSVEMRNSVCHSATIYANAIMHAGTTVDTFLRENLEWLSRATNWAKFSATAGLGVIHRGHLQQGRSLMAPYLPQG GTGGGGSPYSEGGALYALGLIHANHGEGIKQFLRDSLRSTTVEVIQHGACLGLGLASLGTADEDIYEEIKNVLYTDSAVA GEAAGISMGLLMVGTGSEKANEMLTYAHETQHEKIIRGLALGIALTVYGREEGADTLIEQMTRDQDPILRYGGMYALALA YSGTANNKAIRQLLHFAVSDVSDDVRRTAVLALGFVLYSDPEQTPRIVSLLSESYNPHVRYGAALAVGISCAGTGLSEAI SLLEPLTSDVVDFVRQGALIAMAMVMVQISEASDSRVGTFRRQLEKIILDKHEDTMSKMGAILASGILDAGGRNVTIRLL SKTKHDKITAVVGLAVFSQFWYWYPLIYFISLSFSPTALIGLNYDLKSPKFEFLSHAKPSLFEYPKPTTVPTTTSTVKLP TAVLSTSAKAKARAKKAEEQKANAEISSSPDSTSGAPSAGKGKSSVEKEGDTMQVICEGFHFWRMG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 740 | 740 | - | – | |
| PIRSF | 2 | 856 | 855 | 0.0 | ||
| PANTHER | 6 | 835 | 830 | 0.0 | – | |
| PANTHER | 6 | 835 | 830 | 0.0 | – | |
| SUPERFAMILY | 18 | 707 | 690 | 2.18E-31 | ||
| MobiDBLite | 236 | 277 | 42 | - | – | |
| MobiDBLite | 241 | 260 | 20 | - | – | |
| Gene3D | 315 | 757 | 443 | 1.0E-202 | ||
| Pfam | 448 | 481 | 34 | 1.3E-5 | ||
| Pfam | 571 | 663 | 93 | 3.5E-13 | – | |
| TMHMM | 740 | 762 | 23 | - | – | |
| Phobius | 741 | 762 | 22 | - | – | |
| Pfam | 757 | 834 | 78 | 8.0E-24 | ||
| Phobius | 763 | 866 | 104 | - | – | |
| Coils | 807 | 827 | 21 | - | – | |
| MobiDBLite | 814 | 850 | 37 | - | – | |
| MobiDBLite | 823 | 840 | 18 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Proteasome complex | A large multisubunit complex which catalyzes protein degradation, found in eukaryotes, archaea and some bacteria. In eukaryotes, this complex consists of the barrel shaped proteasome core complex and one or two associated proteins or complexes that act in regulating entry into or exit from the core. | ||
| Molecular function | Enzyme regulator activity | Binds to and modulates the activity of an enzyme. | ||
| Biological process | Regulation of protein catabolic process | Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds. |
Expression pattern of LotjaGi4g1v0459700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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