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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0462200 |
| Transcript ID | LotjaGi4g1v0462200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Guanine nucleotide-binding protein subunit beta-like protein; TAIR: AT1G48630.1 receptor for activated C kinase 1B; Swiss-Prot: sp|Q39836|GBLP_SOYBN Guanine nucleotide-binding protein subunit beta-like protein; TrEMBL-Plants: tr|A0A151TK95|A0A151TK95_CAJCA Guanine nucleotide-binding protein subunit beta-like protein; Found in the gene: LotjaGi4g1v0462200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:83269757..83272316) extracted from Lotus japonicus Gifu genome v1.2.
CTTTTTTGATTTTTTCCAATCTGTGGATCTGTAGCGTGAGCCTGTTAAAAGATGAGATTGGGCCTAAAGACAAATAAAAA AAAAAAAAAAAATCCCCAAAACCCTAATTTGTGTTGAGCACTATATATACGTCTTGTTGAGCAGAGAAACCTCCTATCGC ATTTCTGCTCTCAGCCTCGCAGCACAAACCCTAGAGAGTGAGTCTCCCAAACAGAGAAGAGAAAAATGGCTGAGGGTCTT GTTCTCCGCGGCACCATGCGCGCTCACACCGATCAGGTCACCGCCATTGCCACCCCGATCGACAATTCCGACATGATCGT CACCGCCTCCCGTGACAAATCCATCATCCTCTGGCACCTTACCAAGGAGGACAAGACCTACGGTGTCCCCCGCCGCCGCC TCACCGGTCACTCCCACTTTGTTCAGGACGTTGTCCTCTCATCTGATGGCCAGTTCGCCCTCTCCGGCTCATGGGACGGT GAGCTCCGCCTCTGGGACCTTGCTGCCGGCACCTCCGCCCGCCGCTTCGTCGGTCACACCAAGGACGTCCTCTCCGTCGC TTTCTCCATTGACAACCGTCAGATCGTGTCCGCCTCCCGCGACCGCACCATCAAGCTGTGGAACACCCTCGGTGAGTGCA AGTACACCATTCAGGACAACGACGCTCACTCCGATTGGGTCAGCTGTGTGAGATTCAGCCCCAGCACCCTTCAGCCAACC ATCGTTTCCGCTTCCTGGGACCGAACCGTCAAGGTGTGGAACTTGACCAACTGCAAGCTGAGAAACACCCTTGCTGGACA CTCTGGATATGTCAACACCGTTGCTGTTTCCCCTGATGGTTCCCTCTGCGCCAGTGGTGGCAAAGATGGAGTCATCCTTC TCTGGGATTTGGCTGAGGGTAAGAGGCTTTACTCTCTTGATGCTGGTTCTATCATCCATGCCCTCTGCTTTAGTCCCAAC AGGTACTGGCTCTGCGCTGCCACTGAGACCAGCATTAAGATCTGGGATTTGGAGAGCAAGAGCATCGTTGAGGATTTGAA GGTGGACTTGAAGACTGAAGCTGATGCTACCACTGGTGGTAACACCAACAAGAAGAAGGTTGGTTTTCTTAATCTGGGAT TATTAGTAACATTTTTATTCATTGTGTTCTGTCAGACTGATTTGGTGATTTTACTTTATTGAATTATTGATCTAAATGCA TACGAGTCACATGCTGTTGATATCATCAATTTATTTTTGCTGTGAAGTTTTGACAATTGTTTAAGCTTTGTTGAAGTAGT TTATACGAAATTGTATGCTTGTTATGTAGTTTAGCTAGGATTTTTCTTTGCCTTTCAGATAGTGTATGCAATTTTTCATT GAAATGTGGCTTTGTTTCCAGTTGCATTGTCCTTTTTGAAAAGCTGTAGTTTTAGTCTTACTTATTTGGTGAATGATAAT GAACTTCTAGCTGGTTTGGTCCTGCTTTTGGGAATAGCTGATGTGTGGCTTTGTGGTTACTTTGCTCAATATGAATATCG TGTTTAGAACCCTCCAATCTAAACACGATATTCATATTTGTATCCTATTATCTTGATTGCCAGGTTCTGTTTTTTTGCAA TCTAAAAAGCACTTTATTATGTTACTTTACACTGAGCAAATAACACTTAATTGAATTCTCTTAGGGTATTTGTTTGAGAT TCTTCTGTGCTCTTTGTTCCCTATCTAAAATGGTTCATTGTAGGAATATGGTATGTTAGTCTTACATTGTATGGTATTTT ATTCATTTATGTTTGCATTTCCATTGCAGGTTATCTACTGCACCAGCTTGAACTGGAGTGCAGATGGAAGCACTTTGTTC AGTGGCTATACTGATGGAGTGATCAGAGTTTGGGCTATTGGTCGTTATTAGTAAAGCTTCTCAGTAATTTCATGTCAGAA TTTGTTTCCAATTTTTGTTTTGATCCGAGACAAAGCTAGTTATCCGTTTTACAGTAGAATCATTTTGTTTTAAGACAAGT GGCTTTGTGGCCGTTTTTATTTAACTTGAAACGTTTGCTTCGGTTCTTATGATATGCATATTTCAACATTGTGGTTTGGT TCTTCTCCCTTTTACGAGCATAATCTTCGAGCATGGTTGAAATAATACATTTGAGAATCTACTAGTTTTTTTTTTCTTTT AAAAATGAAATGTAATGACATGAGATTATTAATCATAATTTCATTTGTGACATTATCCCATTCATAAATGTTTTGTCCCT TAAATTTTATGTTAGAGATTGGGCTTTGATTTTCAATGTTCCATCTTGATCCCCTTTTTAAAACCAAGTCATTTCCGATC TCTGCTCCAACTTTTTAATTTACTGGCAAATCTATAATTTTGTGAGGCTTATGTGGGCTAGTTAAAATATGTAAATTGAA AACCTTAATCCGGAGTTTAAGAAAAATGCTACAGTCAGTGTTCGGGTAATCATGATAATTTTTTCATAATTGCATATTTT ATCGGTGCATTATATACTTTATATGGTAGATCGATTTAGTGGATGTTTTGGTTATGAGTTGCAATATTTTCTTGACATAT
CDS sequence (LotjaGi4g1v0462200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGAGGGTCTTGTTCTCCGCGGCACCATGCGCGCTCACACCGATCAGGTCACCGCCATTGCCACCCCGATCGACAA TTCCGACATGATCGTCACCGCCTCCCGTGACAAATCCATCATCCTCTGGCACCTTACCAAGGAGGACAAGACCTACGGTG TCCCCCGCCGCCGCCTCACCGGTCACTCCCACTTTGTTCAGGACGTTGTCCTCTCATCTGATGGCCAGTTCGCCCTCTCC GGCTCATGGGACGGTGAGCTCCGCCTCTGGGACCTTGCTGCCGGCACCTCCGCCCGCCGCTTCGTCGGTCACACCAAGGA CGTCCTCTCCGTCGCTTTCTCCATTGACAACCGTCAGATCGTGTCCGCCTCCCGCGACCGCACCATCAAGCTGTGGAACA CCCTCGGTGAGTGCAAGTACACCATTCAGGACAACGACGCTCACTCCGATTGGGTCAGCTGTGTGAGATTCAGCCCCAGC ACCCTTCAGCCAACCATCGTTTCCGCTTCCTGGGACCGAACCGTCAAGGTGTGGAACTTGACCAACTGCAAGCTGAGAAA CACCCTTGCTGGACACTCTGGATATGTCAACACCGTTGCTGTTTCCCCTGATGGTTCCCTCTGCGCCAGTGGTGGCAAAG ATGGAGTCATCCTTCTCTGGGATTTGGCTGAGGGTAAGAGGCTTTACTCTCTTGATGCTGGTTCTATCATCCATGCCCTC TGCTTTAGTCCCAACAGGTACTGGCTCTGCGCTGCCACTGAGACCAGCATTAAGATCTGGGATTTGGAGAGCAAGAGCAT CGTTGAGGATTTGAAGGTGGACTTGAAGACTGAAGCTGATGCTACCACTGGTGGTAACACCAACAAGAAGAAGGTTATCT ACTGCACCAGCTTGAACTGGAGTGCAGATGGAAGCACTTTGTTCAGTGGCTATACTGATGGAGTGATCAGAGTTTGGGCT ATTGGTCGTTATTAG
Protein sequence (LotjaGi4g1v0462200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAEGLVLRGTMRAHTDQVTAIATPIDNSDMIVTASRDKSIILWHLTKEDKTYGVPRRRLTGHSHFVQDVVLSSDGQFALS GSWDGELRLWDLAAGTSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQDNDAHSDWVSCVRFSPS TLQPTIVSASWDRTVKVWNLTNCKLRNTLAGHSGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGSIIHAL CFSPNRYWLCAATETSIKIWDLESKSIVEDLKVDLKTEADATTGGNTNKKKVIYCTSLNWSADGSTLFSGYTDGVIRVWA IGRY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 324 | 324 | 8.1E-211 | – | |
| PANTHER | 1 | 324 | 324 | 8.1E-211 | – | |
| Gene3D | 4 | 324 | 321 | 7.6E-135 | ||
| SMART | 4 | 44 | 41 | 3.3E-4 | ||
| SUPERFAMILY | 5 | 319 | 315 | 2.2E-72 | ||
| CDD | 7 | 320 | 314 | 2.15157E-86 | – | |
| Pfam | 9 | 43 | 35 | 0.021 | ||
| ProSiteProfiles | 11 | 53 | 43 | 10.909 | ||
| ProSiteProfiles | 11 | 324 | 314 | 52.361 | ||
| SMART | 52 | 91 | 40 | 1.7E-6 | ||
| Pfam | 55 | 91 | 37 | 3.7E-7 | ||
| ProSiteProfiles | 59 | 100 | 42 | 14.886 | ||
| ProSitePatterns | 78 | 92 | 15 | - | ||
| SMART | 94 | 133 | 40 | 7.7E-9 | ||
| Pfam | 99 | 133 | 35 | 6.6E-7 | ||
| ProSiteProfiles | 101 | 133 | 33 | 14.786 | ||
| PRINTS | 120 | 134 | 15 | 1.6E-8 | ||
| ProSitePatterns | 120 | 134 | 15 | - | ||
| SMART | 135 | 179 | 45 | 3.5E-8 | ||
| Pfam | 140 | 179 | 40 | 2.4E-5 | ||
| ProSiteProfiles | 145 | 188 | 44 | 12.848 | ||
| PRINTS | 166 | 180 | 15 | 1.6E-8 | ||
| ProSitePatterns | 166 | 180 | 15 | - | ||
| SMART | 182 | 221 | 40 | 1.2E-10 | ||
| Pfam | 186 | 221 | 36 | 1.6E-7 | ||
| ProSiteProfiles | 189 | 230 | 42 | 16.557 | ||
| ProSitePatterns | 208 | 222 | 15 | - | ||
| PRINTS | 208 | 222 | 15 | 1.6E-8 | ||
| SMART | 224 | 261 | 38 | 0.13 | ||
| Pfam | 235 | 261 | 27 | 7.3E-4 | ||
| SMART | 276 | 320 | 45 | 0.045 | ||
| Pfam | 293 | 319 | 27 | 0.0015 | ||
| ProSiteProfiles | 296 | 324 | 29 | 10.174 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi4g1v0462200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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