Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0006900 |
| Transcript ID | LotjaGi5g1v0006900.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Chaperone protein dnaJ; TAIR: AT1G75690.1 DnaJ/Hsp40 cysteine-rich domain superfamily protein; Swiss-Prot: sp|Q8GSJ6|LQY1_ARATH Protein disulfide-isomerase LQY1, chloroplastic; TrEMBL-Plants: tr|I3S1G6|I3S1G6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0006900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:1539848..1542623) extracted from Lotus japonicus Gifu genome v1.2.
TCACAATGAAGTTGCCACGTGGAAGATGGAACCTTAACCAAGTGGTCGTTATTGCAGCTTGGATGATGTCCACTGCTGCT AGTTTTTGGATTTTCACTTCACTTCTCATTCTGAAAGAAGAATCATTTTCAGTTCTTCAGATAGGAACAACTTAGTAGAA CTGAAGGGAAGTGAGAAATGACACTTGCTCCTTCTCTTTCTCTCCCTCACTTCCATTCCTCATTTCTCTGTTGCCCTCTC AAACAACCCTTCTCTCCCTCTTCTAGAAATAGAATTCAACCAAAACCCACATCTTATCCACGCATTAGAGCTCTAGAGTT TGATCAAAACACGGTTCTTTCTCCTATTTCTTCTCTATTGATTCATCTATATTTATATATATCAAGAAAAAATATGGTAT CTTTATTATCTTTAGTAGTTAGTTATTACATTGTGACTGTTTTTCAGGTAATTGCTATAACTGTTGGTGTTGCAAGTGTG GCTATTGGGATTGGCATTCCAGTGTTCTATGAATCCCAAATTGATAATGCTGTGTGTGAAGTGTTTTTTACTATCACTTT CATTGAATTATTATGTTATCTAAATTGATATTTTCTAAATAATGTGCACCTTTCTTTTTGTTGCAGGCTAAGCGAGATAA CACTCAGCCCTGCTTCCCATGCAGTGGATCTGGTGCTCGTAAGTATTATACTTTTTACCTTCCTTTTCTACCATGTTTGG ATCAGCTTCTCTTTCATTTCTGAAAACTATAAGCTGTATGAGTTTCTTACCAGGAATTGATTCTAGGTTCAGAATCAATT ATAGAAGGGTTTCCAAACCTTCACTTCATCACACTCCATAATTGATACTTGGACTCCATTAGGCACCATTTTCTGGGGTA GCATTACTAAGGCAGGGTCACAAAGCAGTTTGGAGTAGTTGTAGTTGTAAAGGAGGTTCAGGTATTCAATGGCAAAGGGT CTCGAATTGATTACCTCTCACTAACACTATTTTTCACACTATCAATCAGTATTTGTTCCAACTTCCAACTAGCCAAAATC TATCTGAATATCTGATACATTGCCCTCAATTCCAAAAGTAATAGTTTGTATGAATTTCCTTTTTTGATGAATTTTTTATG ATACTTATGAGGATGTGAGATTTGACCTGTTTACATAGAACTTCACATTAGGTTGTAAATTTACTTAGTTCAGCTCCGCA TAGTGAAAGCATAGTTGCTTATGAATTTGTAGTATCGGGTCATTACTATCTCCTTACGATGTCTCTTTTATATCCTTATG TGGTGAATAGACTAAGGGTGTGTTTGTGCAAACAACTTAATGAACCACTTATCATAAGCTAATTTGAGAAGCTTACTGAA AGAAGCTCAAAATATGTTAGATAGGTGTAAGTGCTTCTTCATAAGCAATATGGCAGCTTTTGAAAGTAAGTTTAAAACAA CTTATATGTAGGTCATAAGATATTTATATAAGCTCTCTCGAACACTTGCATAAGCGCTTATACTATAAGATAAGCTCAAA TAAACTCTTCCAAACATTACCTAAATCTCATCGACACTTTGTCTTACACAAGTTGCTTAAGTTTTCATGAGTGAGTCTGT TTGAGGAAACTTACAATTAATCATGGTACAATTTAAGAATTGAAAAGGGAAACATTTTAACTGTACTGATAAGAGAAGAA TTCACTACATTAGTTAGGACAATGTAACATGCTAGTCCATATATTCACCACTTTAAACAACTTGCCACTGTAAAGGCCAA TTCAATTGTTTGATAATCTTATGTTTGAAAGTGTTACCCTTTAACCAGAGAAATGCAGATTTTGCTTGGGAACTGGCAAT GTGACAGTCGAACTTGGTGGGGATGAAAAGGAAGTCTCTCGATGCATAAATTGTGACGGCGCTGGCTCACTGACATGTAC CACTTGTCAAGGATCGGGAATTCAACCTCGTTACCTTGATCGTAGGTACGGTGTTCTGCAATCTGATAGATATCCCCCCC CCCCCCCCCCCCCAATGTCATTTTCTAATGAAAAAGTTTAGTGATTATCCCAAACCATGATTTTGTCAGCCAGTATTTAA TTAATTCACAATAACAATAAGCCTACAGGGATTGGTTCAGCATGAAAGAGGCTAAAAGGATTAGTGATATTGAGGAACCT TAAATAAATGACTCATACAAGTTTCTTCAACATAACTTAAGCATTCCCTTGGTTTGGTTAACATATTTTGTAGTGAACTA AAATCATTAATAACTACTGGCAATAAAATGATGGTACTTAGAAAACGGTCTTTATGTCTTTGCTGTTGTATTGTTAATCA TAAATCTGTGTTTCATATTCATCAGAGAATTCAAAGATGATGATTGAGGCGAGTTGAAAATAAGCGGCGGTGATTTGGCA TTCAATGGCGAGGATAATTTACTCATTTAATTTCAATAGTCTCTGTACACATGTAATCCAACAGTCAAAATTGTGTTGAT GCTTTCATATGATTTACATTTTAACCTGTGATGTTAGGCTACTCTCTTCCATGAGCTATCTGTGTAAAGTTTTGGCGTTT CTGGTCATTTTTTTATTCAATTATTCAATGTCCTTTTGTAAATGTTGGATTTTGTTGTGTTTATGGCCTTAGGACTTGAC AACTATGCTCAAATTATTATAACTGGTGTTATTTCTGTTTCTATTGAATGAACTGTTTCTGGGAATTGACTCTTAAATAA TGGATATAGTAGTAGGCTATGGTGAAGCAGTATTCTATAGGTTCAAAATTGTTAAA
CDS sequence (LotjaGi5g1v0006900.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACACTTGCTCCTTCTCTTTCTCTCCCTCACTTCCATTCCTCATTTCTCTGTTGCCCTCTCAAACAACCCTTCTCTCC CTCTTCTAGAAATAGAATTCAACCAAAACCCACATCTTATCCACGCATTAGAGCTCTAGAGTTTGATCAAAACACGGTTC TTTCTCCTATTTCTTCTCTATTGATTCATCTATATTTATATATATCAAGAAAAAATATGGTATCTTTATTATCTTTAGTA GTTAGTTATTACATTGTGACTGTTTTTCAGGTAATTGCTATAACTGTTGGTGTTGCAAGTGTGGCTATTGGGATTGGCAT TCCAGTGTTCTATGAATCCCAAATTGATAATGCTGCTAAGCGAGATAACACTCAGCCCTGCTTCCCATGCAGTGGATCTG GTGCTCAGAAATGCAGATTTTGCTTGGGAACTGGCAATGTGACAGTCGAACTTGGTGGGGATGAAAAGGAAGTCTCTCGA TGCATAAATTGTGACGGCGCTGGCTCACTGACATGTACCACTTGTCAAGGATCGGGAATTCAACCTCGTTACCTTGATCG TAGAGAATTCAAAGATGATGATTGA
Protein sequence (LotjaGi5g1v0006900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTLAPSLSLPHFHSSFLCCPLKQPFSPSSRNRIQPKPTSYPRIRALEFDQNTVLSPISSLLIHLYLYISRKNMVSLLSLV VSYYIVTVFQVIAITVGVASVAIGIGIPVFYESQIDNAAKRDNTQPCFPCSGSGAQKCRFCLGTGNVTVELGGDEKEVSR CINCDGAGSLTCTTCQGSGIQPRYLDRREFKDDD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 51 | 51 | - | – | |
| PANTHER | 4 | 194 | 191 | 5.7E-70 | – | |
| PANTHER | 4 | 194 | 191 | 5.7E-70 | – | |
| Phobius | 52 | 69 | 18 | - | – | |
| Phobius | 70 | 80 | 11 | - | – | |
| Phobius | 81 | 111 | 31 | - | – | |
| TMHMM | 89 | 111 | 23 | - | – | |
| Phobius | 112 | 194 | 83 | - | – | |
| SUPERFAMILY | 125 | 180 | 56 | 1.7E-6 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0006900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…