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LotjaGi5g1v0024900.1

Overview

Field Value
Gene ID LotjaGi5g1v0024900
Transcript ID LotjaGi5g1v0024900.1
Lotus japonicus genome version Gifu v1.2
Description Non-symbiotic hemoglobin 1; TAIR: AT3G10520.1 hemoglobin 2; Swiss-Prot: sp|Q9FEP8|LGB_LOTJA Leghemoglobin; TrEMBL-Plants: tr|Q3C1F6|Q3C1F6_LOTJA Leghemoglobin; Found in the gene: LotjaGi5g1v0024900
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr5:4310694..4316382) extracted from Lotus japonicus Gifu genome v1.2.

GTAAGTGTAAAAGTCTGGTATGACAAACAATGGTGCAATCCCATTTCAAATAATACAGCTTTTCAAAAGAGGCATAATAT TTATATGATTAAATTTACAACTATTTTAGTTAATTGAAAAGTCATTTTGATTAAGTTTTTGAAAAGTTTATTGTCTCTTA ATAAAACCAATGGCCAGCCATCCACCGATGCAGAAATTTTCCAATTAATCACGATCACCAGGAATCAAACTCCATCAAGC TATTTGCACTCTCCAAGTCTCCTATATATACATTTATTGGATGTGAAGTTGTATCATCGGAGGACACAAATAACAAAAAG GAAACAAAAAAGAAAAATGGGTTTCACTGCACAGCAAGATGCTTTAGTGGGTAGCTCATATGAAGCATTCAAGCAAAACC TTCCTAGCAATAGTGTTCTGTTCTACACCTTGTAAGTCCTATCTCTCAGTGTGTCTTTGATTTATGTGTTTTCTCTTTTT GTTGTTTTGTTGTGTGTTGGAAACAAATGATGTAAATTAATGTGACCTCCTTTAATCTTGATTTGATTAAAAAAAGAATA TTGGAAAAAGCCCCAGCTGCTAAAGACATGTTCTCCTTTCTAAAGGCTTCTGGACCCACGCACAGTCCTCAACTCCAAGC CCATGCTGAAAAGGTTTTTGGACTGGTAAGTGAAATCTAGCATAAAATTGTATTCTGTTTACATTCTTCTATCAGTTCTA TGAATGCCAGTGTACTATTATGCTATATTTTTTGAATCATAGACACGCGACGCGGCTGCTCAACTCTTAGCAAAAGGAGA AGTGACACTTGCAGATGCCAGCTTAGGTGCTGTTCATGTTCAGAAAGCAGTTGCTGACCCCCATTTCGCGGTAAAAATTT AAGAGATATGCATTCCTAAATTTAACAGATACCTATAACACTTGTTTAGAAAGATCTGTTACCGGTAGGATTTGAACCCT GGACTTAGGAAGTTTTGACCCATCAAGTTCCAATTAGGCCATCCTACCAGTACCTATAACACTTGTTAGTTGTTACATAA TGCTATTATTGTTTTGCAGGTGGTTAAAGAAGCACTGCTTAAAACAGTACAGGCAGCAGTTGGGGACAAATGGAGTGAGG AATTGAGCACTGCTTGGGGAGTAGCCTATGATGGACTCGCAGCTGCAATTAAGAAGGCAATGAGCTGAAGTTGAAATTTA TAGCCATAATGGCATAAATAGTTTTAATAATAAAAATAATATGTACTCCAATAAAACTTATTACAAATAAATTCAAATAC GTTGAATATAAATTTATCTATTCAATTAAAGATGTTTCTGGTTTCGCATGGCATTTTTTCTAATTTTTAGGTAGAATACT TGAGGAGACATCTATTTTATATATGGGGTTTTTGTTTACCACATAGGATTATAATAGGGATAGCACCCATGCGGATCAGG AAGTAGTGTGGAAAAAATTAGACTGAGCTTTGCATAAATAGAATTAATGACCTGCTTAAACAAATCAAGCCTTGGGTCTG CCATATTTGTCATATGCTTTTTTCTAGGCCTAACCTGACCTTGAAAGTTTAGTCCCGGCCTGTTATCCTGTTTAATTGTA TGTTCCATAATAAGAAAACTAAGTAAATTGATAAATCTATGTGTAAATAGGCTAAGAAGCTTATAGGCTAATGGACTGAA ATATATTAAAACAAAACTATCTATAAATTGTCCAAATGACTTTATCGTGCAAATTGTCCAAACCCCTCACTACTAGCTCA GTTCTAATGGCTCTTGATACAATTGGTGCGGAGACAAACTTTTCTAGAAAGCAAATAAAGGTTACCTAATTCCATAACTC AGATAGCAAGTCCGTGGATCCCAAAAGATAATAACCAATATGAACATTATGCAGGCTGACATAGGCAGAAGTTCTTGGCA CTCTAAAATAATAACAATAAAGAGAGCTGCTTATTTCAATAACCACATTTTTCTTTTTCCCTGGGAGAGTCTCTTGTTTC TATTTGGTAGTTTAATTTCAAAGAATCAATTGGAACACGACACCCCTGCCATTTTCTTTACACTTTTCAAACTAATTCTA GAAAACTAGGAGAGTTGCTTCTTAAACCAAGCTCAACGTGTTCAAACATGTATCAAGAAGGTAAAATATAGATATTAACA TTGTAAACTAACCTGCTGGACATGTTTCCTTCACTAGCTGGCCAAGGTGGAGTTTACTTTGGTCCTATGCTGATTGTGCA TTAGCTTGTAAGCAGCTATACCATTAGACCATCAAATAAGGAAACAGATCAATATGGCTCTTGTCTCTCCCTGCACAGCC TCTGCAATTCTCTGCTCTGCATATGTAGTGAAGACCTAAAACCACATTCAACAAATTGTTTCATGATCAGAGTATTAATT TTGCTTTAAAATACCACAAAACAAATCAGTTGACAAAGCCAAAATCTATTCTTGAGAGAAGTGTATTTGGCTGAATTTCT CATTGTTATTGAATTCAGAAGTGTTTCTACTTATATACCCATAGCTACAAAGAGAGAGAAAAAATAACAAAACTGCTAAC AACCTCTAACTAACTCTAACAGCCTCTAACTAACTCTAACAACCTCCAACTAACTAACTGACTATATTCTGCATAATTAA CTATTAGTCCTCTAATTTAACTATATTTCCAATACCCTCCCTCAAGCTTAGACATACAAATTTTTGAGACTAAGCTTGGA CAATAACAGCTGAAACTGAGGAGCAGGGAGAGCTTTAGTATGGAGATCTGCAAGTTGTGCAGTTGTCGGGATAGGCATGA GTTTGAGGATGCCTTGTTGAATCTTGTCTCTCACCAAGTGACAATCAATCTCAATATGTTTTGTTCGCTCATGAAAGGTT GGATTTTGGGCAATATGAATGGCTGAGAGATTGTCACAGAACAAAGCTACTGGAGTCACCATAGGCTGATGAAGATCTGC CAATAAGTATATCAACCACTGAATTTCACAAGCTGTAGTAGCAATGGCACGATACTCAGCTTCGGAGGATGACCTGGAGA CTGTGCTTTGTTTCTTTGATTTCCAACTAATCAATGAGGAACCATAAAACAGATTGTACCCTGTGACTGATCTTCTGGTG TCAACGCAGGAGGCCCAATCTGAATCACAAAAACCTGTGATTTTATGTGTGGAGCTAGCTGAAAAGAATAACCCCTGACC AGGTTGTTGTTTGAGATAGCGTAAGACTCGAAGTGCAGCATCATGGTGTTCCTTCATTGGCTTGGAGAGGAACTGACTCA ATGTACTCACAGCAAAGCACAAGTCAGGTCTTGTATTGGTGAGATATAGAAGTCGACCTATAAGCCTTCTATAGGCAGAA ACATCCGGAAATGGATTATCGGTTTGTGCTGTGAACTTGGTGCCTGGAATCACTGGTGTTGTGACTGGTTGACAGACCAA TAAACCTGCCTCCTCTATTAATTCCAAGGCATATTTTCTCTGAGAAAGAACTAACCCTTGCTTGGATCGGGCCACCTCAA AACCAAGGAAATATCTGAGATCTCCTAAATCCTTGATTTTGAATTGAGTGTCGAGAAATTGCTTGACCTTAGTAATTTCC TGCAAGTCATCACCAGTCAGAACAATATCATCAACATACACAAGAAGAATGGTGAGATGGCCATCAGTGTGTTTGACAAA CAAAGAATAATCACTCTTGGATTGCTTGTATCCCAAGGAAATCAGGGAAGTAGTCAACTTGTAGTTCCATTGTCTGCTTG CTTGTTTCAAACCATATAAGGATTTGATGAGTCTGCAGACCTGAGTAGAACGAGTTGTTTGATAGCCAGGGGGAGGCAAC ATGTAAACCTCTTCATCCAAATTACCATGCAAAAAAGCATTATTTACATCCAATTGCTTCAAGTACCAATTATTTGAAGC TGCCAGGGCAAGAACCAATCTCACAGTAGTCATTTTAACAACTGGAGAAAAAGTTTCAAAGTAATCCAAACCCTCCTGCT GTGTGTAGCCTTTGGCGACTAACCGAGCCTTAAAACGTTCAATGCTACCATCTGCATGCCGCTTGATCTTATATACCCAT TTGCACCCAATAGGATGCTTGCCAGGAGGTAAGTCAGTCAATTCCCAAGTATGTTTTTTCTCGAGAGCTGCAATTTCAAG GTCCATAGCCTCCCTCCAACATTCCTCTTTCACAGCTTGGTTATAAGTTGTAGGTTCAACAAGTGTAGAACAAGAGAGAA CAAAAGATTGATATGTAGGAGAAAGAGAAGAGTAGGATAAAAAATCAGAGAGAGGATAATGTGTACCAGATGATTGAGAA ACCTGAGATGTAGTATGGACCAAATTGCAATGGTAATCCTGTAAGTAAGAAGGTTTTGTCTTGGGTCTGGCAGACTGTCT TACTAAGGGCAGAGGGGGAGAAACGGGGGGTGGAGGAGGAAGAGGAGTGTGTGTATTTGAGACATTTGGTGGTATAGGAT CAGTGGTAGAGGAATTAATGTCAGTGGGTAAGGACAAGGAATTAAGGGTAGAAGTGTATGATTCAGTGCCACTGCCATGA AATGGGAAAATGTTCTCATAGAAAATAACATTTCTAGAGAGAAAAATCTCTCGATTTTGCAAATCTAAAAGAAGATAACC TTTGACCCCGTCCTTGTAACCAAGTAAGACACACTTTCTAGCCCTTGGTTCAAATTTAGTTCTGTGTGCCTTAATGGTAG TTGCATAACATAGGGAACCAAAAACTCTTAATTGAGCTAAGTCAGGTTGAATGTTATGCAAAACCATAAATGGTGTTTTG AAAGATAAAACCTTTGAAGGTAAAAAATTGATCAAGTACACAGCATGCAAAACAGCAAAGGACCAAAACTGAATTGATAG TTTAGATTGGAACATCAAGGCACGAGCTACATTTAGAATGTGCTGATGTTTCCTTTCTACTACCCCATTTTGCTGTGGAG TCTCTACACATGTTAACTGATGTTGAATACCATGTTGTGTGTAAAAATCTGGCATGCTAAATTCAACACCATTATCAGTC CTTATGGTTTTAACCTGTGTATTAAACTGTTTTTGTGCAAAGATAATAAATTTTTGAAGAGTGATTCGAGCCTCAGACTT TGATTTCATCAACTTAATCCATGTAAATCGAGACTTGTCATCAACTATAGTAAGAAAATACTTTGCACCAGTTACAGAAG CATGACTATAAGGACCCCAAATATCCACATGTAATAGAGCTAATACATTGACAGAAACAGTGTGACTTAATGAAAATGAC AATCTTTTTTGTTTAGCATAATGGCATGAATCACAAGGTGTACAATGGGATAGAGGGATAGTAGGGTACAACTTATGTAA ATTTTCAAAACAAGAATGGGAAAGGTGACCTAGCCTATGATGCCAAATATGAGGCAGTTGGATTGGTAGGGACCTAGCCA TATTGACTGAATGAAGAGTAACTAAAGGTTGAACTTGTTGTAGTGGTGGAAGTACCATGATATAAAGTCCATGCTTGATC TCAGCTCTCCCAATCATCTTCAAAGTGATCTTGTCCTGTATATGACAGTAATCATCACTGAAAATCAGTTTGTATGACAA TACCTTGGTAAGTTTATGGATAGATACTAGATTAACAGAAAAACTAGGCACATAAAGAACATTATGCAAAGTCAAAGTGG GAGAAAGAT
Download Genomic Sequence

CDS sequence (LotjaGi5g1v0024900.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGGTTTCACTGCACAGCAAGATGCTTTAGTGGGTAGCTCATATGAAGCATTCAAGCAAAACCTTCCTAGCAATAGTGT TCTGTTCTACACCTTAATATTGGAAAAAGCCCCAGCTGCTAAAGACATGTTCTCCTTTCTAAAGGCTTCTGGACCCACGC ACAGTCCTCAACTCCAAGCCCATGCTGAAAAGGTTTTTGGACTGACACGCGACGCGGCTGCTCAACTCTTAGCAAAAGGA GAAGTGACACTTGCAGATGCCAGCTTAGGTGCTGTTCATGTTCAGAAAGCAGTTGCTGACCCCCATTTCGCGGTGGTTAA AGAAGCACTGCTTAAAACAGTACAGGCAGCAGTTGGGGACAAATGGAGTGAGGAATTGAGCACTGCTTGGGGAGTAGCCT ATGATGGACTCGCAGCTGCAATTAAGAAGGCAATGAGCTGA
Download CDS Sequence

Protein sequence (LotjaGi5g1v0024900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MGFTAQQDALVGSSYEAFKQNLPSNSVLFYTLILEKAPAAKDMFSFLKASGPTHSPQLQAHAEKVFGLTRDAAAQLLAKG EVTLADASLGAVHVQKAVADPHFAVVKEALLKTVQAAVGDKWSEELSTAWGVAYDGLAAAIKKAMS
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR22924:SF92
1 146 146 1.1E-64 –
Gene3D
G3DSA:1.10.490.10
1 144 144 3.5E-48
IPR012292
SUPERFAMILY
SSF46458
1 143 143 1.41E-32
IPR009050
PANTHER
PTHR22924
1 146 146 1.1E-64
IPR001032
ProSiteProfiles
PS01033
3 143 141 26.381
IPR000971
PRINTS
PR00188
4 21 18 2.0E-39 –
Pfam
PF00042
7 111 105 1.4E-15
IPR000971
PRINTS
PR00188
29 49 21 2.0E-39 –
PRINTS
PR00188
55 83 29 2.0E-39 –
ProSitePatterns
PS00208
55 66 12 -
IPR019824
PRINTS
PR00188
117 143 27 2.0E-39 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0019825
Molecular function Oxygen binding Interacting selectively and non-covalently with oxygen (O2).
Subterm of
GO:0020037
Molecular function Heme binding Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi5g1v0024900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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