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LotjaGi5g1v0040700.1

Overview

Field Value
Gene ID LotjaGi5g1v0040700
Transcript ID LotjaGi5g1v0040700.1
Lotus japonicus genome version Gifu v1.2
Description BEL1-like homeodomain protein; TAIR: AT4G32980.1 homeobox protein ATH1; Swiss-Prot: sp|P48731|ATH1_ARATH Homeobox protein ATH1; TrEMBL-Plants: tr|V7CUC5|V7CUC5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0040700
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr5:6845945..6851537) extracted from Lotus japonicus Gifu genome v1.2.

AAAAAAGCAAGGGACTTTTTCTGTGATAAATGTCATTGAGTCTCAGACTGCCATGAACAGAAGTTTGAACAGAGCAGAGT CCAGATATTTTGGTTGCAGTGATTGCAGTGATGCAGATGATAGTAGGAGGACAAAAGAGATCAGAGAGAAAGCAAAAACT GATGGGCCCGGCAATGCCTGAAACAGAAATGAGTGGCACTGCACTGCACCATCAAATACTACTCTCACTTTTCTCTCTTT TTGTTTGTTTTTACTCTGTTGTGGCTCTTCTACCTTCATCTATCTCAATTTAAAGCCTACTTTTTCATTTATCTCTCAAC ACTCCTCATGCATAGCCATTGGTAGGTGCATAGCATAGCTTTGCTTAAGCTTAGTTCCTTCTTTTTAGTGTAACTCATTT TCCCTGTTTAACTACTTGAGAAGGTGGTTTTTTATTTACAAGTGTCAAGTGAAGACAGTTAAATGTTGAGTTTTGTGTGA GTTTAGGAGTTGAGAGAGGAAGGCTATACAATGAATCTTGATGGGATCTGCAAAAATGGAAGTTAATCAGTTTTGGGTAT TGGATACTTGACTAAAAGTATTCCTGCTGTTCATGCAAAAGGGGGTCAATGCAAGCTTTTGACAATACCCTTGTTTAGCA TGCTTTGCACAAGATGGCAATTAGTGAGTTCTGATTTTGATTTGCTTCTTATTCTTGTTTTCAAACAAATTAGTAGCTAT GACTATGATCTTTACCATTGTGCTTCTTCATTTTGATTCATTTTACTCATATTTGTTTTCTATCTAGTTTCGGCTTCCTC TCACTCTCTCTTCCTATAACTCTCTTATTTTCTTATCATATCAGTTATCATTTATTTCATTTCTTTTTTATCTCATAAGC GGATGTGAGATTGAAGTGTGAACATAAGTTTTTCCTTCTTTTGGTTAAAACAAGAATGCTTAAACATTGGAGCTTAAAAC AAGAATGCTACTTTTTCATTGTTAATCTTTGTTTTTTAGTATGCTTTGCACAATCTCGGAATGAGTGAGTTCTGATTCTT CTTATTCTTGTTTTCAAATAAATTAGTAGCTGTGATTTTTTCTATTGTGCTTATACTTTTGGTTATTGTGACAATGTCAA ATTTGATGATGATCATATAATCTTTTGAACTTGAAACAGGCAATGTTGCTTTTTCGTTGTTCCTTTTTGTTATTCTTGGT TCTTTGAGAGATACTGCATATCCTGCTAAGAAGTTATCAAATATTTGGAAGATTTCTGTTGTTTAAAGTAATGTCCCATA TGGTGGTCTACATAACTTTGAAATGATGCTCAATTTATTTACATGTCACATTACTATCTACTATTAGCATCTTTGGATTG TATTCTATTTCCTCACAATTAATTCTGTGTCAAGAAACTACTCACATAAGTTTGTTCCTAGAATTGATTTTTGTTTCAGA ATCAATGGTAGAATGATTCTCAAATATGCACTGCCTTATTTTTTCCCTTGGTTGTAGCAGTTAACTGTCTTGATTTGTCT ATTTTCTTTAAGAGATATAGATACTTATTCTTAGAAAGGGGTTAACTAGATTCTACTGGTCCAGGTTACCAGGAATTCAA ACAGAGTGATCATGCCATTCTTGAAGAGTGCTGTTCTTAGAGGCCATTGAAGTACCAAGAGCCTCTTGTTACGTTTACTA ATTGTTATATCAATGGAGAATGCTATGTTTAGTGATCCATTGGACATGGCTGACCAAAATTCTACTTGCATTGAAGATAA TATCACACAGCACCTCATCCCAAAGCCACTCATCTATTGCTGTTCATTTGACCTCAATAGCCAAAGCCACATCATAAATG GGATTCCAATACTTTCTGGAGAGCAAACTGAACATATAAGTAATGCCCAATTAGATGGTAGCTTCATAAATCCAGTTACT ATTGCTAATTCCAATTCATTTGCTACATCACAAGGGATGACTTTTATGCTAGATGCCTCAAATCCCACTGGTAACAGTGA CTTTGAGGATCATTTAGCTGGAGGAAGGCCAATTTCTTGTGCTTCAGTTCCTGCTAGAATTGGTCTTCAAGAAAACTTAG AAAATTCTGCATCTTTGGAGGTATCAGGACCATTGGTTTTCAATAATTGGCAAGATTCCTCAAACCCTTTGTCTGCAAAT TTTTGTAGTAGTGGCTATGATGAAGCACCCAGTAATGGTAGATGGATTTTTAACAAGTTTCTGAAAGCTTCAGAGGCTGA TCTTACTGGGTTACTGCCTTATTCATCCATAGGAAACATAGAACCGAATGGATGGTCATCATCAAATGTTGCAAACTTGG CTAATCATGCTTATAACTCGTCTAATTGTAGTAATGAGCTATCATTAAGCCTTGCTTCATCGTCTCCAACCACAGGTCAG TGCTCTGACTTGACTCATAGTATGAATGGAACATCATCAGGCAACAGTATGGAAGTTAGTATGAGTATGGATTCTAATGG AAGATTTCAGTTTTCACCGGCAATTCTTGGATCAAGATACCTTTCTGGAATTCAGGAGATACTTGTTCAGATTGCAACAT ATTCATTTGAAAATTTAGAAGAGGTAAATTATTCAGCTGCTGGTGTTAGAGGAGGTAATAAATCAACTTCAGCGTTCACA CCCAAGAGAAGGATAGCAACAAATCACAATGCAGATTCTCCATTGCAAGGACAAGCTGCTGAATCAATCAAATCTCAACT GCTGATGCTTCTACAACTGGTGAAGTGCTGCCTCTTACACTCATTTGGCTTTAGTAAAATCAGTTATTAATTATCATCCT GGTAGAATTAGAGATGAAATGTGCTATATTCTACTAGTTTTCAGTTCAAATAAAATTTATAGATGTAAAAAATTATTAGC ACATGTTTAGCACAACAGTCTAGATCACAAATTTGGAGAAGTTGAATTGTGCATGTTTGGAATCCCTTTATAATTGATTA TGAAGACAATCTATATCAGGTTGAAGCTTTTGTGAGTAGTTTTTGGATGCTAGAATTGACTCTGAGAAAAGAGAAGTTAA TTCAATAGCATGTTTGAATCGACTTTTCTTGGAATCACTTAATTTCTCGCCAGAATTGATTTTAACTTTAGAATAAACTA TATAAGTATTTCCAAACATCCACGATGAAATATATGTAAGCTTATATCCTAATATTATTCACTCATAGTTTTCATCCTAA TATTATTCACTTTGCAGTTTCAATTCTCCAAATAAAATTTATGGACAGGAAAAAATCTACTACTTGTTTAGGAAACAACA ACTACAACAAAAGTCTTTTCTATTAAGTAAGGTCTGCTATGGATTACGCTACACCATTGAGCCCGAACTAAAACCAAATT ATGAGGGATATTATTGATAGTCTAGAAATCAAATTTGGAGTTGGAGATGTTGAATTAAGTGTATTTTTGGAAATCCTTCT ATTGATTATGAAACGAAAATCAATTATGGTGAGAAGTTATGTGAGTAGATTCTGATGAAAAAAAAAATTGTCCAAACATG CTATCTTACATTGAAGTTTTAATCCTAACATGCTGATAATAATCCGTTTCTTTACCCAGGTGGACAATAGATATAGTCAG TGTTTGGATGAGGTACATACCGTTGTATCTGCATTCCATGCTGCTACTGAGCTGGACCCACACATACATGCACATTTTGC TCTTCAAACAATCTCTCTCCTATACAAGGACTTGAGAGAGAGGATTAGCACTCAAATTCTTGCCATGGGGTCCAATTTCA ACATGTCATGCTCTGAAGAGGAGAAGGAATGGTCTATGGAAACTTCATTTGTTCAGAAGCAATGGGCTCTCCAACAGTTG AAAAGAAAAGATCAGTTATGGAGGCCCCAAAGGGGCTTGCCAGAAAGATCTGTCTCAGTTCTACGTGCTTGGATGTTTCA GAATTTCCTTCATCCGTGAGTTTCTGCACTCTTTGTACAATATATTGGATACACGGTGGAAATGGCCAAAATCATAGTGA ACATTCTCGAAAGCTAAGGGAAGTCGCTTTTGTCGACCTTGATTTTTGGCTTCACCATGGTTTTCCTCCTTGAATCCAAA CATGCACATAATTTAAGACAATGATAGAAGTTGTGAATGGAGATAGCCTCATATGCTTATGTTTTTAAATTTGATGTGAT GGATTTCAGGTATCCCAAAGAAGCAGAGAAGCATTTGCTTGCTGTAAAAAGTGGGTTGACAAGGAGTCAGGTACATATTA CTCTGATTTCAAATATTTATGGCTTTAATAAGTCCTCATTTTATATTCAGATTTAGTTTTACTTTTAATCTCCACTATTT AAATTTTATGGCTTTAGTCTACCTTTACTGATAATTTCAGTTTTGGTAATATTTCAATATGATGTAGCTAACAAAAGGTC GTATCACCATTGTCTCATGTTCAAAATAATTCTATATGACCTATTTTGCAATCAAGTTATATAAATAAAATTCACACTTC CAGACAAAGTGTTGATAGAAGTCACACATTGATTAGGTATATGGCCAAATAAGTTCTTGTATGGAGTAGAGCAATCCTCA TCCTTGGGCAAGCTTTTGTGGTAGAGGTAGACTTAATTCGAATTCTAAGATGGTATGATAGACTCATGGATCCGTAGATT CAGCTACCCAAACATTGGTCACCCGCAGGTATTTAGTCTTGCAAATTTTGCTCTCCCAATATCAAGTCTTAGGCATGAGG GGGTGTTGAGAAGTCTCACATTATTGGTAGAACAATACTAACTCCTGAACTAGTTCTTAGGGTAGAGTTACACCTAATCC GAAGTTCCTAAAGTTGAATTGCATAGACTAGTGCACGTGGAAGTGGAGATTTACATGTGTTTGTTAACAAGATATTAACT GTGGGAACCAAAATCAAAATTATCCTTAAAAGGAAGGATTAGAACTGTAAAAATTAGTGAAAATTATTTAAGCCAGTATA TGTAAATTGAGTGACCACAAACTTATTTAAGCGATTATACGTACATACATTGATCCTTTTATCAGTTTGGAGATGAACAA TATGCTATGAAGATTTTTAGGGAAAAAAAAGTTGTTAAACATCTTGTTATTCTTGATTGATTGATATTGCTTTGAGCTAT CTTCATGTTGGTGGACTAGGTATCGAACTGGTTTATAAATGCCCGTGTTCGGCTATGGAAACCAATGATAGAGGAAATGT ATGCTGAAATGAGTAGAAGGAAAGCTTGTCGAAATGAAGAAGGAAAGGAGACCAGTCATAAAAGCAGGATAAGCTTGAAT AATCAAATGTTTAACATCAATTGAAGGTCAAGAAAGTCACATATATATCAATTTGATGTAGCATTATTTTTATCTGTGAT TAATGATTATCATTATCGGATCAAGTAAGAAACACGACTAAGCTGAACTAAGAATTGTGCATAATGCCCTGTTTAGTTGT TGGGTATACTATGGGTATACAATGATTATTGGAGTTGCAGCTCTTAAAAGTATGCTTTTCATACAAGGGTAACACGTATT TTTTGGTGTGTTTAGTTATAGAGAATTGACTGGAAATTTAAGACTAGAAGTGACCAGTGAGACATGTTTGGGG
Download Genomic Sequence

CDS sequence (LotjaGi5g1v0040700.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGAGAATGCTATGTTTAGTGATCCATTGGACATGGCTGACCAAAATTCTACTTGCATTGAAGATAATATCACACAGCA CCTCATCCCAAAGCCACTCATCTATTGCTGTTCATTTGACCTCAATAGCCAAAGCCACATCATAAATGGGATTCCAATAC TTTCTGGAGAGCAAACTGAACATATAAGTAATGCCCAATTAGATGGTAGCTTCATAAATCCAGTTACTATTGCTAATTCC AATTCATTTGCTACATCACAAGGGATGACTTTTATGCTAGATGCCTCAAATCCCACTGGTAACAGTGACTTTGAGGATCA TTTAGCTGGAGGAAGGCCAATTTCTTGTGCTTCAGTTCCTGCTAGAATTGGTCTTCAAGAAAACTTAGAAAATTCTGCAT CTTTGGAGGTATCAGGACCATTGGTTTTCAATAATTGGCAAGATTCCTCAAACCCTTTGTCTGCAAATTTTTGTAGTAGT GGCTATGATGAAGCACCCAGTAATGGTAGATGGATTTTTAACAAGTTTCTGAAAGCTTCAGAGGCTGATCTTACTGGGTT ACTGCCTTATTCATCCATAGGAAACATAGAACCGAATGGATGGTCATCATCAAATGTTGCAAACTTGGCTAATCATGCTT ATAACTCGTCTAATTGTAGTAATGAGCTATCATTAAGCCTTGCTTCATCGTCTCCAACCACAGGTCAGTGCTCTGACTTG ACTCATAGTATGAATGGAACATCATCAGGCAACAGTATGGAAGTTAGTATGAGTATGGATTCTAATGGAAGATTTCAGTT TTCACCGGCAATTCTTGGATCAAGATACCTTTCTGGAATTCAGGAGATACTTGTTCAGATTGCAACATATTCATTTGAAA ATTTAGAAGAGGTAAATTATTCAGCTGCTGGTGTTAGAGGAGGTAATAAATCAACTTCAGCGTTCACACCCAAGAGAAGG ATAGCAACAAATCACAATGCAGATTCTCCATTGCAAGGACAAGCTGCTGAATCAATCAAATCTCAACTGCTGATGCTTCT ACAACTGGTGGACAATAGATATAGTCAGTGTTTGGATGAGGTACATACCGTTGTATCTGCATTCCATGCTGCTACTGAGC TGGACCCACACATACATGCACATTTTGCTCTTCAAACAATCTCTCTCCTATACAAGGACTTGAGAGAGAGGATTAGCACT CAAATTCTTGCCATGGGGTCCAATTTCAACATGTCATGCTCTGAAGAGGAGAAGGAATGGTCTATGGAAACTTCATTTGT TCAGAAGCAATGGGCTCTCCAACAGTTGAAAAGAAAAGATCAGTTATGGAGGCCCCAAAGGGGCTTGCCAGAAAGATCTG TCTCAGTTCTACGTGCTTGGATGTTTCAGAATTTCCTTCATCCGTATCCCAAAGAAGCAGAGAAGCATTTGCTTGCTGTA AAAAGTGGGTTGACAAGGAGTCAGGTATCGAACTGGTTTATAAATGCCCGTGTTCGGCTATGGAAACCAATGATAGAGGA AATGTATGCTGAAATGAGTAGAAGGAAAGCTTGTCGAAATGAAGAAGGAAAGGAGACCAGTCATAAAAGCAGGATAAGCT TGAATAATCAAATGTTTAACATCAATTGA
Download CDS Sequence

Protein sequence (LotjaGi5g1v0040700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MENAMFSDPLDMADQNSTCIEDNITQHLIPKPLIYCCSFDLNSQSHIINGIPILSGEQTEHISNAQLDGSFINPVTIANS NSFATSQGMTFMLDASNPTGNSDFEDHLAGGRPISCASVPARIGLQENLENSASLEVSGPLVFNNWQDSSNPLSANFCSS GYDEAPSNGRWIFNKFLKASEADLTGLLPYSSIGNIEPNGWSSSNVANLANHAYNSSNCSNELSLSLASSSPTTGQCSDL THSMNGTSSGNSMEVSMSMDSNGRFQFSPAILGSRYLSGIQEILVQIATYSFENLEEVNYSAAGVRGGNKSTSAFTPKRR IATNHNADSPLQGQAAESIKSQLLMLLQLVDNRYSQCLDEVHTVVSAFHAATELDPHIHAHFALQTISLLYKDLRERIST QILAMGSNFNMSCSEEEKEWSMETSFVQKQWALQQLKRKDQLWRPQRGLPERSVSVLRAWMFQNFLHPYPKEAEKHLLAV KSGLTRSQVSNWFINARVRLWKPMIEEMYAEMSRRKACRNEEGKETSHKSRISLNNQMFNIN
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR11850
1 518 518 4.7E-149 –
PANTHER
PTHR11850:SF231
1 518 518 4.7E-149 –
SMART
SM00574
265 400 136 2.1E-18
IPR006563
Pfam
PF07526
271 399 129 8.4E-25
IPR006563
Gene3D
G3DSA:1.10.10.60
439 518 80 1.4E-26 –
ProSiteProfiles
PS50071
440 503 64 11.208
IPR001356
SMART
SM00389
443 507 65 5.3E-6
IPR001356
CDD
cd00086
443 504 62 1.18281E-11
IPR001356
SUPERFAMILY
SSF46689
445 512 68 1.41E-15
IPR009057
Pfam
PF05920
460 499 40 1.3E-14
IPR008422

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003677
Molecular function DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
Subterm of
GO:0006355
Biological process Regulation of transcription, DNA-templated Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
Subterm of
Regulates

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Expression data

Expression pattern

Expression pattern of LotjaGi5g1v0040700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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