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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0046500 |
| Transcript ID | LotjaGi5g1v0046500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Non-symbiotic hemoglobin; TAIR: AT3G10520.1 hemoglobin 2; Swiss-Prot: sp|Q9FEP8|LGB_LOTJA Leghemoglobin; TrEMBL-Plants: tr|Q3C1F5|Q3C1F5_LOTJA Leghemoglobin; Found in the gene: LotjaGi5g1v0046500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:7873443..7877903) extracted from Lotus japonicus Gifu genome v1.2.
ATCACGATCTCAAGAAACACACTCCATCTATTTGCACTCTCCAAGTCGCCTATATAAACAATTGTTGGATGTGAAGTTGT TTCATACTTGCATTGGAGAATACAGATAACAAAAAGAAAAAAAGAAAAAGAAAAATGGGTTTCACTGCGCAGCAAGAGGC TCTAGTGGGTAGCTCATACGAAACATTCAAGAAAAACCTTCCTACCAACAGTGTTTTGTTCTACACCGTGTAAGTTTTAT CTCTCAATGAGTGTCTTTCATTTGTGTGTTTTCTCTTCTATTGTTTGTTGTGTTTTGGAAAGAAATGATGTAAATAATGT GAGCCATTAATTTTGGCTTGATTAAAAACAGTATATTGGAGATAGCACCAACTGCAAAAGACATGTTCTCCTTTCTAAAG GAGTCTGGGCCTAAGCATAGTCCTCAGCTCCAGGCCCATGCTGAAAAGGTTTTTGCACTGGTAAGTGCAATCTAGCATAA ACTTTTTAATTTTTTCTTTTTTGACAATAAAACTTAACATTGTTTTTTGTTTTCATTCTTCAATAAACACGGGTATACTA TTACACTATATTTTTTGAATTATAGACTCGTGATGCTGCCACTCAACTCGTAGCAAAAGGAGAAGTGACACTTGCAGATG CCAGCTTAGGTGCTGTCCACGTTCAGAAAGCCGTTACTGATCCTCATTTCGTGGTAATGATCTTAAAAACATGTAGTCTT AAATTTTGCATGGTGTGATTATCAATTTATCACTCCTTTCATAATTAGATTTTCGTTTTTAAGTGCTATTTACGATATCA AATAAAAATTATAACATAAAGGTAGATACTAGTAATTTTTTTAAGGCTCTAAATTAAGATTTAAATATAGTAAAGTGTTC ATCAAAATAACATATCTTTTTAAGCCGCCAATGTATTTAATACTATATATGTTCTCTATTAATAGTCCATTTTATAAAAA AACAATGTTCCTATTGTCCACTTAACATTTTAAGAGAGTATTAAATGCTATTTTTTCCAGTAATGCCCTTATAAGAATAA TAAATGAGGAAATGTACATTTTAAAGTGTAAAATAGGAAAATAAATAATACTTTTATCAAAATTAATTTCACTCCCTAAT AAGTATGTTTCTTCTCTCCCCAGACAGTTACACAAGAATGAAAGTAGTATTATTATAGTCTTCTAAATGATTTTAGGCAA AGTTTGAGTTTAAATTACCCTAATCCTAAATGAGTCAATAATACTTAAAGACAGATTCAAAACAAAAAATACTTAAGATA ATTAGTGATTAAATATGAAATTTTTAATCCACTAATTTTAAATATAATTTTTTTGAAACCATCTTAAATATAATTAGTAC ACCTAAAATTGGTGATTTAACTCAAATTTCTCTTAGGACTACAACTCTTTTGAATATTTCACTTTTCTATAATTTTTTTA ATTATTTAACGTGCCTTAAAAAACTTCTTATATGATGCTATTCTTTGTTTGGCAGGTGGTTAAAGAAGCCCTGCTTCAAA CAGTAAAGGAAGCAGTTGGGGCGGACGAATGGAGTGATGACTTGAGCACCGCTTGGGAAGGAGCATATGATGGACTAGCA ACTGCAATTAAGAAGGCAATGGGTTAAAATCGAAATATATAGTCACAATGGTTTAAAATATAGTCATAATGGCATAAAAT ATTTAAATAATAATATTTGTACTCCAATAAAACTTGTTATAAATAAAATTCAAATACTTAATATATATTTGTCAATTCTG TCAATGATGTTTCTACTTTATAGTTTTGCATACTACTACGTTTAAATTGATTGAAGCTATAAATTCAAATAGTGTCGTGT TAAATCGATTAAAACTGACGATTTAGCGTCGGCTATGATGGCTGATGCTACATTACCATTGGTCAGCTTAGCCGACTATA GCACATAGCTTGCACGATGCTTTGCCCAATGTAAATTCATAAAAATAACTATTGGCCGTATAGGCGAATTAAATTAGCAG ACTCTAAATAAGCCAACGTTATTGTTTTTTTGCATTAGCAGTGCCCACGAAAATCAGTATCGATAACTTCAAGTTGCTAT ACCTAGTATCTCGAAGTCAAGGTACTATTTGTACCACAAGAGATTACCAACTTAGGGACACCGAAACTGTTAGCAAATGA TCCAAGTGGTTATCAAATTTGTATTAGCAGCTCACAAGATAAATGTGATCTAAATATATACCATCAAGTAGATCAATACT TAAGAACTGATATGACTTAAAAGAATCAAACAACTGCAATCATGAAAGTGAAACTTGTGAATTAAAGAGCTTACCAAAAT AGTATAAGATGCAATTGGGAAAATACTTCTCAAAATTGTCCAAAAACACATTTTCACGGAACACAAATTTTGACAGCCAG TATACTATAGGCTGTTAAGTCAGTATTCATCACTTTCCCATTTATGTGGTACACTTGTTTGATTTTTTTACAACTTACAT CAATTTACATCATAGTTAAATTGAAATTACAACTATGAGGTAGTTTTTGCGATATGAGATGGTGATGTGACCGCAAAGTG CAATTCGCTTGATTTGGAGCGAATTCCAAATCCTAGAGGTAATAGAGATCTGTCACATTATATTGTCTTAACTTTTAGCA AATTGGTAATTGAAGTAAGTTGTCTCTAGAAAGAAATTCGCATGAAGCGAATACAAGCTCCACGCTCAAAAAAAATGAAG TGCACATATTATATTATTTACTGTCATACACAAAATATTCTTATTCTCGTGTCATGTCCTAGTAAATGAAAATCGTTGAA ATAAGGGGAGAGATATAATTGATGTAGAAACACCTAGTAGAGAATAAAGGGAAAACAAGTTTGAGTGGTGATATAGAAAA TATATTCCGGAGTCTTGTGATTTTAATTTTAAGAGTTTGATCCAACGCAAAGTTTAAGTTAATTTACTTTAGTCCTAAGT GAATCAATGATATTTAAGATAAGAACGTTAAAAGTTTGATATTAGTAATAGTTTTTTGTGTTTGACAACGTTCACAAAAA AATATTCACAAAAAAATTGTGTATGATGAGAAAGATTTAAGGGGCCCGCCCATGAAGATTGTATGGAAACCACGTGACTT TGTTAAAGACACACTTAGCTCTTAGCTTTGTACTTTGCCTTTGATTGTTGTACTCTTCAAAGACATAGACAGGTCACGTG TGAACAAACTTAGCTCTTTGTTTCACTTTCTTCAAGAACAATTTGCCTTTCTTATACTTAGCTCATACTTTATAACTATA GGGCACTTTGTAATAGGAATATTTTGAATAAGAGTTGTAGTAAGATCATTGAATCCTTGGTCAGTGTGGTTGGTAGACAA TGAAGTTATGGACAATCCAAGTTATGGATAATGTCTTCTTGGATGATAGGGACTAGACCATGCTTGTGCGGACGATACCA TGAGATGATTATAATGCTTGATAGATATAGTCTCTGTGTTATGTATACTTCAGCTGAATTTTCTTCGGGATCCCATTCTC CTTGCTTTGCATTAGCCTTTTCTCATTCTTCATATTGATCTTCAGTAGCTGCTTTGTCGTTTTATCATCATTCAAATATT TCTTCCCCTAATGTGAGAACTTTTTTTGAACTTACAGTTTGTACCTTACACGCATGTGGAGACCAATTTAGAAGCCACGA TCATGATACTTAAATGTCACAATCGTGCCTCTTCACCTCGTAAAGAGCTCGAGTCTAACCTAATTATTTCTATTAATGGA GTATTTGAGTATAAGGTATAGTACCATGTGATCCGCTGACCAAGCATCCTGCTATCACATTGAGCTTTGGAGAATAAGGA GAGGGAGAAAAGAGAAAGACTGAAAGATTGAGTATTTTCAATTCTTTTTAAGATGTTAGCTACTAAGGATTGTATGAGCA ATATGGTACGTTTGCTCCTGGTGGGAAATTAGTCTATGGAACATTAAAGAGAATAAAATGTAAGGAATTAGTTTTGGTGC CTTGACCGAGGTATTAGGAGAAATTTTCATATGCTTTCGACTGCCCTATGATTTGGTAGTGAAATATCTCTTATGTAGCC TTTTCGCCTTATTTTGCAACTATTCAAGTAATCATGTCTGCATGACGGTTGCATTTAGGTAGTGTTCTTGGGTTGGTAGT TTAGGTACAACCTGGTGACTTATCTAGCAGTTGAGAAGTAGAGCTGGCACATAGATTCTTAGGTAACATATGTAAAATCG GAGGAAGATAATTCAATTATTTTGCAATGTCGGGTATTTTATATAATAGATTCTCATTTTTGTTTGTTATTTTCTTTGCT TGTATGATCACAACATCAACTTCAAACTTATAATTTGCTTGAGCTATGAACTCCCCCTAGAGTTGGTTCTTTTACTTGGT CCCTTGGATATGATAACTATGACCTCCATATCTTATATTACTTGTGCGATTGAGTGCACTT
CDS sequence (LotjaGi5g1v0046500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTTTCACTGCGCAGCAAGAGGCTCTAGTGGGTAGCTCATACGAAACATTCAAGAAAAACCTTCCTACCAACAGTGT TTTGTTCTACACCGTTATATTGGAGATAGCACCAACTGCAAAAGACATGTTCTCCTTTCTAAAGGAGTCTGGGCCTAAGC ATAGTCCTCAGCTCCAGGCCCATGCTGAAAAGGTTTTTGCACTGACTCGTGATGCTGCCACTCAACTCGTAGCAAAAGGA GAAGTGACACTTGCAGATGCCAGCTTAGGTGCTGTCCACGTTCAGAAAGCCGTTACTGATCCTCATTTCGTGGTGGTTAA AGAAGCCCTGCTTCAAACAGTAAAGGAAGCAGTTGGGGCGGACGAATGGAGTGATGACTTGAGCACCGCTTGGGAAGGAG CATATGATGGACTAGCAACTGCAATTAAGAAGGCAATGGGTTAA
Protein sequence (LotjaGi5g1v0046500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGFTAQQEALVGSSYETFKKNLPTNSVLFYTVILEIAPTAKDMFSFLKESGPKHSPQLQAHAEKVFALTRDAATQLVAKG EVTLADASLGAVHVQKAVTDPHFVVVKEALLQTVKEAVGADEWSDDLSTAWEGAYDGLATAIKKAMG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 146 | 146 | 3.2E-63 | – | |
| Gene3D | 1 | 145 | 145 | 4.5E-47 | ||
| SUPERFAMILY | 1 | 146 | 146 | 5.79E-33 | ||
| PANTHER | 1 | 146 | 146 | 3.2E-63 | ||
| ProSiteProfiles | 3 | 144 | 142 | 25.899 | ||
| PRINTS | 4 | 21 | 18 | 2.1E-37 | – | |
| Pfam | 7 | 111 | 105 | 6.3E-16 | ||
| PRINTS | 29 | 49 | 21 | 2.1E-37 | – | |
| PRINTS | 55 | 83 | 29 | 2.1E-37 | – | |
| ProSitePatterns | 55 | 66 | 12 | - | ||
| PRINTS | 118 | 144 | 27 | 2.1E-37 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Oxygen binding | Interacting selectively and non-covalently with oxygen (O2). | ||
| Molecular function | Heme binding | Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring. |
Expression pattern of LotjaGi5g1v0046500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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