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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0047400 |
| Transcript ID | LotjaGi5g1v0047400.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | plant/protein (Protein of unknown function, DUF599); TAIR: AT4G31330.1 transmembrane protein, putative (Protein of unknown function, DUF599); Swiss-Prot: sp|Q5HPT1|ISPT_STAEQ Isoprenyl transferase; TrEMBL-Plants: tr|I3SYH7|I3SYH7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0047400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:7970950..7976635) extracted from Lotus japonicus Gifu genome v1.2.
GGAAGCCACAAACATCTTTCGTTATTTCCACTACTATATATTCACTTATCGCCGTTCGTATTTGCACACTTGAGAATAAA GGAGAGTAGTGACACAAGTTCAAGAGGAGGAAGAGCAAGGTCACTACAATATATATCAAAATTTGATGATGGAATGGAGG AAGTGCTATTTGGATGTGATATTGGTTCCCTTGGGATTGCTTATAAGCATTTGTTACAATTTCTGGTTGTGGCATAAGGT TCGAACTCAGCCACACACAACCACTGTTGGCATCAATTCCAGTGGCCGTAGAAATTGGGTTAATGCCATAATGAAGGTAC AATTTTTTATTTTCTGATTTACTAATGTTTATGATATAATATTGCGATTCATGTTTAGCATTAATTGAACTATTTCAGAT AAAACGCGCAGATCTGTAGATTCATTATAGAAGTTTTTACTAGACTTATCTTATTTCCGGGGAATATAAGAAGGAAATGG AGTATAAGAATGCAAGATTATGATCCCAAGAATAGGATATTGCGTGTTCTATATTCCTTTGGATATAGCTTTCCTCAATT TATTCTGGTTCGATTCTACCAGAAGATAATGACACTTTAACATTTAGTTAATTAAAATCAAAGAAAAAATGAAATGTTCT TTAAATATGGAATAATTAGGTGGATATCCAATTCCAGTGGGTTGTTGCTAGACCTAGATAATTTCCATGTGCACTTGCAC GAATTAAAGATAATGTATTCAAACAGAAAATCTAACATTTGTGCTCCAAATAGTGCAAGCTGCTTTTATCTCACTTCTAT ACCCAAAAAAAAAGCAATTAATTTTATCTTTTCATAATTTACACTAATACGTACCAATGACTATGAGTCAATTAAATATC ATCACATCTTCACAACAACCCCACAAATTCTTTTTATAAATGAGTGTTAGAAAAAAAAATTCCTCCTTTTACCTCAAATT GATATCGAATTAAATGGAAGTACAAGTTTTTAAATACTTCAAACGATGATAGTTGTCCGATCCTTCCAACTTTTACACTT TCTCTATCCTTTTTAGAAAAAAAAAATTGGTGTTTTCTCCTACCACAAATATTATTTAGTTAGGTAATTTTTTGGATTAA ATGTGACATCACCAAAATGTTGTTTATTTCAATTTAGATAGAGTCCCATGATTCCAAGAAAAAGAATTACTACTTTATGT ATAGTTCTGTTCTGTCCATACAAGTAACTCATATATTATTACCTAACTAGTAGGTGGCTGCTGTGATGAATCATCACACA ATGGGTAAGCTATAAGCTTCCTTTTTTTTTTGCTAAGCAGCTATAAGCTTCCATGAATGGAGAATAAATTATACCCATCC AAAATCCACCTCCATCTATTGAAATAAAAAAGAAGAGAGAAAAAAATGTAAAATATGACAAATGATATAATAGGAAAAAA AAAATGAAAGTATCAATATATCAAAACTCTCCATTAACACACTAAGGACACTATTTTAGCTTTTGTTTTGTTATTCATCA AATTTTGACCCAAATTAGTTTTCATTCACAAAAATAAAGTGTACATGTACTATTTACTTGACGAGGTATGTTAGGAAAGG TTAAGGAGTCTCACATTGACTAATAAAATAGTTAAATAAGACTTTAGTTAAATAGGTCTAGCTAATTAATATTTGTATAA ATTAATTGTTATTATCATTGCAGGATAATGAAAAGAAAAACATCCTGGCCGTTCAATCACTGAGGAACACAATCATGGGA GCAACCCTAATGGCCACAACCTCCATTCTCCTCTGCTCAGGTTTAGCAGCAGTTATAAGCAGCACCTACAGCGTGAAGAA GCCACTCAACGACGCAGTTTATGGCGGTCACGGCGAGTTCATGATAGCACTGAAATACGTTACTCTGCTCACAATCTTCC TCTTCTCATTCTTCTGCCACTCCCTGTCCATAAGGTTCTTGAACCAAGTCAACTTCTTAATCAACACCCCTCAAGATCCA ATGTCATTGGTTACCCCTGAATATATAAGCCAGATCTTGGAGAGAGGTTTCGTTCTCAACACTGTGGGGAACAGGCTCTT CTATACAGGGCTTCCTCTTTTGCTTTGGATCTTTGGCCCTGTGCTGGTGTTCCTGTCCTCTGTCACGATGGTTCCAGTGC TTTACAATCTTGATGTTGTGTTCTTTAGTGGGAAGGGAAAGATGGACTTGAACCAAAAGGGGGATTTTGTTTGAATAAAA ATGTAACATATCTATCTATATATATTATAAAGCAAAATCACTCCAAGAAAAAACCTTCCACGTGGCATCACTACAAGAAT TCTGCTATGAGGGTGATTTTAGGAGCTTTTATGCCACGTGTCCTTCTATTAAGCGGCGGTTAACTTTTTGGACCATAATG CTACTACAAAAATAACTTCTAACCCACTTAGTAAATAAATTCTCACCCAATTAAAAAATCAACTACCTAATTTCTACCTC CATTATTCACGTGAAATTCATTTTATATTTCCAAAATGCTTTTAAAAGTTCATGCTTTTAAAAAAAAAAAAACTAACCAT TTACCTCCGAACTCCCACCACGTCTATTTACATTTTATAACCACCCATAATGTATATTGTATACCATGTATAAAACCACG TCTATTTCCTACTGAACTTTTTTTTTTTTTCTTCCAAAGTTCATGGTTTTAAAAAAAAACCAACTTTCACGTTGGTTTAC CTCCAAACTCCCACCATCATTTACATTTGATAACCACCCACCATGTATACCATGTATAAAAAGTCAACCGCCAAAAAAAG ATGAACTACCTTGAGAAAACACTTCTATAAATTCCTCATGTGATTTCATAATTCATCCATCACTTTTCCATCTAAAAGTT GTCATGGCTCTTAGTCTAACTGTTGACGATGTCTCTTCCATTTCAAAGGAAAAGGAAGTGTGGAGAGTTATTGTGAAGGT GGTGCGGAAGTGGATGACTCCAAGTTTCGATCGTTCAAAACTTCCTAATTTGATGGAGTTGGTTTTAATGGATGCAAAGG TTCGACTTCTTAGTTGTTTTAAATATATATCTATTTGACTCGATGTTAGTTTACAATTTTAAGTTTTTTCCGTTCACTTA CATGTTCTTAATCTACAGGGTGATAGGATCCACATCACAGTGCAAAGGACTCATGTTTATAAGTTTAATCCTTTGTTAGT TGAGGGTCGAGTATACATGTTGTCACATTTCAGTGTTGGTGATAGCGCTCTGGATTTTCGTACAACGGCACATGCTCACT GGATAATCATTGGTTTTGATTCGGTTGTTCAAACCCTAACCGACGATCTCATCACTAAGAGTCCTTATTCATTTGTTTCT GTTTCTGATATCATGTTCAATGATCCAGATCAGACACTGATAGTCGGTGCAATTTCAAACTAAAACTGTATACATCCGTA AAATTATTTGTGATCTATCATATTTTGTTTGTCTCGCATATGTGATAGGGATCCTTACCGGCCATAGCGGCGAGCAGGAA TTTGAAAAAAACCATCAAGTGCGAAAAAGGATTACCATAGAGATTGAACAAGAAGGGTAATTATTAGTATTTTGAACAAA AACGCAAAATCTATTAAAATTTTGAATTCATTAACCAATTATTGTGAGTAATAATTTTAATCATAAGTTTGTTGAAAACA GAGTGAAAGTTGAGTGTGCATTTTTTGGAAGCTACGTCCAAGAGTTATTCTCTGCTTTATCTTCACGCGATCTGAGCGGC GTTGTGGTTTTAATCCTGTTTGCAAAAATCAAGCATTTTAAAGATATGTTCGGGAAAAAAATGTTTATATCTGGTATGTT CAATGTTTCTTTTTATAAACATATTAAAATAATTGTGTAGGTCAACAAAGCCTGCAAAATGCATATGGTGCAACACGGGG CCTCTTTAATCCTGAGATTCCTAAAGCTACTGTTGTGAGGGACAAGTACGACCATACCCATTACTTATGCTCATTTGCAT ATTAATTTTTTAATTTTATGGCTTCATTAGAATTGACATAATTATTGATGCAATAGGTTTTTCGAGATGAATGAACCTGG ATCTCAGGTGCATACTCAGTTGTCCGACTCTTCAAAACCTTCCCTCGATAAAGAGCTCTTAAAACTCTCAGGTATGAAAA CTTTCGAGCAAATTAGAGCCATGAATGAGGTCTATCAATATTTCTTTTCTAAAAAAAATAATTTTTTATTTATGTGTTTT TTCTTTTGTTGTTTTTAAATGTATTTAAGTAACCTGGTCATTTTATGCAGAAGTCATGCTGTGTTGTGTTAGGGACCATC ATACAGATACCTGAGCGGAATAATTGGTGGTACAAAGCTTGCAAGTGCAACAAAAAAGTTATTTGGGATGAGAAAATGTA TTTCTGTGATAACTGTAACCGTCATTATTTTTCCATGATCCCTAGGTATTGAACTACCTATTCCATTTTGTGAAGAAAAT TAAATTTCTTGACCATTTAATTTTCCTTTTTTTGGTGATACTATAGGTTCCGTTTGCAAGTCAAAGTAAAGCAGGGTAAT GACATTGCTGCATTGGTCATATTTGACAAAGAAGCGAGTGTTCTTCTTGAAACTACTAGTGCTGACTTGGTTGATTCGTC AACAAAGGTATCTGTTTATGAGATCAAAGTGAAATTTTATCAAAAAATGTAATACTACTGGTACTCTCTGTTTTAGCATG TCTTAGTGCTTAAATATTTAATTAGTGACAGAATCCTGCTGGCTATGGCTCTACAACTCCTGCTGAATTACTTAAGTTGT TGGAAAAGACCTCTTTCTTTAGGATTGAAGTTAACAACACTTCAAGCTACAGGTTCGAGTCATCATATCGTGTCAACAAA ACTTGTGGAGATCCCGGCTCCAGGTTTGAGCCATCATATCGTGTCAAGAAAATATGTGCAGATCCTGACTTAATTGTTCA TTTCAAGGAAGTTTTCCCTCCTCCTAATGTAACTAGGCTCATTGCGAATCATTTTTTCCTATATTTATTGAGTTTATTTA TTGAAAATGTGTTGTTCACATATTATTGTCATATTTTGTTTGCTTATAGGACGACACTCCTCCATTGCTATTGCTAGAAA CACCTACATCTGATGAGAGTGTTGAAAACGCGAGTTCCAGTTTGGCCAAGGTTACATCTACTATCTATTTTATTTAGTAT AAATTTTTATTTTTAATAATTATGCGGTTATTTAAGTTTTTACTACATAACATGATCTTAATGAAGAGTTTATTGCTGCT GCGAGTGGCGATGTTGTTGATCCTAACATAGAAAAAAAAGAAGTTCCCCCATGCAAGCGGATCACTCACTCGGAGAATGA AGGAGTTGGTTCAACTAATAACAAGAAGAAGCTGATCAAGAAGATTAAGAAGGAGAAGAATTGACAAATCATATTTTGGA TATTAATTTTATGTATTGAACTTTTCATGTTCCTTTTTTAGGCGTTATGTTTGTTTTTTAAGTATTTCATGTTTTCATGT ATTTGGCTTAGTCGTTATGTTTGTTGTTTAAGTATTTGGCTTATGTTTTTATGAAGAACTTGATATATTATTTTAATTTA AGATGTTTAAATTTTCGTGCAATTTTTTTTTTTTTTGAAAATGGAATGTATATTATTATAAAAGTCCAGAACCGAAAACA CTCTAG
CDS sequence (LotjaGi5g1v0047400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGGAATGGAGGAAGTGCTATTTGGATGTGATATTGGTTCCCTTGGGATTGCTTATAAGCATTTGTTACAATTTCTG GTTGTGGCATAAGGTTCGAACTCAGCCACACACAACCACTGTTGGCATCAATTCCAGTGGCCGTAGAAATTGGGTTAATG CCATAATGAAGGATAATGAAAAGAAAAACATCCTGGCCGTTCAATCACTGAGGAACACAATCATGGGAGCAACCCTAATG GCCACAACCTCCATTCTCCTCTGCTCAGGTTTAGCAGCAGTTATAAGCAGCACCTACAGCGTGAAGAAGCCACTCAACGA CGCAGTTTATGGCGGTCACGGCGAGTTCATGATAGCACTGAAATACGTTACTCTGCTCACAATCTTCCTCTTCTCATTCT TCTGCCACTCCCTGTCCATAAGGTTCTTGAACCAAGTCAACTTCTTAATCAACACCCCTCAAGATCCAATGTCATTGGTT ACCCCTGAATATATAAGCCAGATCTTGGAGAGAGGTTTCGTTCTCAACACTGTGGGGAACAGGCTCTTCTATACAGGGCT TCCTCTTTTGCTTTGGATCTTTGGCCCTGTGCTGGTGTTCCTGTCCTCTGTCACGATGGTTCCAGTGCTTTACAATCTTG ATGTTGTGTTCTTTAGTGGGAAGGGAAAGATGGACTTGAACCAAAAGGGGGATTTTGTTTGA
Protein sequence (LotjaGi5g1v0047400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMEWRKCYLDVILVPLGLLISICYNFWLWHKVRTQPHTTTVGINSSGRRNWVNAIMKDNEKKNILAVQSLRNTIMGATLM ATTSILLCSGLAAVISSTYSVKKPLNDAVYGGHGEFMIALKYVTLLTIFLFSFFCHSLSIRFLNQVNFLINTPQDPMSLV TPEYISQILERGFVLNTVGNRLFYTGLPLLLWIFGPVLVFLSSVTMVPVLYNLDVVFFSGKGKMDLNQKGDFV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 6 | 6 | - | – | |
| PANTHER | 2 | 233 | 232 | 3.3E-131 | – | |
| PANTHER | 2 | 233 | 232 | 3.3E-131 | – | |
| TMHMM | 7 | 29 | 23 | - | – | |
| Phobius | 7 | 27 | 21 | - | – | |
| Pfam | 12 | 216 | 205 | 1.4E-81 | ||
| Phobius | 28 | 78 | 51 | - | – | |
| TMHMM | 75 | 97 | 23 | - | – | |
| Phobius | 79 | 101 | 23 | - | – | |
| Phobius | 102 | 121 | 20 | - | – | |
| TMHMM | 118 | 140 | 23 | - | – | |
| Phobius | 122 | 143 | 22 | - | – | |
| Phobius | 144 | 188 | 45 | - | – | |
| TMHMM | 189 | 211 | 23 | - | – | |
| Phobius | 189 | 213 | 25 | - | – | |
| Phobius | 214 | 233 | 20 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0047400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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