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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0048500 |
| Transcript ID | LotjaGi5g1v0048500.1 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | G-protein coupled receptor 1; TAIR: AT1G48270.1 G-protein-coupled receptor 1; Swiss-Prot: sp|O04714|GCR1_ARATH G-protein coupled receptor 1; TrEMBL-Plants: tr|B6GV49|B6GV49_LOTJA Putative G-protein coupled receptor; Found in the gene: LotjaGi5g1v0048500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:8122858..8129980) extracted from Lotus japonicus Gifu genome v1.2.
AAAAAATGTGAAAAATGAGCCAAAATTAAAAGAAAATTGAAAAACCGTTTTCCTTTCACCTCTTTTCTTCCCAATCCCGT ATAACTGGGAACTGAGAACTAACAGCGTGATCGGCGATCGCGAACTCGTTCTGTTCATGGCAACCTCCGCCGCCATCGGC GGCGCACTCACGGCGCACGATCGCTGGATTCTTACGGCGGTGAACGCCGGAGCATCGAGCCTGTCGTTGGCTGGGTCCAG CTTCATTGTACTCTGTTACCTCCTCTTCAAGGAGCTCCGCAAGTTCTCCTTCAAGCTCGTTTTCTACCTCGCCCTCTCTG TATGCATCATTTTTCTTCGCTTCCATATTTATCTTCTTCAGATCTAAAACCCTACGTTTAAATATTGCTTCAACTTTTTC ATTTGTCACTTTAACTCTTCGCACAGTTCTTATCTCTTTCAATTGAAATTACTGCATTGTCGATTTCACATTCTTGTTGT TCTTGTTGTTTTTGGTTGCATCATGTTGCTGCTTCTCATGAATGTAATCAATCAATTTGATTTTAGAACGAATAAGCATA AAACCACTGTTTTGAGCTTTCTCAATTAGGTATTCATCGCTCTGAAGATAGGTTAGCTTCTACTGTAGTTCTAACCAGTG TTGTTAATCACGGATCGAGGAAAATAGCGGAAAGCGAAAAATCCGCTATTTCAAGTCCACATAGCGGAAAAATAGCGGAC AATAGGGGAAAATAGCAGAATAGCGGTGAGCCCTCAGAGTGCTATGTTATAGCGCCGCTATAACCGCTATTTGACCACAC TGTAATCTAACTAGCAGTCTAATGCTCAAGAATGAACCTAAGCTTAAGTCAGTCCCAGTTCATTTGGGGACTGCTTGATC CAGATTTTGATCTCAGTAAGGCAGTTTTGCTTCTTCTTTAGCCTAATTTCGCACGCCAGGTGAATTTAGACTACTCTGTA AAACAATATTAATAATAATAATAATAATAATTATAATAACAGTTAGGACTTAGGAGTCTAGATATCCTTTAGTATGTTTA AGAATATAACTTATACCTAGTGAGCTTGTAAATAGAGTATGCTTATCAATGGAATTTAGATGTTGTGAAACTATTACTAA CTCATTATTTACAGTAGAAGTTACCTTTGCTGATGAAAACTTTTAGATTACTAGTAAACGTTTGAAGTCATGAAACCAAC TTTTGTTGGTTTTTTTTTACCCTAGCCACTTTAATTTGTATTTGTAATGCTGTTTTACAATTGAGAAGTCGGGGTCCTTC ACATCAGAACTATATATGTCTGTTCCTTTGCAATAGGTGGTCAGTTATTACATTGTTTTTTCTTTGTTTCCTCTTCTGAG TCATAATGCTCTGTTATCATTTATTGCCTGTTGCAGGATATGCTTTGCAGTTTCTTCAACGTAATAGGGTATATTCGCTA GATCAACCCCCATCTTCTTTAAATGTATGTATCAACTGAAGCTGTTCATCTTGTGATTGATAGAAGTTACATTTTTATAC AGGGACCCATCCCAAGGTTTCTTTTGTTATGCTCAGGGATATAGCACACATTTCTTTTGTGTGGCGTCTTTCCTATGGAC TACAACTATTGCATTTACCCTACACCGTACTGTTGTAAAACACAAAACAGATGTTGAAGATTTGGAGGCCATGTTTCACT TGTATGTTTGGGGTATGCATCTATGAATGACCAGCTTTTTATATTCTAGCTGTAGAAATGGCCTATTTTTGCAGTAATCT ACAAGTCCTGTAACTTCCGATCCCTTGAATTCTAACTTCAAAATGAATTTTTGGAGCAAATTAATGATGAGATCATAAGA AGTGATGTGAACATTGATTATAGCTCAAAATAACATGATTTAGCCTGAAAGGTAAAAACAATCAGCTCATGCATGGTCTA TGGCCCAAACTCCTTAATTTGAGTGTTTATGGCTCAAAACCCCCTCAATAGCTCTATCTTAGGCCCAAATGATGGTGAGG ACGTGATTGAGCTCAAATTCTGATGGAGAGGCTTTGTTTAGCCCAAGTGTCTTAAACATGTCCATTTAGTGCTTCTTTAA TCCTCTTAGCCCTTGCTCTTTTAATTTGTCCACTAGATATTTGCAATGCATCCTTCAAGAGCTTGAATTAGATTGTCCAA TCCTTAATTAACATCACTTCTTATGATCTCATCAATTAATGTTGGTGGAATGGCTTCGATAATGTACGAAGAGTAGGGCT TTTAACTTCTGTCTTAATTTCAAGCATTTTATTAGCAACATTTAGAGAGCTCATTTGATGTACTTTTTGACTTTTCATAG GTACATCCCTTGTTATGACAGTTATGCGCTCCTTTGGTAATGACCATAAGCATTTTGGTGCCTGGTGTTGGACTCAAACA GGTCGCACAGGGAAGGCAAGTAGTCTTAGGACTACAGGTTACATATTGTTTATGTAATTCCTGAAAATTTCTTTGAAGTT TCAACTTCCGCTTTGTTTCTCTCCTTTTACATATGATATAGAATGTGTTTTGATTCATTAAAAGAGGAACTTGCACTGGG GACCAGTTTTCTGCACTTTTAAATCTAAAAATTAAACATAAATTGACTTTAAGATAATTTTAGTTGACTTTATTTAAAGC ATGGACGTTGTCTTTCATAACTGTAGCAGGGGGTAAGTTGTTGGTTTCTGGGATTTATTTGTAATTACAATTTGTTCTAA GTTATACTGTTATAGTAAAAAATAAAACATTATGCTTTCAGGAAATGATACAAAGACACTAAGTAGGGAATCCCCTTTAC TTTAATGATTTAGTATCTCAATTATGTTTGTCAGTCTCTCTCTTAATATTTTTTTTATCTGGGAAATTTGACATCCCATA AATGCAAATGGTCTGGAAATTAAAGTAAGCACTTGGTTGCCGATGAGAAGAATGTTATCCATGTTGCAATTTTTGTTCTT CAAAATCAAATATGTAGTTATTAACAGGAAAGGAAGCTAAGGTTAACAGCTAATAAAAATCCATGCAAGAAAATTGTGCA GGCCATTAAAAAAGTTCTTACAGCATTCTATCCACGTATTTGTTGAGGGCTTAGGATGTTTCTCATAATGGCATTATTGG TTATCCTAAAGAAGACTGGTAGTAATGAATATTAGAAAGAAATCTGGATAACAACAGATACCTCCCAATTTTCTGCAACT TTGGATTGCATATCTACTTCATTTTTCGTATGTATTTTGTTTATCAAAATAATCTGCTCATTTTTCTATTTCTCCTTATC CATTATAAACAAGTACCTTTTCCTGTGCAGGCAATTCATTTTATAACATTTTACATGCCACTTTGGGGTGCAATTCTATA TAATGGGTTTACATACTTGCAAGTGATACGCATGCTGAATAACGCAACCCGTGTATGTATCTATCTTTGTTGCTTTTTCC GAAGACAAAAATGTGCTTAGGTGACTTGTGTGACCTCATCTATCATTTCTTGGCAAATTTCAGATGGCAGTTGGCATGTC AGGTCAAGCTTATGTCTCAGATACAAGAGATAACATGAGGGTATTTTATCTTGTTTTTTTTATGTTTCTGTTAGAATATA TAAAACATACGTCATAATATTAACATTTTATCTTTAGAACATTTTAGAGTACCTTAGTTACCTAAGGTTTATTTCCATAT TTCCTTAAATTTCATAATTTGTTTATGATATGTATTAGAATTAAGAATATATTACAAGTATATATAGATATTAGTTTTTT GTGTTTTGTAACTATTAGAATTTGGGAGGCCTAACTCATCCCTAAAGCTAGCTCAAGAGTTGAGAGTTGCTCTACCCTTT ATAATTACTTGTTTGGCCATATCTCTAGCCAATGTGGGACTTCTAACACACCCCCTCACGCCCAGGGCTGACATCTGGAC TTCTAATAACTAACCTTTTCTTTCATATTTGACATTTTACGTTCTGCATTGTGGGATATTTATTGTGATATACTGTTTCT GTTCAAATGCCTTATTGATCACTCTGAGGCAGGATTGTTTTGGAATTCAAGTAAATTTTCATAGATGCTTCTCACATATT TTCATGGGAAAATATTAAAATTAATACATTGTTCTGTGATTTCTAATGTGGTTTAGAGATTGATAAGAACCTTGGGAGAA CCACACCACAAAAGCTAGCTGTTGTAGTTGGAGAGCCCAAGGCCTTATAAACCCCACATTAGAATCCCATACTTCCAATG TGGGACTCAAGTCCCATACCTTGCAATGGGGTCCTAACATCCCACCACGCTCCGCAGCCCCGGCGCCCACGCGGGCTGGC TGTGCACTAGCCCCACGACTAGTCCCGGGCGAACACTGCAATGCCGGCGTCACCACCCGCGCCGCTCGTTTGCAGCTCAG AGACATGGTGGAAGGCTCTGATACCATTGATAAGAACCTTGGGAGAACCACACCACAAAAGCTAGCTGTTGTAGTTGGAG AGCCCAAGGCCTTATAAACCCCACATTAGAATCCCATACTTCCAATGTGGGACTCAAGTCCCATACCTTGCAATGGGGTC CTAACAGAGATGCCCACCCCTTCTTTTTGTCACTCCAGGATTTTCATGAATAAATTATAACCATCCTTAAACCAATTGCT TAAGATGAAATTATAATATCTAGCCTCTATGTTTCCATTGAACAACACTTAGTATTTTGTGCTTTGCATTGCAGGCTCTG AATCGCTGGGGATACTATCCACTAATTCTAATAGGATCTTGGGCTTTTGGCACTATTAACCGTATTCATGATTTTTTTGA CCCCAGCCATAAGATCTTTTGGCTCTCACTTCTTGATGTTGGAACCGCTGCTCTAATGGTATCTACTAGTAACCATACTG TTTTCAGCATTATTTTCCATTCTCTGAATGTTCTATAACTTATCTGGAAACTTGGCGTGCTTGGCATTCATTGATAAATC CTCCCTATCTTTTGTGATTCCTCCCATCTCCTAGCACCCTCCTATAACATTTTACTTTCTCTAACAATCAGGCATTCTCT TCCCTACTAATATGTGAATGACAAACTAAAAGGCATTATCTAATTTGTAATGCAGATTCATCTAAACTGAGTTCAGATTT GATGTCATGTGAAACTGTACATCAATTACAACATAGTGAAAAGTACTAATATGTCATCTTGCTAAGCTTTCTCACTTTGT CTACTTACTGCAGGGGCTCTTTAACTCAATTGCATATGGCCTCAATTCTTCTGTTCGACGAGCAATTTGTGAAAGACTGG ACAAGTAAGACCTGATTCTGCTCTATCTGCTCTGAGGGATTTTTTATTAAATTGGATCATCCTAAATTTGTTTCTTTAAC TTTCAAGTTGCAATATCCTTCATCACATATTCTGGATTCGACTTGTGCACTCTTGTGGCCAGCCTAATTATGTTCGCCTT ACCACCTAGCCTTTTTGTTTTAAAATAATAAAAAAAAGAAGAGAAAAACCTGTTTGATAGAAACAGTTTTGAAAAGCTGT TATTTAAAACAGTTCTATTTTCAGGTTTTAAAACTAAATCCCAAAACAGCTCAGATATTTTATGTTTTTGTTTTTAGTTT TCATGTTGTATGTCTTTCAACTTTATAAAGCATCTCGTTTAAACAGTTTCTTCCTTTTCTTCTTTTGAATGACAGTTTGT TAAAATTGTTTCTGAAAATAATTTTTAAATTAAAAAACTTGAGAAGAGAATCAAACAAGCTCTTAGCCAGTCTTTTTTCT CCCTATTCTCCCAACCTCCTCATCTTCTTCACGTTACTGACCCAGTTTGGTGGATTTTATACTATCACACAGGAAAACTG TTAATTAGGTTACTTATCTCATCTTAGCTTGAGAACTTTATGGCCAAGTCTAGGGGCACCCGCACATTTGGTGCCCCTCT GCAAGACATAACATAGACTGTTGGGTAGCTGTTTAAATGGATGGGTATGGATTTTGACTATGGTTGTATTCTCTGATGAG CCCTTCACACATCACAACCTTTTTAATGTTACCTTGCGTCACACCTTCATGACATTTATTCAAGTTTACCTTGTTTTGTT ATCGTTGCTTCTTCGTTCTTGCTTTTTTTTTCCTAGCACATTAAACTTAAAACAAATGAACAAATTTGCTTCCATGTTTC TGGGTTTCAGGTGCTGGCCAGAGAGACTATACAGATGGCTCCCTAACAAATTTAAGTACAAGAACCTACAACAGGAAAGT GAACTAGTTTCGTTTCAAACTGAAGGTCAGCGATAGTGAAGAGACATATAACATATTGCATCCTCCATACCATATTTTGG CACTTTTCATGGACAAAAGAGCGGGCAGCAATACTTTCCGGCGAATATCATTGCTCTGCTGCTTCATTTACCTGAGTATG ATACTGATGATGACCCTTCTTAAACAAATCAGAGGACAGTAAAGTCCATGTTGAATGTGTCTTTGGAAGCTAATTTCCTC AAACTGAAGACCACTTGTGACTGCGGTGCTTTTATTTTTCTCAGAAATGCTCAATGTCTCTCCCTGTGATTCATCATTCG CTGCATGACCTTGTGTGATGTATCATCTATTCCTCATTTCTGCTATAGAATGTTTTCTTAATTTTTAGGTTTGTAGACTA GGTGCACTTTCAGATTGTTACAAATTGCTAACGACTTCCCATTTTTTGCTGGGCATTTGGTTGACCGCCAGCAATAGAAG TACTTCAGTGTGAAACGCACATGTATAGATCGATTTTGTTTATTCTTTTCTTCCTCTCTGGTCCCTTTGATTCCTACTAT TACTTATAGAAGAATGCTAGCAAGACTCTCTTTCCAAAATTGGTTGAAATTCATATTTTTAATGGTCCTTACTTGAATTT TATCCAATCAATGAGGGTGTTGAAAAGACGGTTAGAAAGAGTGTTAACTAGCATTTTTCAGAAAGAGAGTATTGCTAGAA TTTTTCATGTGTACAATAAGCAAACAGAAGGTCTTAAAGTTTGTAACCGGAGAGACAAGAGTCATTATTTCATATCTGAC TAGCAGTGCTCAACGATGTACAAAATCAGAATCAAAAGTTCCTATGTATATAATTTCATTTGATGATTACAACTAGAAAC GTT
CDS sequence (LotjaGi5g1v0048500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAACCTCCGCCGCCATCGGCGGCGCACTCACGGCGCACGATCGCTGGATTCTTACGGCGGTGAACGCCGGAGCATC GAGCCTGTCGTTGGCTGGGTCCAGCTTCATTGTACTCTGTTACCTCCTCTTCAAGGAGCTCCGCAAGTTCTCCTTCAAGC TCGTTTTCTACCTCGCCCTCTCTGATATGCTTTGCAGTTTCTTCAACGTAATAGGGGACCCATCCCAAGGTTTCTTTTGT TATGCTCAGGGATATAGCACACATTTCTTTTGTGTGGCGTCTTTCCTATGGACTACAACTATTGCATTTACCCTACACCG TACTGTTGTAAAACACAAAACAGATGTTGAAGATTTGGAGGCCATGTTTCACTTGTATGTTTGGGGTACATCCCTTGTTA TGACAGTTATGCGCTCCTTTGGTAATGACCATAAGCATTTTGGTGCCTGGTGTTGGACTCAAACAGGTCGCACAGGGAAG GCAAGTAGTCTTAGGACTACAGGTTACATATTGTTTATGTAA
Protein sequence (LotjaGi5g1v0048500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MATSAAIGGALTAHDRWILTAVNAGASSLSLAGSSFIVLCYLLFKELRKFSFKLVFYLALSDMLCSFFNVIGDPSQGFFC YAQGYSTHFFCVASFLWTTTIAFTLHRTVVKHKTDVEDLEAMFHLYVWGTSLVMTVMRSFGNDHKHFGAWCWTQTGRTGK ASSLRTTGYILFM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 16 | 16 | - | – | |
| PANTHER | 8 | 163 | 156 | 5.8E-61 | – | |
| PANTHER | 8 | 163 | 156 | 5.8E-61 | – | |
| Gene3D | 10 | 173 | 164 | 9.6E-22 | – | |
| SUPERFAMILY | 16 | 154 | 139 | 1.46E-9 | – | |
| Phobius | 17 | 42 | 26 | - | – | |
| ProSiteProfiles | 19 | 173 | 155 | 16.797 | ||
| PRINTS | 19 | 34 | 16 | 2.3E-62 | ||
| TMHMM | 20 | 42 | 23 | - | – | |
| Pfam | 27 | 160 | 134 | 4.0E-12 | – | |
| PRINTS | 30 | 48 | 19 | 4.6E-29 | ||
| PRINTS | 36 | 50 | 15 | 2.3E-62 | ||
| CDD | 36 | 152 | 117 | 1.69731E-15 | – | |
| Phobius | 43 | 53 | 11 | - | – | |
| PRINTS | 49 | 64 | 16 | 4.6E-29 | ||
| PRINTS | 52 | 74 | 23 | 2.3E-62 | ||
| Phobius | 54 | 72 | 19 | - | – | |
| TMHMM | 54 | 71 | 18 | - | – | |
| Phobius | 73 | 83 | 11 | - | – | |
| PRINTS | 80 | 98 | 19 | 4.6E-29 | ||
| PRINTS | 82 | 95 | 14 | 2.3E-62 | ||
| Phobius | 84 | 105 | 22 | - | – | |
| TMHMM | 86 | 105 | 20 | - | – | |
| PRINTS | 97 | 115 | 19 | 2.3E-62 | ||
| Phobius | 106 | 173 | 68 | - | – | |
| PRINTS | 120 | 135 | 16 | 2.3E-62 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Transmembrane signaling receptor activity | Combining with an extracellular or intracellular signal and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity or state as part of signal transduction. | ||
| Biological process | Cell surface receptor signaling pathway | A series of molecular signals initiated by activation of a receptor on the surface of a cell. The pathway begins with binding of an extracellular ligand to a cell surface receptor, or for receptors that signal in the absence of a ligand, by ligand-withdrawal or the activity of a constitutively active receptor. The pathway ends with regulation of a downstream cellular process, e.g. transcription. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of LotjaGi5g1v0048500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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