Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
Field | Value |
---|---|
Gene ID | LotjaGi5g1v0048500 |
Transcript ID | LotjaGi5g1v0048500.3 |
Related isoforms 3 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | G-protein coupled receptor 1; TAIR: AT1G48270.1 G-protein-coupled receptor 1; Swiss-Prot: sp|O04714|GCR1_ARATH G-protein coupled receptor 1; TrEMBL-Plants: tr|B6GV49|B6GV49_LOTJA Putative G-protein coupled receptor; Found in the gene: LotjaGi5g1v0048500 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:8122896..8130573) extracted from Lotus japonicus Gifu genome v1.2.
GAAAAACCGTTTTCCTTTCACCTCTTTTCTTCCCAATCCCGTATAACTGGGAACTGAGAACTAACAGCGTGATCGGCGAT CGCGAACTCGTTCTGTTCATGGCAACCTCCGCCGCCATCGGCGGCGCACTCACGGCGCACGATCGCTGGATTCTTACGGC GGTGAACGCCGGAGCATCGAGCCTGTCGTTGGCTGGGTCCAGCTTCATTGTACTCTGTTACCTCCTCTTCAAGGAGCTCC GCAAGTTCTCCTTCAAGCTCGTTTTCTACCTCGCCCTCTCTGTATGCATCATTTTTCTTCGCTTCCATATTTATCTTCTT CAGATCTAAAACCCTACGTTTAAATATTGCTTCAACTTTTTCATTTGTCACTTTAACTCTTCGCACAGTTCTTATCTCTT TCAATTGAAATTACTGCATTGTCGATTTCACATTCTTGTTGTTCTTGTTGTTTTTGGTTGCATCATGTTGCTGCTTCTCA TGAATGTAATCAATCAATTTGATTTTAGAACGAATAAGCATAAAACCACTGTTTTGAGCTTTCTCAATTAGGTATTCATC GCTCTGAAGATAGGTTAGCTTCTACTGTAGTTCTAACCAGTGTTGTTAATCACGGATCGAGGAAAATAGCGGAAAGCGAA AAATCCGCTATTTCAAGTCCACATAGCGGAAAAATAGCGGACAATAGGGGAAAATAGCAGAATAGCGGTGAGCCCTCAGA GTGCTATGTTATAGCGCCGCTATAACCGCTATTTGACCACACTGTAATCTAACTAGCAGTCTAATGCTCAAGAATGAACC TAAGCTTAAGTCAGTCCCAGTTCATTTGGGGACTGCTTGATCCAGATTTTGATCTCAGTAAGGCAGTTTTGCTTCTTCTT TAGCCTAATTTCGCACGCCAGGTGAATTTAGACTACTCTGTAAAACAATATTAATAATAATAATAATAATAATTATAATA ACAGTTAGGACTTAGGAGTCTAGATATCCTTTAGTATGTTTAAGAATATAACTTATACCTAGTGAGCTTGTAAATAGAGT ATGCTTATCAATGGAATTTAGATGTTGTGAAACTATTACTAACTCATTATTTACAGTAGAAGTTACCTTTGCTGATGAAA ACTTTTAGATTACTAGTAAACGTTTGAAGTCATGAAACCAACTTTTGTTGGTTTTTTTTTACCCTAGCCACTTTAATTTG TATTTGTAATGCTGTTTTACAATTGAGAAGTCGGGGTCCTTCACATCAGAACTATATATGTCTGTTCCTTTGCAATAGGT GGTCAGTTATTACATTGTTTTTTCTTTGTTTCCTCTTCTGAGTCATAATGCTCTGTTATCATTTATTGCCTGTTGCAGGA TATGCTTTGCAGTTTCTTCAACGTAATAGGGTATATTCGCTAGATCAACCCCCATCTTCTTTAAATGTATGTATCAACTG AAGCTGTTCATCTTGTGATTGATAGAAGTTACATTTTTATACAGGGACCCATCCCAAGGTTTCTTTTGTTATGCTCAGGG ATATAGCACACATTTCTTTTGTGTGGCGTCTTTCCTATGGACTACAACTATTGCATTTACCCTACACCGTACTGTTGTAA AACACAAAACAGATGTTGAAGATTTGGAGGCCATGTTTCACTTGTATGTTTGGGGTATGCATCTATGAATGACCAGCTTT TTATATTCTAGCTGTAGAAATGGCCTATTTTTGCAGTAATCTACAAGTCCTGTAACTTCCGATCCCTTGAATTCTAACTT CAAAATGAATTTTTGGAGCAAATTAATGATGAGATCATAAGAAGTGATGTGAACATTGATTATAGCTCAAAATAACATGA TTTAGCCTGAAAGGTAAAAACAATCAGCTCATGCATGGTCTATGGCCCAAACTCCTTAATTTGAGTGTTTATGGCTCAAA ACCCCCTCAATAGCTCTATCTTAGGCCCAAATGATGGTGAGGACGTGATTGAGCTCAAATTCTGATGGAGAGGCTTTGTT TAGCCCAAGTGTCTTAAACATGTCCATTTAGTGCTTCTTTAATCCTCTTAGCCCTTGCTCTTTTAATTTGTCCACTAGAT ATTTGCAATGCATCCTTCAAGAGCTTGAATTAGATTGTCCAATCCTTAATTAACATCACTTCTTATGATCTCATCAATTA ATGTTGGTGGAATGGCTTCGATAATGTACGAAGAGTAGGGCTTTTAACTTCTGTCTTAATTTCAAGCATTTTATTAGCAA CATTTAGAGAGCTCATTTGATGTACTTTTTGACTTTTCATAGGTACATCCCTTGTTATGACAGTTATGCGCTCCTTTGGT AATGACCATAAGCATTTTGGTGCCTGGTGTTGGACTCAAACAGGTCGCACAGGGAAGGCAAGTAGTCTTAGGACTACAGG TTACATATTGTTTATGTAATTCCTGAAAATTTCTTTGAAGTTTCAACTTCCGCTTTGTTTCTCTCCTTTTACATATGATA TAGAATGTGTTTTGATTCATTAAAAGAGGAACTTGCACTGGGGACCAGTTTTCTGCACTTTTAAATCTAAAAATTAAACA TAAATTGACTTTAAGATAATTTTAGTTGACTTTATTTAAAGCATGGACGTTGTCTTTCATAACTGTAGCAGGGGGTAAGT TGTTGGTTTCTGGGATTTATTTGTAATTACAATTTGTTCTAAGTTATACTGTTATAGTAAAAAATAAAACATTATGCTTT CAGGAAATGATACAAAGACACTAAGTAGGGAATCCCCTTTACTTTAATGATTTAGTATCTCAATTATGTTTGTCAGTCTC TCTCTTAATATTTTTTTTATCTGGGAAATTTGACATCCCATAAATGCAAATGGTCTGGAAATTAAAGTAAGCACTTGGTT GCCGATGAGAAGAATGTTATCCATGTTGCAATTTTTGTTCTTCAAAATCAAATATGTAGTTATTAACAGGAAAGGAAGCT AAGGTTAACAGCTAATAAAAATCCATGCAAGAAAATTGTGCAGGCCATTAAAAAAGTTCTTACAGCATTCTATCCACGTA TTTGTTGAGGGCTTAGGATGTTTCTCATAATGGCATTATTGGTTATCCTAAAGAAGACTGGTAGTAATGAATATTAGAAA GAAATCTGGATAACAACAGATACCTCCCAATTTTCTGCAACTTTGGATTGCATATCTACTTCATTTTTCGTATGTATTTT GTTTATCAAAATAATCTGCTCATTTTTCTATTTCTCCTTATCCATTATAAACAAGTACCTTTTCCTGTGCAGGCAATTCA TTTTATAACATTTTACATGCCACTTTGGGGTGCAATTCTATATAATGGGTTTACATACTTGCAAGTGATACGCATGCTGA ATAACGCAACCCGTGTATGTATCTATCTTTGTTGCTTTTTCCGAAGACAAAAATGTGCTTAGGTGACTTGTGTGACCTCA TCTATCATTTCTTGGCAAATTTCAGATGGCAGTTGGCATGTCAGGTCAAGCTTATGTCTCAGATACAAGAGATAACATGA GGGTATTTTATCTTGTTTTTTTTATGTTTCTGTTAGAATATATAAAACATACGTCATAATATTAACATTTTATCTTTAGA ACATTTTAGAGTACCTTAGTTACCTAAGGTTTATTTCCATATTTCCTTAAATTTCATAATTTGTTTATGATATGTATTAG AATTAAGAATATATTACAAGTATATATAGATATTAGTTTTTTGTGTTTTGTAACTATTAGAATTTGGGAGGCCTAACTCA TCCCTAAAGCTAGCTCAAGAGTTGAGAGTTGCTCTACCCTTTATAATTACTTGTTTGGCCATATCTCTAGCCAATGTGGG ACTTCTAACACACCCCCTCACGCCCAGGGCTGACATCTGGACTTCTAATAACTAACCTTTTCTTTCATATTTGACATTTT ACGTTCTGCATTGTGGGATATTTATTGTGATATACTGTTTCTGTTCAAATGCCTTATTGATCACTCTGAGGCAGGATTGT TTTGGAATTCAAGTAAATTTTCATAGATGCTTCTCACATATTTTCATGGGAAAATATTAAAATTAATACATTGTTCTGTG ATTTCTAATGTGGTTTAGAGATTGATAAGAACCTTGGGAGAACCACACCACAAAAGCTAGCTGTTGTAGTTGGAGAGCCC AAGGCCTTATAAACCCCACATTAGAATCCCATACTTCCAATGTGGGACTCAAGTCCCATACCTTGCAATGGGGTCCTAAC ATCCCACCACGCTCCGCAGCCCCGGCGCCCACGCGGGCTGGCTGTGCACTAGCCCCACGACTAGTCCCGGGCGAACACTG CAATGCCGGCGTCACCACCCGCGCCGCTCGTTTGCAGCTCAGAGACATGGTGGAAGGCTCTGATACCATTGATAAGAACC TTGGGAGAACCACACCACAAAAGCTAGCTGTTGTAGTTGGAGAGCCCAAGGCCTTATAAACCCCACATTAGAATCCCATA CTTCCAATGTGGGACTCAAGTCCCATACCTTGCAATGGGGTCCTAACAGAGATGCCCACCCCTTCTTTTTGTCACTCCAG GATTTTCATGAATAAATTATAACCATCCTTAAACCAATTGCTTAAGATGAAATTATAATATCTAGCCTCTATGTTTCCAT TGAACAACACTTAGTATTTTGTGCTTTGCATTGCAGGCTCTGAATCGCTGGGGATACTATCCACTAATTCTAATAGGATC TTGGGCTTTTGGCACTATTAACCGTATTCATGATTTTTTTGACCCCAGCCATAAGATCTTTTGGCTCTCACTTCTTGATG TTGGAACCGCTGCTCTAATGGTATCTACTAGTAACCATACTGTTTTCAGCATTATTTTCCATTCTCTGAATGTTCTATAA CTTATCTGGAAACTTGGCGTGCTTGGCATTCATTGATAAATCCTCCCTATCTTTTGTGATTCCTCCCATCTCCTAGCACC CTCCTATAACATTTTACTTTCTCTAACAATCAGGCATTCTCTTCCCTACTAATATGTGAATGACAAACTAAAAGGCATTA TCTAATTTGTAATGCAGATTCATCTAAACTGAGTTCAGATTTGATGTCATGTGAAACTGTACATCAATTACAACATAGTG AAAAGTACTAATATGTCATCTTGCTAAGCTTTCTCACTTTGTCTACTTACTGCAGGGGCTCTTTAACTCAATTGCATATG GCCTCAATTCTTCTGTTCGACGAGCAATTTGTGAAAGACTGGACAAGTAAGACCTGATTCTGCTCTATCTGCTCTGAGGG ATTTTTTATTAAATTGGATCATCCTAAATTTGTTTCTTTAACTTTCAAGTTGCAATATCCTTCATCACATATTCTGGATT CGACTTGTGCACTCTTGTGGCCAGCCTAATTATGTTCGCCTTACCACCTAGCCTTTTTGTTTTAAAATAATAAAAAAAAG AAGAGAAAAACCTGTTTGATAGAAACAGTTTTGAAAAGCTGTTATTTAAAACAGTTCTATTTTCAGGTTTTAAAACTAAA TCCCAAAACAGCTCAGATATTTTATGTTTTTGTTTTTAGTTTTCATGTTGTATGTCTTTCAACTTTATAAAGCATCTCGT TTAAACAGTTTCTTCCTTTTCTTCTTTTGAATGACAGTTTGTTAAAATTGTTTCTGAAAATAATTTTTAAATTAAAAAAC TTGAGAAGAGAATCAAACAAGCTCTTAGCCAGTCTTTTTTCTCCCTATTCTCCCAACCTCCTCATCTTCTTCACGTTACT GACCCAGTTTGGTGGATTTTATACTATCACACAGGAAAACTGTTAATTAGGTTACTTATCTCATCTTAGCTTGAGAACTT TATGGCCAAGTCTAGGGGCACCCGCACATTTGGTGCCCCTCTGCAAGACATAACATAGACTGTTGGGTAGCTGTTTAAAT GGATGGGTATGGATTTTGACTATGGTTGTATTCTCTGATGAGCCCTTCACACATCACAACCTTTTTAATGTTACCTTGCG TCACACCTTCATGACATTTATTCAAGTTTACCTTGTTTTGTTATCGTTGCTTCTTCGTTCTTGCTTTTTTTTTCCTAGCA CATTAAACTTAAAACAAATGAACAAATTTGCTTCCATGTTTCTGGGTTTCAGGTGCTGGCCAGAGAGACTATACAGATGG CTCCCTAACAAATTTAAGTACAAGAACCTACAACAGGAAAGTGAACTAGTTTCGTTTCAAACTGAAGGTCAGCGATAGTG AAGAGACATATAACATATTGCATCCTCCATACCATATTTTGGCACTTTTCATGGACAAAAGAGCGGGCAGCAATACTTTC CGGCGAATATCATTGCTCTGCTGCTTCATTTACCTGAGTATGATACTGATGATGACCCTTCTTAAACAAATCAGAGGACA GTAAAGTCCATGTTGAATGTGTCTTTGGAAGCTAATTTCCTCAAACTGAAGACCACTTGTGACTGCGGTGCTTTTATTTT TCTCAGAAATGCTCAATGTCTCTCCCTGTGATTCATCATTCGCTGCATGACCTTGTGTGATGTATCATCTATTCCTCATT TCTGCTATAGAATGTTTTCTTAATTTTTAGGTTTGTAGACTAGGTGCACTTTCAGATTGTTACAAATTGCTAACGACTTC CCATTTTTTGCTGGGCATTTGGTTGACCGCCAGCAATAGAAGTACTTCAGTGTGAAACGCACATGTATAGATCGATTTTG TTTATTCTTTTCTTCCTCTCTGGTCCCTTTGATTCCTACTATTACTTATAGAAGAATGCTAGCAAGACTCTCTTTCCAAA ATTGGTTGAAATTCATATTTTTAATGGTCCTTACTTGAATTTTATCCAATCAATGAGGGTGTTGAAAAGACGGTTAGAAA GAGTGTTAACTAGCATTTTTCAGAAAGAGAGTATTGCTAGAATTTTTCATGTGTACAATAAGCAAACAGAAGGTCTTAAA GTTTGTAACCGGAGAGACAAGAGTCATTATTTCATATCTGACTAGCAGTGCTCAACGATGTACAAAATCAGAATCAAAAG TTCCTATGTATATAATTTCATTTGATGATTACAACTAGAAACGTTCGTTGCCACAAAATTACACACCACAAAACATGTTC ACAAGTGCTATTTACAGGGTATAAATTACAAGCACACACAACACTAAGCGCATGCACAAGAATCATCAATGTCAACTTCA ACTGCAGCACCGTCTCCACCCTGACACCTGAAGAAGAAGTAACCTAGCATAAGACCCACCACAATAGCCAAAAACACCCC TCCATTGAATGACATTATAGCCAACATCAACAAATACCCAACAGCAGAGTCCACCCCGAACAAAACCGCTTCAGCAACCT TACCCCCGGCAACATTGTTCCGCCGCAGAAGTGGCGTCCGTATCTCCGCCCCCGGAGACTCCCCTCTCTTCAGCCGAAAC CGGAGACTCTCTAGATACTGGTAGAAAGCGGAAACCATGAGGCACGCGAGTAAACTGAGAATGTAACTCAGCCATGAATC GGTCTCCCATGAATCTATGAGGAGGGTGACCCTTTTGCTCCAATGCAATGTCATTTTCATCATCTTTTCGCTGTTTGAAA ACTATGCAACTCGGAAAGACAAGGTGTTAGTTAAGATGGAAGTGGTGAGTTTTGGAAACTTTTCAAGAAATTTAAAGG
CDS sequence (LotjaGi5g1v0048500.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAACCTCCGCCGCCATCGGCGGCGCACTCACGGCGCACGATCGCTGGATTCTTACGGCGGTGAACGCCGGAGCATC GAGCCTGTCGTTGGCTGGGTCCAGCTTCATTGTACTCTGTTACCTCCTCTTCAAGGAGCTCCGCAAGTTCTCCTTCAAGC TCGTTTTCTACCTCGCCCTCTCTGATATGCTTTGCAGTTTCTTCAACGTAATAGGGGACCCATCCCAAGGTTTCTTTTGT TATGCTCAGGGATATAGCACACATTTCTTTTGTGTGGCGTCTTTCCTATGGACTACAACTATTGCATTTACCCTACACCG TACTGTTGTAAAACACAAAACAGATGTTGAAGATTTGGAGGCCATGTTTCACTTGTATGTTTGGGGTACATCCCTTGTTA TGACAGTTATGCGCTCCTTTGGTAATGACCATAAGCATTTTGGTGCCTGGTGTTGGACTCAAACAGGTCGCACAGGGAAG GCAATTCATTTTATAACATTTTACATGCCACTTTGGGGTGCAATTCTATATAATGGGTTTACATACTTGCAAGTGATACG CATGCTGAATAACGCAACCCGTATGGCAGTTGGCATGTCAGGTCAAGCTTATGTCTCAGATACAAGAGATAACATGAGGG CTCTGAATCGCTGGGGATACTATCCACTAATTCTAATAGGATCTTGGGCTTTTGGCACTATTAACCGTATTCATGATTTT TTTGACCCCAGCCATAAGATCTTTTGGCTCTCACTTCTTGATGTTGGAACCGCTGCTCTAATGGGGCTCTTTAACTCAAT TGCATATGGCCTCAATTCTTCTGTTCGACGAGCAATTTGTGAAAGACTGGACAAGTGCTGGCCAGAGAGACTATACAGAT GGCTCCCTAACAAATTTAAGTACAAGAACCTACAACAGGAAAGTGAACTAGTTTCGTTTCAAACTGAAGGTCAGCGATAG
Protein sequence (LotjaGi5g1v0048500.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MATSAAIGGALTAHDRWILTAVNAGASSLSLAGSSFIVLCYLLFKELRKFSFKLVFYLALSDMLCSFFNVIGDPSQGFFC YAQGYSTHFFCVASFLWTTTIAFTLHRTVVKHKTDVEDLEAMFHLYVWGTSLVMTVMRSFGNDHKHFGAWCWTQTGRTGK AIHFITFYMPLWGAILYNGFTYLQVIRMLNNATRMAVGMSGQAYVSDTRDNMRALNRWGYYPLILIGSWAFGTINRIHDF FDPSHKIFWLSLLDVGTAALMGLFNSIAYGLNSSVRRAICERLDKCWPERLYRWLPNKFKYKNLQQESELVSFQTEGQR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
Phobius | 1 | 16 | 16 | - | – | |
PANTHER | 9 | 315 | 307 | 3.2E-120 | – | |
PANTHER | 9 | 315 | 307 | 3.2E-120 | – | |
Gene3D | 15 | 294 | 280 | 7.5E-31 | – | |
SUPERFAMILY | 16 | 290 | 275 | 4.03E-15 | – | |
Phobius | 17 | 42 | 26 | - | – | |
PRINTS | 19 | 34 | 16 | 1.8E-123 | ||
ProSiteProfiles | 19 | 273 | 255 | 21.777 | ||
TMHMM | 20 | 42 | 23 | - | – | |
Pfam | 28 | 273 | 246 | 2.5E-13 | – | |
PRINTS | 30 | 48 | 19 | 8.4E-53 | ||
CDD | 36 | 272 | 237 | 9.81623E-24 | – | |
PRINTS | 36 | 50 | 15 | 1.8E-123 | ||
Phobius | 43 | 53 | 11 | - | – | |
PRINTS | 49 | 64 | 16 | 8.4E-53 | ||
PRINTS | 52 | 74 | 23 | 1.8E-123 | ||
Phobius | 54 | 72 | 19 | - | – | |
TMHMM | 54 | 71 | 18 | - | – | |
Phobius | 73 | 83 | 11 | - | – | |
PRINTS | 80 | 98 | 19 | 8.4E-53 | ||
PRINTS | 82 | 95 | 14 | 1.8E-123 | ||
Phobius | 84 | 105 | 22 | - | – | |
TMHMM | 84 | 106 | 23 | - | – | |
PRINTS | 97 | 115 | 19 | 1.8E-123 | ||
Phobius | 106 | 124 | 19 | - | – | |
TMHMM | 119 | 141 | 23 | - | – | |
PRINTS | 120 | 135 | 16 | 1.8E-123 | ||
Phobius | 125 | 141 | 17 | - | – | |
Phobius | 142 | 160 | 19 | - | – | |
PRINTS | 159 | 171 | 13 | 1.8E-123 | ||
Phobius | 161 | 185 | 25 | - | – | |
TMHMM | 161 | 183 | 23 | - | – | |
PRINTS | 172 | 195 | 24 | 1.8E-123 | ||
Phobius | 186 | 217 | 32 | - | – | |
PRINTS | 215 | 236 | 22 | 1.8E-123 | ||
TMHMM | 218 | 237 | 20 | - | – | |
Phobius | 218 | 235 | 18 | - | – | |
PRINTS | 221 | 239 | 19 | 8.4E-53 | ||
Phobius | 236 | 246 | 11 | - | – | |
PRINTS | 245 | 262 | 18 | 1.8E-123 | ||
Phobius | 247 | 269 | 23 | - | – | |
TMHMM | 247 | 269 | 23 | - | – | |
PRINTS | 253 | 272 | 20 | 8.4E-53 | ||
PRINTS | 263 | 279 | 17 | 1.8E-123 | ||
Phobius | 270 | 319 | 50 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Transmembrane signaling receptor activity | Combining with an extracellular or intracellular signal and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity or state as part of signal transduction. | ||
Biological process | Cell surface receptor signaling pathway | A series of molecular signals initiated by activation of a receptor on the surface of a cell. The pathway begins with binding of an extracellular ligand to a cell surface receptor, or for receptors that signal in the absence of a ligand, by ligand-withdrawal or the activity of a constitutively active receptor. The pathway ends with regulation of a downstream cellular process, e.g. transcription. | ||
Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of LotjaGi5g1v0048500.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…