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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0050400 |
| Transcript ID | LotjaGi5g1v0050400.1 |
| Related isoforms 8 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein phosphatase 2c, putative; TAIR: AT4G31750.1 HOPW1-1-interacting 2; Swiss-Prot: sp|Q8RXV3|P2C59_ARATH Probable protein phosphatase 2C 59; TrEMBL-Plants: tr|A0A0R0GC70|A0A0R0GC70_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0050400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:8496584..8502870) extracted from Lotus japonicus Gifu genome v1.2.
AACCATTTTTAACTTCACAAAGAAATTCCAAAAATAACAATAACAAGTAAAAAATCAATTAACAAACACTGCTTATTTCG CTGTCTTTTGATTGATTTATCTTATTAAGGCAAGAAAATTCCTCAAAACGTTTTCCCTTTTTTTCTAAAACAAGATTTCG TTTGAATGAGATGAACTCGATTGTTGTTGGAACAAACAAAACAAAAAATGTGCTCACTTAACCTTAAAAATAAAAAAATT AAATAAAAAAGAAACAGAATCCACCCTGTTTTCTTCTCATTGTTGTAAGTTGTAACTTGATCTCAAATTCTCAATTCACA TCTCTCTCTTCATTGTGTCATGGCATTTCTTGAGGTACTTTCTCTCCCTAGTTTGCTTACTTTTCCATTCCAAATCCTAT TATTTTTCTATATTTTGATTCTGCAGCTTTATTCTGTCACCTGCAATTATAACAAGATCCATGCACAAAGTTTTGTGGCA CTAACTGTGGTTTTTTCCTTGTGGGGTTTCTAATTTTTCTATGCAGATTGAATTTTCTAACAAGACCCCACCCACTTGGG TGTTATGATAACTTGGAACCTTTTGCACGCAAGAATAAGCTTTACACACACAATCCTGCTATTATTTTTCCTTCATTTTT TCGTGCTGGGCAAGGAAATTGTATCTGGGTACCCTGAATATTCAAGCTTTGATATGGGTTACCTCAACTCAGTTTTGTCC TCTTCAAGCCAGGTTCATGCTGCTGAAGATTCACCCGTTAGCGGTGGAGGCCTCAGGTTAATATCCATCTTTTTATAGAT CTAGAATTGTGTTTAATGGTTGCAGTTTTTGTTGTTGGTTAATGTCATTAATACTTTGTAGTTTTGTGTTGATTTAGCTA GACTTCCTTTATATCTTGTGTCTTCAGGTCAATTGAATGAGATGTTTTGACATGGTTTATTATGGTTTGTTTTACAGTCA GAATGGCAAATTCAGCTATGGGTATGCTAGCTCCCCTGGCAAGAGATCCTCAATGGAAGATTTTTATGAGACAAGAATTG ATGGTGTTGAGGGTGAAGTTGTTGGCCTTTTTGGAGTTTTTGATGGTATATTATATTTACACAATTCTCTTATATCCATG CTGCATATTTAAGAAGATTCTAACATGAGGAACTGGTTGTAGTCATACATTGATTGGACACATGATGAACTATTGCCCAC AGTAACGATAAAAATGATGATCTCTTTCTTTATTTTGTTTCTATCCATGGATTTCCCTTTTTAAGTTACCAGGAAATTAA TTATTCCATTTGACTTAGTAGTGCCATATTGTTGAGAGGTCTCACATTGACTAGAAATATGACCAAAATAGTCCTTATCA AGGGTAGAGCAACCCTCACCCCTAAGCTAACTTTTGGGGGTAGAGTTATGCCTAACCTGAATTCTAAGATGATGATATCA GAGCCTATCCGAAATCTCTTTATTGGAGACTACCCATATATGGGCAACCACAGATGTCCAATCCTGCAAAATTTATGCTC CAAATGTCCATCCCTAGGCGTGAGAGGGTGTGTTGAGAAGTCTCACATCGACTAAAGATATGGCCAAAATAGTCCCTGTA AAGGGTAGAATAGCCCTCACCTTTAAGCTATAGCTTTGGGGTAGAGTTAAGCCTAACCCGAATTCTAAGACAGATGAAGA TGCTTGACAATGACATGGACTCATGCATAATGAGGAAGGTCTAGATTTGTTACATTTATGGTCTCATCCTGATCCCCATG TCAGCATATCTGATTTTGGATTGTTTGATTTTTCTGATTCTCTATTGTACTGTTTCCTGAACACAATAAAGGAAATCTCT CTGGAGGTTAATCATCTAAGTAATATGTCTCAGTATTAATTTGATAGGCTTCTCCATTGTCTGGTACTTTCTCTTTCTAG TATTTCTCGTTGTGTTGACGATTTTTCAATAATTCCTTATAAGAGCAATTATGAGTTGCAGACTGTTTATTAATATGGCA TCACAGAGTATTACTTTTTTGCTATTGAAGCATGTAGGAAATATTGATTTTCCATATATAACCTATGCTTGATACTATTC TTGTTTAAAACTTTCAGGTCACGGTGGTGCTCGTGCTGCTGAGTATGTCAAGCAAAACCTATTTAGTAATTTGATCAGTC ACCCAAAGTTTATTTCTGACACCAAATCTGCAATAGGTATGTAGTTTCCTGCATATAGCAGCATGACCTTTTTAGCCTGA TGTTCTCGAATTTGTTTAATCTTGAGAATAACCCTGCTCCTACCCAACTTCTTTTTCCCACAGCTGATGCGTATAACCAT ACGGACTCTGAATTTCTGAAGTCAGAAAATAATCAAAACAGAGATGCTGGATCAACTGCTTCCACTGCCATTCTTGTTGG TGACCGTTTGCTTGTTGCAAATGTTGGAGACTCCAGAGCTGTTATATGCAGGGGCGGAAATGGTAAGGCTAGTAGCTTCA TATTCTTGTATTGTAAACAATGTTGTTAGGATCGGGATCTTACTTAGGATTGGGAGGGGGATGAAAGATCTTAATCGGAG GATCGTAGATTAGATCATAAGATCTCTTCTAGAAATACAAAATTATAGAACATATATATGCATAGAAAATCAAACAAATA AGGTAAACAACCTCTATATCACATCAATAAAGTAAACTTTTAAACTGAAAATTTATTAGCATGAGATCACATAAGTCATA ATATAACTTTTGCATAAGAAACATAAGTTCATAACGTAGAACTTATACTGAAAAACCCAAAAGAACATAATCTAATTGTC CAATTCCACTACGCTACTACTCTAGAACTATTTTTTCTTCAATGGAAACAGCACTAGCAGAGACAAGAACAAATCAGCTC TGTAGGCAGAGGAAAACAGTAGCACTGCATGTGCAGGGTGAAGAATACAGAGGGTCCAAACTTCAAATTTAGAAGTTGGC TCGTAGAATAGAAAGCTTTGACTTTTCCTTATGAAGAAGAATATTGTGGTGAAAGAGGGATGAGGAGGATCACGATTATC ATTCGTTGTGTTAGGTTTTAGTTTTTGGTTGTGGGGTTCGAATTGCGATTTGTAATGGGTGAAAGAGTGGCAAAATCGGA CTGTAAAGCAGGTCTCCCGATTCATGATCCGGAAGCCTAGCAAGAGTGGTAATCGGATTGGATCTAGGATACTACGATCT TACATGAAAGATCACGGTCCTGCTTGCAGTCCTACCTATTCATAATTGCCATCTTGATCGGAGAGCTCTACTTGGATCGC AAGATCGTGCAATCTCACATTCAAAATTGCGATCTTGACAGCATTGATTGTAAATACATTCTTGGTTGTAGTGTATTACA TATATTATTTCACATGATTGTAATTTTCTGATTGCTCAGGAGGTCATAATAATTGTGGTTGTTAAATGTATCTGGAAAAT TTTATGATGCCAGCCCCATGCTTTTTTCTTGGTTCCTGCTGTTGTTTTATGTAGACTAGTGTCATCTCTATTGTGGCTAG AGTCTATTGAAGTTCCTAATATTTGTATTGTGAAAACAAGTTTAAAGGCAGTAACTGTCTTGTGTTTGTCAACTCTGTCG TAATTTTTACAATTGTTTGTCCACTTCTCTCCTTTGATTTTTTTTTTCTTTCCTTCTAACTCTATGTTGAAAGTCTATCT TGGTATAATTCACAGTTAAAATGTTAAGGATTTTCATTTGGTAATAAAAGGGTATGGGGTTGATGCTTTGGTTTATGGCA ATTTATTTTGCATCTGTTGAGAAAATCAATCCAGCCGTCTGATATGAATGATTACTTAACTAATTTAATTTTGTATTTCT GTTTCCTATATAGCCATTGCCGTCTCTCGAGATCACAAACCAGATCAAACTGATGAGAGGCAAAGGATAGAAGATGCTGG GGGCTTTGTTATGTGGGCTGGTGAGTTCATTGAGTAGTTAGCTCTTGTAATTTGATTTCTAGATTGATTTTGTTTATCTC TATGAAATACTTAGTCTTAAACATTACATTTATAGGAACTTGGAGAGTTGGTGGTGTTCTTGCTGTTTCTCGTGCATTTG GTGATAGACTCCTGAAACAGTATGTTGTTGCTGATCCAGAAATTCAGGTTTGTTTCTCATATGGTGACATGCACTCTTGG ATTTTTTTTCAAATATTATTCGCTTCATTTTAATTTGTCTCTGCTGTATAGGACGCATGATCTAATATATGGTTTATAAT GAACAACATCATGTCAATAAATTGAAGAAAATTCTGCCACAAATGACAAGATGAAAAATAATATCACGCTTTTAACATGC TTAACTATCCTAAAACATAAACACAGTTCAGAAAGAACTTCATACATATAGGCTTTTCATTGGAACTACTAATCCCCAGA ATTTCTTATTTCAAGATAAAAATTGACCGATTTGCATGAAGGGTATAGCCATGCATCGGGTTGTAATAGTTACTTGAAAT ATAATATGAAAATATTCATGTGTCTTCACCTAATTGCTTAAGCTTTTGGGATAGTTGGTTCATGACATGGTTTTAGAGCA TCTATGACCAAGTGGGTTTGTACATGGCCCGCGATTCATGTTGAGGGATACTTGCATAGTTGGTTCATGATAATAATATA CATATTTGTCTATGGCATACTTAAATAATTGAAATTCCTAGAACTTGTGAAGGTGAAAAAGTACATTGTAGTGATAGATA TACTTATTCTGCAATTAGCCTTAAACAGTAGCTTTCTTGAGCTTCTTGAAGAAAAATGCTTCTAACCATATGAATTATTT TGTGATGTAACTGGTCTCTACACAAAAGACATTCCTCCTGATTGGTCGTTATTCTTGTTCAACTGGCTTTAGGTCTTTTT TTGGCATCCTTTTTCCTTTGTATATTTTAGTTTTAAAATGGTTGTGGTCTTGCAGGAAGAAAAAGTGGACGGATCTCTTG AGTTTCTTATTTTGGCCAGTGATGGGCTATGGGATGTTGTCTCAAATGAGGTTTGCAATGATTTTCGCTTCTTCCACTTT CTGTTGTCAGTGGTTGAAGTATTTAATGATTTCTTTATTCAAAGTTATTCTCTAGTAAAACCACCTTACATGATTTCCTA TACAAATATTTGAAAGGACAAAATGAAGTGAAAATAAGGTAGCTTTTTGCAATTATTGGTCAAAAAATTGAAATAGGAAG ATAGAGTATTAATCAAAACCCATGAGTTGTATCTTAATAAATATGTAGCTCACCAAATTTAGAAAGCCAAACTCTGAAGT ATTCGTCCATGCTTGAAAACTTTCTACAATTGATTATAAAGCCAGCAATTCTGGGTAGATGTTCGTTGAGTAGCTTATGG GTTACAGAATTGTGTTGCCTAACTCAATTTTTTCATCTTTCTCCAGGAAGCTGTGGCTATGATTAAACCAATTGAGGATG CCGAGGAGGCAGCAAAGAGGCTGATGCAAGAAGCATATCAGAGAGGTAGTTCTGACAACATTACTTGTGTTGTTGTTCGC TTCGTGGTGAACCAAGGCGCTTCATCTCGCAGTACCTCTAGCTAAGTTTCCTTCAATAGAAAGGTAGTGCACAACTGGTT ATGGATCACTGGATCAAAAAAATGTGGCAAAGTCAGTTAATGATTGGTCATAGGCGTTCCTTGTAGCTGTGTACCATGCA AGAAGAATAGAAATCAAAATTTAAACTCATTGTGGTCCTCTAGCATAGAGCTTGCTCATCACCATCATCTCACTTCCATA ATTTGTAGCTAGGAAAAATCGTTGTGTAAGAAGTGTGGCCAGAGTTTTAATTTGCACACTTGGTGGATGTAAATGTGGTT TTAATCTTATTAATCTCCAATTGTAACTTTTACACTCGTTTGTTCTATACATGAATTATGGCTTTTATCAAGTGTAATAC TATAAACTACTATACAATGATTTTTATTGTGAAAATGCTGCTCTAATTTTTTCTTGGTCAATGGACAATGTTCCTCAATT GGGAATTGGGAATTGGGAATACGGGCTCATTTGTAATAGATTTAGAATCCTAATACAGACTAAATTTACATATTTTAATA ATGTGAGACCAAAACCTATGGAAATTTATTGGAGGGACACAAATCAACTCACCCTTATTTTATTGAGACTAAAAGCATAC TTAACATATATTTTAAGTTTTAAATACAATATTCTATTTAAAACCAAAACTATTTTTTTTTGAAAGAAACCAAAACTAAA TTTAAATAAACTTAAAACAAATAAGTAATGAGTACTTAAGCATTCAC
CDS sequence (LotjaGi5g1v0050400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATAACTTGGAACCTTTTGCACGCAAGAATAAGCTTTACACACACAATCCTGCTATTATTTTTCCTTCATTTTTTCGT GCTGGGCAAGGAAATTGTATCTGGGTACCCTGAATATTCAAGCTTTGATATGGGTTACCTCAACTCAGTTTTGTCCTCTT CAAGCCAGGTTCATGCTGCTGAAGATTCACCCGTTAGCGGTGGAGGCCTCAGTCAGAATGGCAAATTCAGCTATGGGTAT GCTAGCTCCCCTGGCAAGAGATCCTCAATGGAAGATTTTTATGAGACAAGAATTGATGGTGTTGAGGGTGAAGTTGTTGG CCTTTTTGGAGTTTTTGATGGTCACGGTGGTGCTCGTGCTGCTGAGTATGTCAAGCAAAACCTATTTAGTAATTTGATCA GTCACCCAAAGTTTATTTCTGACACCAAATCTGCAATAGCTGATGCGTATAACCATACGGACTCTGAATTTCTGAAGTCA GAAAATAATCAAAACAGAGATGCTGGATCAACTGCTTCCACTGCCATTCTTGTTGGTGACCGTTTGCTTGTTGCAAATGT TGGAGACTCCAGAGCTGTTATATGCAGGGGCGGAAATGCCATTGCCGTCTCTCGAGATCACAAACCAGATCAAACTGATG AGAGGCAAAGGATAGAAGATGCTGGGGGCTTTGTTATGTGGGCTGGAACTTGGAGAGTTGGTGGTGTTCTTGCTGTTTCT CGTGCATTTGGTGATAGACTCCTGAAACAGTATGTTGTTGCTGATCCAGAAATTCAGGAAGAAAAAGTGGACGGATCTCT TGAGTTTCTTATTTTGGCCAGTGATGGGCTATGGGATGTTGTCTCAAATGAGGAAGCTGTGGCTATGATTAAACCAATTG AGGATGCCGAGGAGGCAGCAAAGAGGCTGATGCAAGAAGCATATCAGAGAGGTAGTTCTGACAACATTACTTGTGTTGTT GTTCGCTTCGTGGTGAACCAAGGCGCTTCATCTCGCAGTACCTCTAGCTAA
Protein sequence (LotjaGi5g1v0050400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MITWNLLHARISFTHTILLLFFLHFFVLGKEIVSGYPEYSSFDMGYLNSVLSSSSQVHAAEDSPVSGGGLSQNGKFSYGY ASSPGKRSSMEDFYETRIDGVEGEVVGLFGVFDGHGGARAAEYVKQNLFSNLISHPKFISDTKSAIADAYNHTDSEFLKS ENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVS RAFGDRLLKQYVVADPEIQEEKVDGSLEFLILASDGLWDVVSNEEAVAMIKPIEDAEEAAKRLMQEAYQRGSSDNITCVV VRFVVNQGASSRSTSS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 35 | 35 | - | – | |
| SignalP_EUK | 1 | 29 | 29 | - | – | |
| Phobius | 1 | 16 | 16 | - | – | |
| TMHMM | 7 | 29 | 23 | - | – | |
| Phobius | 17 | 28 | 12 | - | – | |
| Phobius | 29 | 35 | 7 | - | – | |
| Phobius | 36 | 336 | 301 | - | – | |
| PANTHER | 44 | 326 | 283 | 3.8E-175 | – | |
| PANTHER | 44 | 326 | 283 | 3.8E-175 | ||
| SMART | 67 | 321 | 255 | 3.1E-99 | ||
| Gene3D | 69 | 328 | 260 | 4.0E-90 | ||
| SUPERFAMILY | 71 | 323 | 253 | 2.75E-80 | ||
| CDD | 76 | 323 | 248 | 6.07484E-97 | ||
| ProSiteProfiles | 77 | 323 | 247 | 58.117 | ||
| SMART | 88 | 323 | 236 | 1.3E-4 | ||
| Pfam | 105 | 316 | 212 | 2.2E-67 | ||
| ProSitePatterns | 108 | 116 | 9 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Protein serine/threonine phosphatase activity | Catalysis of the reaction: protein serine phosphate + H2O = protein serine + phosphate, and protein threonine phosphate + H2O = protein threonine + phosphate. | ||
| Biological process | Protein dephosphorylation | The process of removing one or more phosphoric residues from a protein. | ||
| Molecular function | Cation binding | Interacting selectively and non-covalently with cations, charged atoms or groups of atoms with a net positive charge. |
Expression pattern of LotjaGi5g1v0050400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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