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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0050900 |
| Transcript ID | LotjaGi5g1v0050900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Non-specific serine/threonine protein kinase; TAIR: AT5G10930.1 CBL-interacting protein kinase 5; Swiss-Prot: sp|Q9LEU7|CIPK5_ARATH CBL-interacting serine/threonine-protein kinase 5; TrEMBL-Plants: tr|A0A061GJK6|A0A061GJK6_THECC Non-specific serine/threonine protein kinase; Found in the gene: LotjaGi5g1v0050900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:8589322..8595142) extracted from Lotus japonicus Gifu genome v1.2.
TTTAAAATGAATATGAAATGTCTAGTGAGAGATTATAACTTTTGAATCGTGGGGTAGTTATATTCTCTTTTGATTTTAAT GAAGGTATTCATAGTCGATAGTCGTGAGATAAATTAATTGTTATACGGTCAGCGTACTAAGAGATAATAAGCTGACGAAA GAGTTTTTGATTTTCCATTTATGAAAATTGAGAATCAAACCTTCAATTATTTATTGAAGCGACAAAGTGTAAAACCACTA GGTCAACTCACTTAGTTTTATAAGGACAACGTACATACACATATTTATAAACAAGAAGGTTAATGAAATATTTTTTTTTT TGATACATCGGAAGATTAACAAGTAAATAAAACGAACTAACTAAACCCAATAATGTCCTTCAACAGAAGGACTTCAAGCT CCGGGGAGGGGGTAGCCAACGCACTGTAGCCAGCAACGGGGAGAAGAGACCCTATCTTCGCCAGACAATCTGCTACCATG TTCACGTCTCGACAGCACCAAAAAAGCTCCACTCGCCAGTTCCTTGTCATTAAAGCATGGATTTCACGCAGCACCCACCC ATGGGCATGAAAGCTTGCACGGCTAGGGTCAGCTATCGCATCAATCAATTCTTTGCAGTCAGAGTTGCAAACCAGCTTAC GAGTACCGTTGTCCCAAGCTAACCGGAGACCATCCCTCAACGCGAGCGCCTCAGCAAGGAAGGAGCAGCTAGCAGCTTCC AAATATTGAGATATGAAGCCATTAACCCACTTCCCCGAAGAGTCTCGAAGCACGCCACCACCTCCCATGACAATCGCATC TTCTCTATAGCTCCCGTCACTATTAAGCTTCAAGAACTCTGGAGAAGGAGGTTGCCACCTATCAATGAGAAGGTGATTAT CACTATGAATCAGATCAGGTTCCAAAATGCGAGTTACATCATCATGCTCATGGCATAACCTCCTCCAAGCACAATCCAAC GACCAAGGGTGAGGATCCAATATCATGTTACACCGCCATTTCCAAACGTTCCACAAACCAACCAGAAAACGAGTAGCATG GCTGCCACGAGCCTGGGATTGGATCCAGGATGAGAGTTCCAAATTCCAAAAATCTTTCCAAGCCCAAGCGCCAAGCTTTC CCCAAAGCTCCTTCGAGTGAGGGCAGTCACGCAAACCATGAAGCTCATCTTCACGAGGACCAGAACAACGAGTGCAAGCT TCAGAGGAGGCCAAATTGCAGCGAAAGCGATTAGTGTTGACAGGCAGAGCGTCGTGCAAGCAAAGCCAGACAAAGACACG AATCTTTTCCGGGACAACAAGCTTCCAAACCCACGACCAGTTCTGGACAGCTGCTGGCAATGGTGTGCGATCCCGAAGCC AACGATACCCCTCCCTTACGGTGTACCTTCCATCATTAGTATGGTTCCAAGTAAAAGCTTTGTAGGAGCAATTTTTACTT GATGAAAAAAAAAACACATAATCTTAGTACTCAAGTATATAGTTAGTGAATTTGTTTTCAAATTTAAGTGGGGCAGCTGC CCCATACTCTTCAAGTGCATCCGTCCTTTTGGAAACGTCTATTTCTTAAGAAAAATGGACCCGCACCACCGCTGGGCATA TTTGACAAAATTGAGGAATTTTAGACCCCATTCAACTGATATGCAGTTCCCTTTCAGTTTTTATAATGTTTCTTTTATAA AATAATGCCAATTTATTTATTCATATTATTTCAGTAAACATATTATTTTCATGGGAAATATATAATTAAAAAATTTGCAA AAACTTATGAATTCTCCACTAGTCAAACGGTGCAGCTAAACCGGATGCATCAAATATTATATTATAATTTCAGTAGTTGC TATACCAGAAAATATAAAATAAAATCATTTAAGTCTGATTAGTTCAAAATAACAAATTTATTTTATTTTCAATTTACAAA TATTTAAAGAGCTATTTGTATAAAACAGTGAAAATATTTGTCATAAAATATTATCATTATAAAAGATCTTTTTTATGGTG TAAGAATTAAGAGAGAAAGAGAAATAAAAACAAAGATATATACCGATTATTAAAAGAAATAAAAAGAAAAGGACAAAACA GCCAATGAATTCAGTTAAGACCGCGTCCTAATTCCGTGGGCTTTCAAAGGGAAAGGGAAATCAAAACCACAGGTGCACCA AAGGTAGGCACGGGTCATACCAGCCCTCAATTATTATTATTATTTTTTATTATTATAATCTACAAAATTTAAACTAAAGT GTCTATTACTAAAACAACAAAATTTCAATATTTTATGATAAAAATTTAAAAGTATTGATTTTCTTTTGAAAGTAAAAAGT ATTGATAATAAAACGGAGAGGCCCTTCAAAAAATAAATTAAAACGGAGGAATTTACAAGAAATAATATAGGACTCTCCAT TTAAACGGGGGGGGGGGGGGTGGTTTACAAGAAATAATAGGACTCTCCATTATAAATGACAAATAAGAACCAGCAAGTCT TTGACAAAAAAAAAAAACGAACCAGCAAGTCAATTGAGTAATTGCTTTCCATGGCTACACTATAACACTAACAACCAAGG AAGTTTGCCTAAGAATGTTGGTAGGTGAATAAATAAATAACTAAGAGTTAAATACGGTTTTAGTCTCTCACTTATAAACT TACATGTAATTATCTAAAATGGTAGTATATGAATTCTTTTAATAATTTTTAGTCCTGGAAAAATTGTTCCAACATGCGGA ACACAGTGATTATTGGAAATTCATGAATTATATTAGAGATGTTGCAATATACTCTTTTGTTTGAAATAAGGACATGTGAT GTCATAACGCTTATGTGACAATTTTTTTTCTCAGATCACCGGTCTACATAGAAATCCTAGTCACGTAATGTTCACGTGTA TTTTCACATCAAATTTAATCCTTTAAAATTCTTTTTTATCTTTTTTTTTCTTCTTTCCCCCTCCTCCTCCCATTCTCAAC CACTACCCAATCTCCACCACCCCACAACATCCACATCACTATTCATATTTCTTCTATGTAATTATGCATTTATTTGAGAA TTGTTCTAGTCTTCTCTTAAGTCATAAGGTCTGATGACATTGCAGCCGACCCGGCTTTGTGGGTTTATTCTTAAGCAAAT ACTTTATCACATCATTATTTATAAAAAAATCATATTGGTCAATTGAATTTGTGAGTTAGTTATTTACATGAGTCATTTAA ACAATCCACAACAAACAATTATTTAAACCAATAAAATAAATTAAACAGCTCCACGTCACTAATATATACCACTACGTAAT CCGTCGGCACATTGGAAGATAGCAAAAACCTCCCAGATTCCAGAAGCAACAGGTCGACGATGTAGCCCCACCACTAGTTT TAACGTGTCTTTCCCCCTTGCCCTATAAACCTTGGACCATAATCAAAAATCTATGGGCCAATCTAAACACAACAAATCAA CTACACAAGTGTTTCAATCACCATAAGCCAAACAGCCCCCACTCACTCTCTTATAACTCCAGTCACACCCAACTCATATT CATTCAACACTCTTCTTTGTCCATCATGGACCAACTCCACTCCTTTCAGATACAAGTAAGTAACTAAACAATCATTCAAT ACAATATGGAGGAGATGAAGGAGGACATCCTATTCGGGAAGTACGAGATGGGAAGGGTTTTAGGCAAAGGAACGTTTGCG AAGGTGTACTTCGCGAAGGAAATCACCTCAGGTGAAGGCGTTGCGATCAAAGTCATGAGCAAAGCCCGTATAAAGAAAGA AGGCATGATGGATCAAATCAAACGTGAGATTTCCATAATGCGTTTGGTTAGACACCCAAACATCGTGAACCTCAAGGAAG TCATGGCCACTAAAACCAAAATCTTCTTCATCATGGAGTACATACGTGGCGGCGAGCTATTCGCCAAGGTGGCAAAGGGG AAATTGAAAGAAGATCTCGCCCGTAGATACTTCCAGCAGTTAATCAGCGCCGTCGATTACTGCCACAGCAGAGGTGTGTC CCACCGTGATCTGAAGCCAGAGAATCTACTTCTTGATGAGAATGAAAATCTGAAGGTGTCAGATTTTGGTCTATCCGCCC TGCCGGAACAACTCCGGCAGGACGGGCTACTCCACACCCAGTGTGGAACTCCGGCGTACGTCGCGCCGGAGGTCCTAAGG AAAAAAGGATATGATGGATTCAAAACTGATACCTGGTCTTGTGGTGTTATTCTCTATGCTCTTCTTGCAGGGTGTCTTCC TTTCCAGCATGAGAATCTCATGACCATGTACAACAAGGTTCTCAGAGCAGAGTTTCAGTTTCCGCCATGGTTTTCCCCTG AATCGAAGAAGCTAATCTCGAAGATCCTCGTCGCGGATCCGAATCGACGAATCACGATCTCTTCAATCATGCGCGTCTCG TGGTTCCAGAAAGGATTCTCAGCCTCAATTCCAATTCCAGATCCCGATGAGTCCAATTTCAATTCCGATTTGAATTCCAG TTCTGAACAATCGACCAAGGTTGTGGCTGCTGCGAAATTCATCAACGCGTTCGAGTTCATTTCATCGATGTCTTCTGGTT TCGATCTCTCAGGGTTTTTCGAGGAGAAGAGGAGAGGCGGTTCGGTGTTCACGTCCAAGTGTTCGGTTTCGGAGATCGCG TCGAAGATCGAAGGCGCGGCGAAGGGGTTGAGGTTTCGGGTGGCGAAGGTTAAGGATTTCAAGCTGAGACTGCAGGGGAT GACGGAGGGGAGGAAGGGGAAGCTGGCCGTGACGGCAGAGATTTTAACGGTGGCGCCGGAGCTTGCGGTGGTGGAGTTTT CGAAGTCCGCCGGCGATACCCTGGAATATGTCAAGTTTTGCGAGGAGGATGTGAGGCCAGCGCTGAAAGACATTGTTTGG ACGTGGCAGGGTGAGTAATGCGTGCCACGTGTAATGGTGACGTGGGCCCAGTCATGTGGAGATGGAAGGTTTCGTAAAAT TGAAGTGACAATGGTATATATGAGTGATATTAAAGTAGAGTTAGGTGCTTCTACTTAAGGTAGAGTTAGGTGCTTCTACT TAAGGTACTAACAAATTTTCTCTTTGGTTTTGATTTTTAGTCTTTATTCCATGGGTTGAACTTCACATGGATAGTATTTA GGTGACGCTGGACATAAATTGTCACTACATAGTACATAGGTTAAATTTTAATTGTTGTTCAGTGTTATTATAGCATAAAT TTTGCATATTTTTGTTTAAACTTTTTCATGTTGATGTAGATATGAGAGGATCTTTAGATCTTTATTAGTTTAACATGTAA ATGGATTTGTCCAATTTTAAAAGTGGGCTTTTCACATCTATATATTTCATCAATCTTTTGATGTGATTTTTTTAGTTCTA TTTGAATGTGGCTGTGTGTTGAAATTAATTTTCATGTACAAATTTCTAAATATAGTTATACATGTTTTATATACCATTGA TAGTATGAATGATAGAAAATGTAGAGTGAGATATAAAAATAAGTGAAAATTATATGTGAGAAAGCAAAGTGTGAATGTAT CATTACACATTATTTAAACCTTGTTACTCGTCTAAACATTATTCATCTGCACAGCAATTGGAATTATGATCATAATCGGA TCTAATCTAGCAATACCAAAAATCTACTTCGTGAATGAAAGCCAAGAAATTATCATGTTGATGAAGATGAGTGCTTCATC TATGGAAAAGGTGTGTGACGTTTGTATCGATGAATGATATCAACCTTTACATACGTATATGCTTGCATTCCAATCATTTG ATAAAATGTTTAAATGAGTATATATGAAAATATATAGATTATTGAGCAAACAACGTTTAGC
CDS sequence (LotjaGi5g1v0050900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGGAGATGAAGGAGGACATCCTATTCGGGAAGTACGAGATGGGAAGGGTTTTAGGCAAAGGAACGTTTGCGAAGGT GTACTTCGCGAAGGAAATCACCTCAGGTGAAGGCGTTGCGATCAAAGTCATGAGCAAAGCCCGTATAAAGAAAGAAGGCA TGATGGATCAAATCAAACGTGAGATTTCCATAATGCGTTTGGTTAGACACCCAAACATCGTGAACCTCAAGGAAGTCATG GCCACTAAAACCAAAATCTTCTTCATCATGGAGTACATACGTGGCGGCGAGCTATTCGCCAAGGTGGCAAAGGGGAAATT GAAAGAAGATCTCGCCCGTAGATACTTCCAGCAGTTAATCAGCGCCGTCGATTACTGCCACAGCAGAGGTGTGTCCCACC GTGATCTGAAGCCAGAGAATCTACTTCTTGATGAGAATGAAAATCTGAAGGTGTCAGATTTTGGTCTATCCGCCCTGCCG GAACAACTCCGGCAGGACGGGCTACTCCACACCCAGTGTGGAACTCCGGCGTACGTCGCGCCGGAGGTCCTAAGGAAAAA AGGATATGATGGATTCAAAACTGATACCTGGTCTTGTGGTGTTATTCTCTATGCTCTTCTTGCAGGGTGTCTTCCTTTCC AGCATGAGAATCTCATGACCATGTACAACAAGGTTCTCAGAGCAGAGTTTCAGTTTCCGCCATGGTTTTCCCCTGAATCG AAGAAGCTAATCTCGAAGATCCTCGTCGCGGATCCGAATCGACGAATCACGATCTCTTCAATCATGCGCGTCTCGTGGTT CCAGAAAGGATTCTCAGCCTCAATTCCAATTCCAGATCCCGATGAGTCCAATTTCAATTCCGATTTGAATTCCAGTTCTG AACAATCGACCAAGGTTGTGGCTGCTGCGAAATTCATCAACGCGTTCGAGTTCATTTCATCGATGTCTTCTGGTTTCGAT CTCTCAGGGTTTTTCGAGGAGAAGAGGAGAGGCGGTTCGGTGTTCACGTCCAAGTGTTCGGTTTCGGAGATCGCGTCGAA GATCGAAGGCGCGGCGAAGGGGTTGAGGTTTCGGGTGGCGAAGGTTAAGGATTTCAAGCTGAGACTGCAGGGGATGACGG AGGGGAGGAAGGGGAAGCTGGCCGTGACGGCAGAGATTTTAACGGTGGCGCCGGAGCTTGCGGTGGTGGAGTTTTCGAAG TCCGCCGGCGATACCCTGGAATATGTCAAGTTTTGCGAGGAGGATGTGAGGCCAGCGCTGAAAGACATTGTTTGGACGTG GCAGGGTGAGTAA
Protein sequence (LotjaGi5g1v0050900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEEMKEDILFGKYEMGRVLGKGTFAKVYFAKEITSGEGVAIKVMSKARIKKEGMMDQIKREISIMRLVRHPNIVNLKEVM ATKTKIFFIMEYIRGGELFAKVAKGKLKEDLARRYFQQLISAVDYCHSRGVSHRDLKPENLLLDENENLKVSDFGLSALP EQLRQDGLLHTQCGTPAYVAPEVLRKKGYDGFKTDTWSCGVILYALLAGCLPFQHENLMTMYNKVLRAEFQFPPWFSPES KKLISKILVADPNRRITISSIMRVSWFQKGFSASIPIPDPDESNFNSDLNSSSEQSTKVVAAAKFINAFEFISSMSSGFD LSGFFEEKRRGGSVFTSKCSVSEIASKIEGAAKGLRFRVAKVKDFKLRLQGMTEGRKGKLAVTAEILTVAPELAVVEFSK SAGDTLEYVKFCEEDVRPALKDIVWTWQGE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 4 | 92 | 89 | 1.9E-29 | – | |
| PANTHER | 5 | 430 | 426 | 3.5E-225 | – | |
| PANTHER | 5 | 430 | 426 | 3.5E-225 | – | |
| SUPERFAMILY | 9 | 286 | 278 | 7.15E-91 | ||
| CDD | 12 | 266 | 255 | 6.55386E-168 | – | |
| ProSiteProfiles | 13 | 267 | 255 | 50.887 | ||
| SMART | 13 | 267 | 255 | 8.9E-102 | ||
| Pfam | 13 | 267 | 255 | 6.7E-74 | ||
| ProSitePatterns | 19 | 51 | 33 | - | ||
| Gene3D | 93 | 274 | 182 | 1.1E-64 | – | |
| ProSitePatterns | 131 | 143 | 13 | - | ||
| Gene3D | 301 | 426 | 126 | 7.2E-42 | – | |
| ProSiteProfiles | 301 | 326 | 26 | 12.275 | ||
| Pfam | 304 | 361 | 58 | 9.7E-20 | ||
| CDD | 307 | 421 | 115 | 3.30873E-46 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. | ||
| Biological process | Signal transduction | The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell. |
Expression pattern of LotjaGi5g1v0050900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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