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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0056100 |
| Transcript ID | LotjaGi5g1v0056100.2 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Aspartate aminotransferase; TAIR: AT4G31990.1 aspartate aminotransferase 5; Swiss-Prot: sp|P26563|AATM_LUPAN Aspartate aminotransferase P2, mitochondrial; TrEMBL-Plants: tr|O22618|O22618_LOTCO Aspartate aminotransferase; Found in the gene: LotjaGi5g1v0056100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:9488849..9494741) extracted from Lotus japonicus Gifu genome v1.2.
CTTCGCACTCATCGCCCACAGTTTCGTTCTCTCGGTAACTTGTATCTTCACTTTTTAAAGTGATTCTCGCAATCTTTCTT TAATCTCATCGTTCCCTCCGCAATCCAATTTCGATTCATCCGGTACGCCATTAAACCACTCTGCAACTAGATCCATCACT CTTTCATTTCACTCGAGTTTGGTTGTAACCGTTTCCGTTATTTCTGTTGTGGTCGGTTTGTTTCCGTTGCAGATGGCGGC GTCTTCAGTGTTCTCTGTAGCTTCACACTCTGTTTCGCCTTCGAATCACCATGCTCACAAGGTTCACAAATGCACACACA CTAAACGCATTTTATTGAATGAATTTTTTTTTTTTTTTTGTAATGATTTGATGTTGATTTTGAACAGGGAAAAACCAAGA TTGGAGGTAGCGGTTTGAGATTGGCAAATTCAAGGGTGTGTACTAGCAACTCAGCTTCTCACTTTAATTTCAGTTATTTA TTTATTGCTTTGATTGGTGTGTACTGTGTACTATGATGATTTTGTAATGATATTACTTTATGATCAATAGGGTAGGACTA TTGGTACACTCCATGTTACTTATTCATGCTCTTCACTAACTAACTACGTTTAATTGCGATATGTTAAATGTTTTTGTTGC GATTTAGGATTACCCGGAGTCCGGGAAATCCTAAATTAATGGCCATGGGTAAGGAATCTGAGCAGTTCGATCAAGATTGG ACAGCTTGAATTTTGAGCTTATCTGTGACATCTGATCTTTAATGAAACATATAAGCCGTCTAATCTTGATCAAACAGCTC AGATTACTTAAATGCATTAAATTAAGATTGTCTTGACTGCAGAGAACCCATATGCGTTTTGATGTTGAGGATAAGAGTTT CAAAAGTGATTTTTTTTTTATTTGAAAGAGAGGTGATTGATTATACCTTTGTATTTTCAATGTAATTAATATTAATCTCA CTTTAGTTGTTTTTTTAATTCAATTCAACCGATTATTAATTATAATCCTACTATTGTGTTCATAATTGGCGGAAGAAATT TGTTATAGTTGTCATTAAAAGTAATTCGTAAGGAGTGTGAATAGACAACTAGGAGCGTCAAATTAATTATCTTTTTTGCT GTATCCTAATCTTATGTATGTCAATTTTGGTTCAGTCTTCTGGCAGTGGCCGGATCTCTATGGCTGTTGCTGTTAATGCT TCTCGATTTGAGGGAATACCGATGGCTCCACCTGATCCAATTCTCGGAGTTTCTGAAGCATTTAAAGCGGACAAATGCGA TCTCAAGCTCAATCTTGGAGTTGGGGCCTACAGAACTGAAGAATTACAGCCATATGTGCTTAATGTTGTTAAGAAGGTCC TTTCCTTACTTGATCTGTGTGCAATGATTTGATGTTGTGCTGTTGTCTCCAGTTTGCATAATTCCATAGCATATGTTCAT TCCTAATTTTGCTTCTTGTTTACAAACCTAACACTATTTGTCAATATTTATTTGGATAAAATTCTTATTTTTACAGGCAG AGAATCTTATGCTGAATAGAGGGGAAAACAAAGAGGTAATTTGCTTTTGGTCATATGCCTTTATGTGTGCATAAACCTGT TGACCTTTAGATTATTGACTTGGATTTAACTTATACATGCAGTATCTACCTATTGAGGGTTGGGCTGCATTTAATAAGGC AACTGCAGAGTTGTTACTCGGAGCTGACAACCCAGCAATCAAAGAACAAAGAGTATGTAGTGGATTCAGAAGATGAAGAA GTCTTGTAGGACGTAATATTTGTTGGTCACAAAGAATAGACACAACCAATAATCAAATTCTTTTTTCATTTTTTAATTAT GTTATTCAATTTGCACCCAGGTTGCCACTGTCCAAGGTCTTTCTGGAACTGGTTCTCTGCGACTAGCTGCTGCTCTGATA GAGCGATATTTTCCAGGGGCAAAAGTTTTGATATCATCCCCTACCTGGGGTATGCATCTTATTCCTTTCTCTGTTTAACG TGATCATGATATTTGTATTGAGGGCCGGAATTCATACATCCTGCATAATGTCATGGTCATGCAGGTAATCACAAGAATAT TTTCAATGATGCTAGAGTCCCATGGTCAGAGTACCGATATTATGATCCTAAGACGGTTGGATTGGATTTTGAGGGCATGT TAGAAGATATAAAGGTTACATCCTGATCCAGAATTTGAAAGTAAAACTGAATATGTTTTATACAGACTATGACCAGAATT ATCCTGATCCAGAGTTATGTTAATTGTTTGGATTAGAAATTGACGTGCAAGAATGTTCTAGTTAATATTTTTTCTCTCTC TCAATCATTGTTCTTTGGTCTGCACATTTGTCATCTTTTCGAAAAATATTTGTTAGATATATGAAAACTATCTCAAAGTA TCTTAATTGTACCTTCGACTAATTTAGAATATCTTAAATTATCTCTTGAGTTGGTTTCTTTATTTCCTCACATTTCATTT TTTGTTTCCTTATTTTATTAAGATTACGAGTCTAGTATATGTATAAGTAAGGGTTGGTGTTTTGTCTTATGTAACACATG CAACATATCATCTTATATGAAGTAAGTATCAACTTCAAAGTATTTAGTTTCTGTCCTTTCTTTTTTCCTTTCTCTACACC TAAATGTGATTAAAGCCCCATAATTTCAACACGGTATTAGAGCGGTACCTCTCCATAACCTCTTCTATCACTATTCTACT GTCTAGTTCCCAATAATATAGAGCCTTACTTGACTTTCTTGATTATTTTATTCCTTTTGATTAGTCATCCTCTTGTAGCA TTGTCCCCGGAACCCTCTCTTTATGATTCATCTTTGAAATTTGTTTGTGGGTTTTCTAGACACCACTGCCACTATCCTCA TCATTGCCACATAAGCCAAAAGGTGCCATTTCTTAACTTCGCCACATCACCATTCTGGCAGCCTGTCACCATTTTTTTAC CAATTTTTTGCGCTGCCTGCTTCCATCTTGTGGCAGTTTACACCAGTATCTTGTTTATTGTATATCTTTGTCTGCTGCTT GTTATATTTCTGATAATTGTTATGACTCTTTTCCAGTGCTAGTGTAGCATTAAGAAGGAGAAAGTTAGATCCAGTTTGGC CCTAACTTCTGTCCCAGTCTCCCAGATGCATTAGTCTCAACTTTTGTCTCAGATGCAGTTTGACTCTCTTCTGTATGTAG CTTGGCCTTGCCTTTTGTCCTAACTGAAATCTTGTTGTCATTTTTGTCCTAGATATGATTTGACCATGATCTTTGTCCCA TATGCCAATTGGCTGCGATCTTTGTTCCAAATGAAGCCTGACCTTAGCATTTGTTCCAGATGCAGTCAGGTCCTTGCTTG TGTCCCATATGAAGTATGCCTGCAACTTTTGTCGCTGTTGTATTCTTGTACTGATTTTTGTCCTGGGTGCAATTTAGCTC AGCTTTTGTATCAGATGAATCCAGCTTTTTTTCCCAGACAATATTTGGTCTTGGCTTTTATTACAAATGCAGCTTGGACT TGGCTTTTGTCCTAGTGAAAGTCTCTAGCCAAGTAGCCTGGAGTTTTGTTCTAGATGTAGTCTTGTCCTAACTTTTGTCC TAGATGTAGTATTGCCCTAACTTTCATTCTAGATGAAGTATTTACCCAGCTTTTGTCCCTGATGCAACCTGGCCCCTGTC GGTCTTTGTCCTGGATTTGATCTTGTCCTACTGATCTTCTATTCCAATATATATTGTTTGGTTATTTTTCTTCTTTTAAA GGTTTTATTTATATTCAGTTTAAAGCTTTGTAAGCTTTAGCTTCAAAGGGAATGATAGAATATTTGAAAAATATCTCCCA GCATCTCAGTTTTGTTCTAAGTAATTTAGAGTATTAGATGATCTCTTAAGATTGGTTCCATATTACCTTATGTTTCATAG TCCATTTCGTTATTTAATTAGGATTAAGAGTATAGGACTAGTAGTTTATTTTGTTTCTTTTGTAACAAATCCAACTTATC ATCTCATCAAGTTTGTATTTCTCCTTGTCCTCCCTCTATACCTAAAAGAATAAAACCTTATAAGTTCAACAATATCTTAC CTTTGTAGTGTAATAGTGTTAAATGCATAATTTAGTACTTGTAATTTGAGCATCTTGTAATGAAAGGAGATATAGAGATA TTCTCATTTGATTTGAAGATTAGTCAATTCTGGATAAAACTGACTTCTGCTTAACTGTATGCTTTTACATTTTCTAGTCA GCTCCTGAAGGATCTTTCGTGCTACTTCATGGATGTGCTCATAACCCTACCGGTATTGATCCCACACCAGAACAGTGGGT GAAAATAGCTGATCTAATTCAACAAAAGAACCACATTCCATTTTTTGATGTCGCTTACCAGGTACCGATCTTTGGGTAAA TGAGCTATCATTTTAGTTAATTTCTAGATAGCATATAGCAAAAACCACTTTCATATTTGAAATTTAGACAAATAATCTTT ATAAAAAATGATATGGATACATTTTAAAACGGGTAAATATTGTACTGTCATCTAGAATCTAGGCCACAATATACTAAACC CCTCAATAAATTTTAGGGGTTTGCTAGTGGAAGCCTGGATGAAGATGCTGCTTCTGTGCGATTGTTTGTGTCACGTGGCA TGGAGGTTCTAGTAGCTCAGTCATACAGTAAAAATCTTGGTCTCTATGCTGAAAGGATTGGAGCAATCAATGTCATTTCC TCATCACCAGAATCTGCTGCAAGGTGTGGTAAATTTAGTATGCCATGCTTTCTCATATCTCAAGTTAAATTCACATGTCA AAGAAAAGATTAAATGCTCTATTTCTTCTTCTCAAGCATATTTATTCCTTTTCCAGAAAGGTGCAGGGATTTATCAATTA AGTAGAGATACTAAGAAGTATTTGCAATCTGATACTATATTGTAATGATAGACTCTCTTAACATTGTGACAAAATGTTAA AAGTTTGGTTTTAAGGAATATGTCTTAAGATTCAACTTTATCAGCGAATTATATGCCGCAATAAAATTTGTCTTCATAAA AAGTTTGGTAACAATGTATTTCAGGGTAAAGAGCCAATTGAAAAGGATTGCCAGGCCAATGTACTCTAATCCACCGGTTC ACGGGGCTAGGATTGTTGCTGATATAGTTGGAAATCCAGATCTCTTCAATGAATGGAAAGCAGAGATGGAAATGATGGCA GGAAGGATAAAGAATGTTAGACAGAAGCTATATGATAGTATTTCTTCAAAAGACAAGAGTGGAAAGGATTGGTCATTCAT ACTTGAGCAGATAGGCATGTTCTCATTCACAGGCTTGAACAAGAATCAGGTAATTGACTCCCTTTTCAACTTACTGCTTC AACATGATCTTATTTCGTTGACTCAATCAACATGATATGAACCTGTAATTTTGTTTTGCTATTTTGCAATATTGACTGTG TTGTTCTTGCATGTTATGTTGTGTCTGATCAGAGTGACAATATGACAAATAAGTGGCATGTATACATGACAAAAGATGGA AGGATTTCCCTGGCAGGATTGTCACTGGCCAAATGTGAATACCTTGCAGATGCTATTATTGACTCTTATCATAATGTCAG CTGAAACTGGATGAAATATTCTTTATCACCAAGCTTATATTTTTTGGTGAGTATTGTATCCAATCATAGTGGTCGGCACA CATGACAATAATTCATGTAAACATTAATGTCATACATGTACTTTTAATTCCCTAGGAAATTTTGTAACCTTAAAATAAGT TGAATCAAACTATTGATGCATAATGAGTCTGCTTCTCGGACTTGGAGCAAGTTGGATCAAAGTATTGATTTATAATGAGA CTGTTTCTTTCATATTTCACGTGGGCTTTATCTAATAAAGCATGATTGCAATA
CDS sequence (LotjaGi5g1v0056100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGGCGTCTTCAGTGTTCTCTGTAGCTTCACACTCTGTTTCGCCTTCGAATCACCATGCTCACAAGGGAAAAACCAA GATTGGAGGTAGCGGTTTGAGATTGGCAAATTCAAGGTCTTCTGGCAGTGGCCGGATCTCTATGGCTGTTGCTGTTAATG CTTCTCGATTTGAGGGAATACCGATGGCTCCACCTGATCCAATTCTCGGAGTTTCTGAAGCATTTAAAGCGGACAAATGC GATCTCAAGCTCAATCTTGGAGTTGGGGCCTACAGAACTGAAGAATTACAGCCATATGTGCTTAATGTTGTTAAGAAGGC AGAGAATCTTATGCTGAATAGAGGGGAAAACAAAGAGTATCTACCTATTGAGGGTTGGGCTGCATTTAATAAGGCAACTG CAGAGTTGTTACTCGGAGCTGACAACCCAGCAATCAAAGAACAAAGAGTTGCCACTGTCCAAGGTCTTTCTGGAACTGGT TCTCTGCGACTAGCTGCTGCTCTGATAGAGCGATATTTTCCAGGGGCAAAAGTTTTGATATCATCCCCTACCTGGGGTAA TCACAAGAATATTTTCAATGATGCTAGAGTCCCATGGTCAGAGTACCGATATTATGATCCTAAGACGGTTGGATTGGATT TTGAGGGCATGTTAGAAGATATAAAGTCAGCTCCTGAAGGATCTTTCGTGCTACTTCATGGATGTGCTCATAACCCTACC GGTATTGATCCCACACCAGAACAGTGGGTGAAAATAGCTGATCTAATTCAACAAAAGAACCACATTCCATTTTTTGATGT CGCTTACCAGGGGTTTGCTAGTGGAAGCCTGGATGAAGATGCTGCTTCTGTGCGATTGTTTGTGTCACGTGGCATGGAGG TTCTAGTAGCTCAGTCATACAGTAAAAATCTTGGTCTCTATGCTGAAAGGATTGGAGCAATCAATGTCATTTCCTCATCA CCAGAATCTGCTGCAAGGGTAAAGAGCCAATTGAAAAGGATTGCCAGGCCAATGTACTCTAATCCACCGGTTCACGGGGC TAGGATTGTTGCTGATATAGTTGGAAATCCAGATCTCTTCAATGAATGGAAAGCAGAGATGGAAATGATGGCAGGAAGGA TAAAGAATGTTAGACAGAAGCTATATGATAGTATTTCTTCAAAAGACAAGAGTGGAAAGGATTGGTCATTCATACTTGAG CAGATAGGCATGTTCTCATTCACAGGCTTGAACAAGAATCAGAGTGACAATATGACAAATAAGTGGCATGTATACATGAC AAAAGATGGAAGGATTTCCCTGGCAGGATTGTCACTGGCCAAATGTGAATACCTTGCAGATGCTATTATTGACTCTTATC ATAATGTCAGCTGA
Protein sequence (LotjaGi5g1v0056100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAASSVFSVASHSVSPSNHHAHKGKTKIGGSGLRLANSRSSGSGRISMAVAVNASRFEGIPMAPPDPILGVSEAFKADKC DLKLNLGVGAYRTEELQPYVLNVVKKAENLMLNRGENKEYLPIEGWAAFNKATAELLLGADNPAIKEQRVATVQGLSGTG SLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMLEDIKSAPEGSFVLLHGCAHNPT GIDPTPEQWVKIADLIQQKNHIPFFDVAYQGFASGSLDEDAASVRLFVSRGMEVLVAQSYSKNLGLYAERIGAINVISSS PESAARVKSQLKRIARPMYSNPPVHGARIVADIVGNPDLFNEWKAEMEMMAGRIKNVRQKLYDSISSKDKSGKDWSFILE QIGMFSFTGLNKNQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSYHNVS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 21 | 21 | - | – | |
| MobiDBLite | 13 | 41 | 29 | - | – | |
| PANTHER | 37 | 456 | 420 | 1.7E-276 | – | |
| PANTHER | 37 | 456 | 420 | 1.7E-276 | ||
| SUPERFAMILY | 55 | 451 | 397 | 7.5E-113 | ||
| Gene3D | 60 | 449 | 390 | 5.7E-169 | ||
| Pfam | 83 | 449 | 367 | 1.2E-94 | ||
| CDD | 84 | 449 | 366 | 1.56757E-46 | – | |
| Gene3D | 115 | 356 | 242 | 5.7E-169 | ||
| PRINTS | 230 | 249 | 20 | 1.2E-36 | ||
| PRINTS | 261 | 273 | 13 | 1.2E-36 | ||
| ProSitePatterns | 299 | 312 | 14 | - | ||
| PRINTS | 329 | 354 | 26 | 1.2E-36 | ||
| PRINTS | 398 | 416 | 19 | 1.2E-36 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Biological process | Cellular amino acid metabolic process | The chemical reactions and pathways involving amino acids, carboxylic acids containing one or more amino groups, as carried out by individual cells. | ||
| Molecular function | Transaminase activity | Catalysis of the transfer of an amino group to an acceptor, usually a 2-oxo acid. | ||
| Biological process | Biosynthetic process | The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones. | ||
| Molecular function | Pyridoxal phosphate binding | Interacting selectively and non-covalently with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6. |
Expression pattern of LotjaGi5g1v0056100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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