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LotjaGi5g1v0056100.5

Overview

Field Value
Gene ID LotjaGi5g1v0056100
Transcript ID LotjaGi5g1v0056100.5
Related isoforms 5
Lotus japonicus genome version Gifu v1.2
Description Aspartate aminotransferase; TAIR: AT4G31990.1 aspartate aminotransferase 5; Swiss-Prot: sp|P26563|AATM_LUPAN Aspartate aminotransferase P2, mitochondrial; TrEMBL-Plants: tr|O22618|O22618_LOTCO Aspartate aminotransferase; Found in the gene: LotjaGi5g1v0056100
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr5:9489718..9494452) extracted from Lotus japonicus Gifu genome v1.2.

GATAAGAGTTTCAAAAGTGATTTTTTTTTTATTTGAAAGAGAGGTGATTGATTATACCTTTGTATTTTCAATGTAATTAA TATTAATCTCACTTTAGTTGTTTTTTTAATTCAATTCAACCGATTATTAATTATAATCCTACTATTGTGTTCATAATTGG CGGAAGAAATTTGTTATAGTTGTCATTAAAAGTAATTCGTAAGGAGTGTGAATAGACAACTAGGAGCGTCAAATTAATTA TCTTTTTTGCTGTATCCTAATCTTATGTATGTCAATTTTGGTTCAGTCTTCTGGCAGTGGCCGGATCTCTATGGCTGTTG CTGTTAATGCTTCTCGATTTGAGGGAATACCGATGGCTCCACCTGATCCAATTCTCGGAGTTTCTGAAGCATTTAAAGCG GACAAATGCGATCTCAAGCTCAATCTTGGAGTTGGGGCCTACAGAACTGAAGAATTACAGCCATATGTGCTTAATGTTGT TAAGAAGGTCCTTTCCTTACTTGATCTGTGTGCAATGATTTGATGTTGTGCTGTTGTCTCCAGTTTGCATAATTCCATAG CATATGTTCATTCCTAATTTTGCTTCTTGTTTACAAACCTAACACTATTTGTCAATATTTATTTGGATAAAATTCTTATT TTTACAGGCAGAGAATCTTATGCTGAATAGAGGGGAAAACAAAGAGGTAATTTGCTTTTGGTCATATGCCTTTATGTGTG CATAAACCTGTTGACCTTTAGATTATTGACTTGGATTTAACTTATACATGCAGTATCTACCTATTGAGGGTTGGGCTGCA TTTAATAAGGCAACTGCAGAGTTGTTACTCGGAGCTGACAACCCAGCAATCAAAGAACAAAGAGTATGTAGTGGATTCAG AAGATGAAGAAGTCTTGTAGGACGTAATATTTGTTGGTCACAAAGAATAGACACAACCAATAATCAAATTCTTTTTTCAT TTTTTAATTATGTTATTCAATTTGCACCCAGGTTGCCACTGTCCAAGGTCTTTCTGGAACTGGTTCTCTGCGACTAGCTG CTGCTCTGATAGAGCGATATTTTCCAGGGGCAAAAGTTTTGATATCATCCCCTACCTGGGGTATGCATCTTATTCCTTTC TCTGTTTAACGTGATCATGATATTTGTATTGAGGGCCGGAATTCATACATCCTGCATAATGTCATGGTCATGCAGGTAAT CACAAGAATATTTTCAATGATGCTAGAGTCCCATGGTCAGAGTACCGATATTATGATCCTAAGACGGTTGGATTGGATTT TGAGGGCATGTTAGAAGATATAAAGGTTACATCCTGATCCAGAATTTGAAAGTAAAACTGAATATGTTTTATACAGACTA TGACCAGAATTATCCTGATCCAGAGTTATGTTAATTGTTTGGATTAGAAATTGACGTGCAAGAATGTTCTAGTTAATATT TTTTCTCTCTCTCAATCATTGTTCTTTGGTCTGCACATTTGTCATCTTTTCGAAAAATATTTGTTAGATATATGAAAACT ATCTCAAAGTATCTTAATTGTACCTTCGACTAATTTAGAATATCTTAAATTATCTCTTGAGTTGGTTTCTTTATTTCCTC ACATTTCATTTTTTGTTTCCTTATTTTATTAAGATTACGAGTCTAGTATATGTATAAGTAAGGGTTGGTGTTTTGTCTTA TGTAACACATGCAACATATCATCTTATATGAAGTAAGTATCAACTTCAAAGTATTTAGTTTCTGTCCTTTCTTTTTTCCT TTCTCTACACCTAAATGTGATTAAAGCCCCATAATTTCAACACGGTATTAGAGCGGTACCTCTCCATAACCTCTTCTATC ACTATTCTACTGTCTAGTTCCCAATAATATAGAGCCTTACTTGACTTTCTTGATTATTTTATTCCTTTTGATTAGTCATC CTCTTGTAGCATTGTCCCCGGAACCCTCTCTTTATGATTCATCTTTGAAATTTGTTTGTGGGTTTTCTAGACACCACTGC CACTATCCTCATCATTGCCACATAAGCCAAAAGGTGCCATTTCTTAACTTCGCCACATCACCATTCTGGCAGCCTGTCAC CATTTTTTTACCAATTTTTTGCGCTGCCTGCTTCCATCTTGTGGCAGTTTACACCAGTATCTTGTTTATTGTATATCTTT GTCTGCTGCTTGTTATATTTCTGATAATTGTTATGACTCTTTTCCAGTGCTAGTGTAGCATTAAGAAGGAGAAAGTTAGA TCCAGTTTGGCCCTAACTTCTGTCCCAGTCTCCCAGATGCATTAGTCTCAACTTTTGTCTCAGATGCAGTTTGACTCTCT TCTGTATGTAGCTTGGCCTTGCCTTTTGTCCTAACTGAAATCTTGTTGTCATTTTTGTCCTAGATATGATTTGACCATGA TCTTTGTCCCATATGCCAATTGGCTGCGATCTTTGTTCCAAATGAAGCCTGACCTTAGCATTTGTTCCAGATGCAGTCAG GTCCTTGCTTGTGTCCCATATGAAGTATGCCTGCAACTTTTGTCGCTGTTGTATTCTTGTACTGATTTTTGTCCTGGGTG CAATTTAGCTCAGCTTTTGTATCAGATGAATCCAGCTTTTTTTCCCAGACAATATTTGGTCTTGGCTTTTATTACAAATG CAGCTTGGACTTGGCTTTTGTCCTAGTGAAAGTCTCTAGCCAAGTAGCCTGGAGTTTTGTTCTAGATGTAGTCTTGTCCT AACTTTTGTCCTAGATGTAGTATTGCCCTAACTTTCATTCTAGATGAAGTATTTACCCAGCTTTTGTCCCTGATGCAACC TGGCCCCTGTCGGTCTTTGTCCTGGATTTGATCTTGTCCTACTGATCTTCTATTCCAATATATATTGTTTGGTTATTTTT CTTCTTTTAAAGGTTTTATTTATATTCAGTTTAAAGCTTTGTAAGCTTTAGCTTCAAAGGGAATGATAGAATATTTGAAA AATATCTCCCAGCATCTCAGTTTTGTTCTAAGTAATTTAGAGTATTAGATGATCTCTTAAGATTGGTTCCATATTACCTT ATGTTTCATAGTCCATTTCGTTATTTAATTAGGATTAAGAGTATAGGACTAGTAGTTTATTTTGTTTCTTTTGTAACAAA TCCAACTTATCATCTCATCAAGTTTGTATTTCTCCTTGTCCTCCCTCTATACCTAAAAGAATAAAACCTTATAAGTTCAA CAATATCTTACCTTTGTAGTGTAATAGTGTTAAATGCATAATTTAGTACTTGTAATTTGAGCATCTTGTAATGAAAGGAG ATATAGAGATATTCTCATTTGATTTGAAGATTAGTCAATTCTGGATAAAACTGACTTCTGCTTAACTGTATGCTTTTACA TTTTCTAGTCAGCTCCTGAAGGATCTTTCGTGCTACTTCATGGATGTGCTCATAACCCTACCGGTATTGATCCCACACCA GAACAGTGGGTGAAAATAGCTGATCTAATTCAACAAAAGAACCACATTCCATTTTTTGATGTCGCTTACCAGGTACCGAT CTTTGGGTAAATGAGCTATCATTTTAGTTAATTTCTAGATAGCATATAGCAAAAACCACTTTCATATTTGAAATTTAGAC AAATAATCTTTATAAAAAATGATATGGATACATTTTAAAACGGGTAAATATTGTACTGTCATCTAGAATCTAGGCCACAA TATACTAAACCCCTCAATAAATTTTAGGGGTTTGCTAGTGGAAGCCTGGATGAAGATGCTGCTTCTGTGCGATTGTTTGT GTCACGTGGCATGGAGGTTCTAGTAGCTCAGTCATACAGTAAAAATCTTGGTCTCTATGCTGAAAGGATTGGAGCAATCA ATGTCATTTCCTCATCACCAGAATCTGCTGCAAGGTGTGGTAAATTTAGTATGCCATGCTTTCTCATATCTCAAGTTAAA TTCACATGTCAAAGAAAAGATTAAATGCTCTATTTCTTCTTCTCAAGCATATTTATTCCTTTTCCAGAAAGGTGCAGGGA TTTATCAATTAAGTAGAGATACTAAGAAGTATTTGCAATCTGATACTATATTGTAATGATAGACTCTCTTAACATTGTGA CAAAATGTTAAAAGTTTGGTTTTAAGGAATATGTCTTAAGATTCAACTTTATCAGCGAATTATATGCCGCAATAAAATTT GTCTTCATAAAAAGTTTGGTAACAATGTATTTCAGGGTAAAGAGCCAATTGAAAAGGATTGCCAGGCCAATGTACTCTAA TCCACCGGTTCACGGGGCTAGGATTGTTGCTGATATAGTTGGAAATCCAGATCTCTTCAATGAATGGAAAGCAGAGATGG AAATGATGGCAGGAAGGATAAAGAATGTTAGACAGAAGCTATATGATAGTATTTCTTCAAAAGACAAGAGTGGAAAGGAT TGGTCATTCATACTTGAGCAGATAGGCATGTTCTCATTCACAGGCTTGAACAAGAATCAGGTAATTGACTCCCTTTTCAA CTTACTGCTTCAACATGATCTTATTTCGTTGACTCAATCAACATGATATGAACCTGTAATTTTGTTTTGCTATTTTGCAA TATTGACTGTGTTGTTCTTGCATGTTATGTTGTGTCTGATCAGAGTGACAATATGACAAATAAGTGGCATGTATACATGA CAAAAGATGGAAGGATTTCCCTGGCAGGATTGTCACTGGCCAAATGTGAATACCTTGCAGATGCTATTATTGACTCTTAT CATAATGTCAGCTGA
Download Genomic Sequence

CDS sequence (LotjaGi5g1v0056100.5) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCTGTTGCTGTTAATGCTTCTCGATTTGAGGGAATACCGATGGCTCCACCTGATCCAATTCTCGGAGTTTCTGAAGC ATTTAAAGCGGACAAATGCGATCTCAAGCTCAATCTTGGAGTTGGGGCCTACAGAACTGAAGAATTACAGCCATATGTGC TTAATGTTGTTAAGAAGGCAGAGAATCTTATGCTGAATAGAGGGGAAAACAAAGAGTATCTACCTATTGAGGGTTGGGCT GCATTTAATAAGGCAACTGCAGAGTTGTTACTCGGAGCTGACAACCCAGCAATCAAAGAACAAAGAGTTGCCACTGTCCA AGGTCTTTCTGGAACTGGTTCTCTGCGACTAGCTGCTGCTCTGATAGAGCGATATTTTCCAGGGGCAAAAGTTTTGATAT CATCCCCTACCTGGGGTAATCACAAGAATATTTTCAATGATGCTAGAGTCCCATGGTCAGAGTACCGATATTATGATCCT AAGACGGTTGGATTGGATTTTGAGGGCATGTTAGAAGATATAAAGTCAGCTCCTGAAGGATCTTTCGTGCTACTTCATGG ATGTGCTCATAACCCTACCGGTATTGATCCCACACCAGAACAGTGGGTGAAAATAGCTGATCTAATTCAACAAAAGAACC ACATTCCATTTTTTGATGTCGCTTACCAGGGGTTTGCTAGTGGAAGCCTGGATGAAGATGCTGCTTCTGTGCGATTGTTT GTGTCACGTGGCATGGAGGTTCTAGTAGCTCAGTCATACAGTAAAAATCTTGGTCTCTATGCTGAAAGGATTGGAGCAAT CAATGTCATTTCCTCATCACCAGAATCTGCTGCAAGGGTAAAGAGCCAATTGAAAAGGATTGCCAGGCCAATGTACTCTA ATCCACCGGTTCACGGGGCTAGGATTGTTGCTGATATAGTTGGAAATCCAGATCTCTTCAATGAATGGAAAGCAGAGATG GAAATGATGGCAGGAAGGATAAAGAATGTTAGACAGAAGCTATATGATAGTATTTCTTCAAAAGACAAGAGTGGAAAGGA TTGGTCATTCATACTTGAGCAGATAGGCATGTTCTCATTCACAGGCTTGAACAAGAATCAGAGTGACAATATGACAAATA AGTGGCATGTATACATGACAAAAGATGGAAGGATTTCCCTGGCAGGATTGTCACTGGCCAAATGTGAATACCTTGCAGAT GCTATTATTGACTCTTATCATAATGTCAGCTGA
Download CDS Sequence

Protein sequence (LotjaGi5g1v0056100.5) extracted from Lotus japonicus Gifu v1.2 Proteins.

MAVAVNASRFEGIPMAPPDPILGVSEAFKADKCDLKLNLGVGAYRTEELQPYVLNVVKKAENLMLNRGENKEYLPIEGWA AFNKATAELLLGADNPAIKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDP KTVGLDFEGMLEDIKSAPEGSFVLLHGCAHNPTGIDPTPEQWVKIADLIQQKNHIPFFDVAYQGFASGSLDEDAASVRLF VSRGMEVLVAQSYSKNLGLYAERIGAINVISSSPESAARVKSQLKRIARPMYSNPPVHGARIVADIVGNPDLFNEWKAEM EMMAGRIKNVRQKLYDSISSKDKSGKDWSFILEQIGMFSFTGLNKNQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLAD AIIDSYHNVS
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR11879
1 409 409 8.5E-274
IPR000796
PANTHER
PTHR11879:SF46
1 409 409 8.5E-274 –
SUPERFAMILY
SSF53383
8 404 397 4.91E-113
IPR015424
Gene3D
G3DSA:3.90.1150.10
13 402 390 3.8E-169
IPR015422
Pfam
PF00155
36 402 367 8.4E-95
IPR004839
CDD
cd00609
37 402 366 1.93335E-46 –
Gene3D
G3DSA:3.40.640.10
68 309 242 3.8E-169
IPR015421
PRINTS
PR00799
183 202 20 8.3E-37
IPR000796
PRINTS
PR00799
214 226 13 8.3E-37
IPR000796
ProSitePatterns
PS00105
252 265 14 -
IPR004838
PRINTS
PR00799
282 307 26 8.3E-37
IPR000796
PRINTS
PR00799
351 369 19 8.3E-37
IPR000796

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003824
Molecular function Catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
Subterm of
GO:0006520
Biological process Cellular amino acid metabolic process The chemical reactions and pathways involving amino acids, carboxylic acids containing one or more amino groups, as carried out by individual cells.
Subterm of
GO:0008483
Molecular function Transaminase activity Catalysis of the transfer of an amino group to an acceptor, usually a 2-oxo acid.
Subterm of
GO:0009058
Biological process Biosynthetic process The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.
Subterm of
GO:0030170
Molecular function Pyridoxal phosphate binding Interacting selectively and non-covalently with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi5g1v0056100.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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