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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0057300 |
| Transcript ID | LotjaGi5g1v0057300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Disease resistance protein; TAIR: AT3G14470.1 NB-ARC domain-containing disease resistance protein; Swiss-Prot: sp|Q7XA42|RGA1_SOLBU Putative disease resistance protein RGA1; TrEMBL-Plants: tr|G7K723|G7K723_MEDTR Disease resistance protein RGA4; Found in the gene: LotjaGi5g1v0057300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:9686517..9690283) extracted from Lotus japonicus Gifu genome v1.2.
CTATAGTACAAATTAATAGTTGTCAAGCACAAGTTTGAATCCCTTTATTGCCCTTGGACTCCGTAGCTTAGAGTTCTCTC TTTTAACTGACTCTGCTACTGCTATCCTTGTTTTCACACTTCATCTGCACTTCTTCTCTTTTTAACTTTAGCTTCTCTGA ATATGGCTGAAGCCTTACTTGGAGCTGTGTTTGAGAATTTACTCTCTATGGTTCGAAATGAATTTGCAACCATTTCTGGA ATCAAGGGTAAGGCTGAAAAGCTGTCACGCACTCTAGAACTGATCAAGGCTATTGTAGAAGATGCTGAGGAGAAACAAAT AACTAACCGATCCATAAAGGTATGGCTGCAGCAACTCAAAGATGCTGTTTACATTCTAGATGATATCCTTGATGAATGTT CCATAGAATCCCTTCGACTTGGTGGATTGTCCTCTCTGAAACCAAAGAACATCAAGTTCCGCTATGAGATTGGCAAAAGG CTGAAAGATATTACAAGGAGATTTGATGACATTGCTGAAGGTAAGACCAAGTTCCTTCTACAAGAGGGTGTTAGGGAAAG GCCAGCTGAAGTAGCTGAATGGCGCCAAACCAGCTCAATCATTCCCCAACCTCAAATATATGGACGACAAGATGATAAGG AGAAGATTGTGGAGTTCCTTCTCAGTCAAGAACGCGACTCTGACTTCCTTTCCGTCTATCCCATAGTTGGTTTAGGTGGA ATGGGGAAAACAACACTTTCTCAGATGGTCTACAATGATAATAGGGTGAGTGACAATTTTAACCCAAAGACATGGATTTG CGTTTCTGAGAATTTCTCTGTCAAGAGAATTTGTTGTTCCATTGTAGAATCTGTCACAGGAGAAAAATATGATGCCTTGG GTTTGGATGTAATAGAAAGAAAAGTGCAAACACTGTTACAAAGTAAAAGATATTTGCTGGTTCTGGACGATGTGTGGAAC AGAAATCAAGAAATGGAATTTGGATTAAGTCAAGAGAAATGGAACCAGTTGAAATCTGTTCTGTTGTGTGGATCCAAAGG TTCGTCTGTTTTAGTATCCACTCGTGATATGGATGTTGCAGCAATCATGGGAACATGCCAAGCTCACTGTTTGCGTGGTC TATCTGTGGATGATTGTTGGTTGTTGTTCAAGCAATATGCATTTGGAGCTAACAATGAGGAGCGTGTTGAGCTTGTAGCT ATAGGCAAGGAGATCATAAAAAAGTGTGGGGGATCACCTCTTGCAGCACGAGCATTAGGAGGTCTCTTACACTCAAGGAA TGAGGAAAAGGAATGGGTTGAAGTTAAAGAAAGTAGGCTTTGGAATTTACAAGATGAAAGATGTATTTTTCCTGCCTTGA GGTTGAGCTACTTTCACTTAACTCCAACTTTGAGGCAGTGTTTTGCATTCTGTGCCATATTTCCCAAATATACATTCATC GACAAGGAAGATCTGATCTTTCTTTGGATGGCCAATGGGTTTATCTCATCTAGGGAAAACATGGAGGCAGAACATGTTGG TAATATGATTTGGAATGAATTGTATCAAAAATCATTCTTCCATATTATCCATATAAGTGATGAAGGAGATACTACTTTCA TAATGCATGACCTTGTCCATGATCTTGCTCAATCTATCATGGGGAATGAATGTGTGATTTTGAAGAATGCAAACATGACA GATTTGTCTTCAAGCACACACCATGTTGTTTTAGATCCTAGTTCAGAAAAGTTATCATTCAATAAAGGAACTTTCGAGAA AGTTGAATCTTTACGAACAGTATATCAGCTACAATTTTCCATTAGAGAAATTTCGGCATGCTTCCCAACACACCACGCTC TTAGGGTATTACGGACACGTTCTTTCAATCTATCACGACTCGGGAGTTTAATTCATTTGAGGTATTTGGAGCTTTGTGAT TTTGAGATAAAATCCTTGCCTGACTCAATTTGTAACTTGCGGAAATTGGAAATCTTGAAATTGAAAGAGTTGCGCAAACT TATTTGTCTACCTGAACACTTGGCTTGCTTACAGAATCTGAGACATCTTGTCATTGAAAATTGTGATTCATTGTCATGTA TGTTCCCTAACATTGGAAAATTATCCTGCTTGAGAACATTAAGCGGATACATTGTCAGTTCAAAGATAGGGCATAGCTTG GCAGAATTACATGATTTAAAACTGGGAGGAGAGATGCACATCACAGGCCTCGAAAATTCTGGAAGTTCATATGAAGCTCA AGAGGCCAATTTGAAAGGTAAAGAGGACCTCCGCGAATTATGGTTGACATGGAATAACAAGTTTCATGCTACTAACCCCG ATCAAGTACTTGAAGCGCTTCAACCTCACTCAAATCTTAAGAAGTTGAGAATATATGGCTATGCGGGACTAAAATCTCCG AGCTGGATTGGAATGCTCAACAATTTAGTTGATTTTCAACTTCATCATTGCAATGAATGCTTGCAACTTTCATCGCTTGG TAGACTTCCATCTTTAAGAAAACTTAAATTACGGTATGTGAATAATATCCAGTGTATGGATGATGATGAATCTTACAATG GTGTGGAGGTGAAAGCTTTCCCGTCTTTGGAGCAACTCTCATTATATGATTTACCCAAGTTAGAGATGTTGTTGAAAGTG GAAAGAGGGGAGATGTTTGCCCGTCTTTGTAGTTTGCGAGTTAGAAGGTGTCCTAAACTTGAGTTGCCATCATGCATTCC ATCACTTACAAGCCTCTATTTATGCGAGTATACAAATGAGCTACTGAGGTTTTTCTCCCGTTTCACTGGTATTACCTCCC TCTGCCTTAAGAATGGCCAAGAAGACCTGCCATCCCTCCCAGTAGAATCACTGGCTTGTCTTAAAAATCTGGACATATAT GCTTTCCCAAGATTAAAGGAGTTACCAGGTGAACTCTTCAACAATCTAATCGCTTTGGAGCATCTGGAAATCCGTCGGTG TGATGAGCTCGAGTCTTTGCCAGAGCAAGGTTGGGAAGGTTTTCGCTCCCTTCGAACTCTAGAGTTATATGATTGTAGTG GATTGAGATCCTTGCCGGATGGAATTCAACACCTCAATGCTTTGGAGGACCTGCGAATAGTTCGGTGTGGTGAGTTTGAG TGTTTACCAGAGCAAGGTTGGGAAGGTCTTCGCTCCCTTCGAACTCTCCACTTTTCAAATTGTGAAGGATTGAGATCCTT GCCGGATGGTGTTCGACACCTCACTTCACTTGAGACTCTAACTATTTGGGGATGCCCAACATTGAAGGAGCGGTGTAAAG AAGAAACTGGGGCGGATTGGTACAAGATAGCTCATGTTCCACAACTAGAAATTAAATGATGAAGAAGCAGGCACGTTTTG AAGTGTGCTGACTTATCTTATCTGCTTCTTCCACCACTGCTTTCAATTTGGTAGGATCTCTCTTCCCCCTCCACATTTTT TCTGTTAACTACATTTAGTGTTGGTCAGTATTGCATATTAAAAATATCTTGTACATGTTTGCAGGATGTGGCACTCTTGA TACCATGTGAGAGTGAGTGTTTGGCTTGCTGAATCCATTCAAAACAATGTTAGTGGACAGAGAACTTTTAATCTTCTTCT TCATGACTCTGAAATTATTTTTTCTCATGGTTATGAGGACATGGTAATTAGCGTAAACATGAATATTATTAATAAAGACA TTATTCTTTTTGCTGTAGATTTGAATTTCAATGGGATTTTCTCCCATTTCAATTGTTTTATTCATTTGTTTTATCTGCTT CTAGTCT
CDS sequence (LotjaGi5g1v0057300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGAAGCCTTACTTGGAGCTGTGTTTGAGAATTTACTCTCTATGGTTCGAAATGAATTTGCAACCATTTCTGGAAT CAAGGGTAAGGCTGAAAAGCTGTCACGCACTCTAGAACTGATCAAGGCTATTGTAGAAGATGCTGAGGAGAAACAAATAA CTAACCGATCCATAAAGGTATGGCTGCAGCAACTCAAAGATGCTGTTTACATTCTAGATGATATCCTTGATGAATGTTCC ATAGAATCCCTTCGACTTGGTGGATTGTCCTCTCTGAAACCAAAGAACATCAAGTTCCGCTATGAGATTGGCAAAAGGCT GAAAGATATTACAAGGAGATTTGATGACATTGCTGAAGGTAAGACCAAGTTCCTTCTACAAGAGGGTGTTAGGGAAAGGC CAGCTGAAGTAGCTGAATGGCGCCAAACCAGCTCAATCATTCCCCAACCTCAAATATATGGACGACAAGATGATAAGGAG AAGATTGTGGAGTTCCTTCTCAGTCAAGAACGCGACTCTGACTTCCTTTCCGTCTATCCCATAGTTGGTTTAGGTGGAAT GGGGAAAACAACACTTTCTCAGATGGTCTACAATGATAATAGGGTGAGTGACAATTTTAACCCAAAGACATGGATTTGCG TTTCTGAGAATTTCTCTGTCAAGAGAATTTGTTGTTCCATTGTAGAATCTGTCACAGGAGAAAAATATGATGCCTTGGGT TTGGATGTAATAGAAAGAAAAGTGCAAACACTGTTACAAAGTAAAAGATATTTGCTGGTTCTGGACGATGTGTGGAACAG AAATCAAGAAATGGAATTTGGATTAAGTCAAGAGAAATGGAACCAGTTGAAATCTGTTCTGTTGTGTGGATCCAAAGGTT CGTCTGTTTTAGTATCCACTCGTGATATGGATGTTGCAGCAATCATGGGAACATGCCAAGCTCACTGTTTGCGTGGTCTA TCTGTGGATGATTGTTGGTTGTTGTTCAAGCAATATGCATTTGGAGCTAACAATGAGGAGCGTGTTGAGCTTGTAGCTAT AGGCAAGGAGATCATAAAAAAGTGTGGGGGATCACCTCTTGCAGCACGAGCATTAGGAGGTCTCTTACACTCAAGGAATG AGGAAAAGGAATGGGTTGAAGTTAAAGAAAGTAGGCTTTGGAATTTACAAGATGAAAGATGTATTTTTCCTGCCTTGAGG TTGAGCTACTTTCACTTAACTCCAACTTTGAGGCAGTGTTTTGCATTCTGTGCCATATTTCCCAAATATACATTCATCGA CAAGGAAGATCTGATCTTTCTTTGGATGGCCAATGGGTTTATCTCATCTAGGGAAAACATGGAGGCAGAACATGTTGGTA ATATGATTTGGAATGAATTGTATCAAAAATCATTCTTCCATATTATCCATATAAGTGATGAAGGAGATACTACTTTCATA ATGCATGACCTTGTCCATGATCTTGCTCAATCTATCATGGGGAATGAATGTGTGATTTTGAAGAATGCAAACATGACAGA TTTGTCTTCAAGCACACACCATGTTGTTTTAGATCCTAGTTCAGAAAAGTTATCATTCAATAAAGGAACTTTCGAGAAAG TTGAATCTTTACGAACAGTATATCAGCTACAATTTTCCATTAGAGAAATTTCGGCATGCTTCCCAACACACCACGCTCTT AGGGTATTACGGACACGTTCTTTCAATCTATCACGACTCGGGAGTTTAATTCATTTGAGGTATTTGGAGCTTTGTGATTT TGAGATAAAATCCTTGCCTGACTCAATTTGTAACTTGCGGAAATTGGAAATCTTGAAATTGAAAGAGTTGCGCAAACTTA TTTGTCTACCTGAACACTTGGCTTGCTTACAGAATCTGAGACATCTTGTCATTGAAAATTGTGATTCATTGTCATGTATG TTCCCTAACATTGGAAAATTATCCTGCTTGAGAACATTAAGCGGATACATTGTCAGTTCAAAGATAGGGCATAGCTTGGC AGAATTACATGATTTAAAACTGGGAGGAGAGATGCACATCACAGGCCTCGAAAATTCTGGAAGTTCATATGAAGCTCAAG AGGCCAATTTGAAAGGTAAAGAGGACCTCCGCGAATTATGGTTGACATGGAATAACAAGTTTCATGCTACTAACCCCGAT CAAGTACTTGAAGCGCTTCAACCTCACTCAAATCTTAAGAAGTTGAGAATATATGGCTATGCGGGACTAAAATCTCCGAG CTGGATTGGAATGCTCAACAATTTAGTTGATTTTCAACTTCATCATTGCAATGAATGCTTGCAACTTTCATCGCTTGGTA GACTTCCATCTTTAAGAAAACTTAAATTACGGTATGTGAATAATATCCAGTGTATGGATGATGATGAATCTTACAATGGT GTGGAGGTGAAAGCTTTCCCGTCTTTGGAGCAACTCTCATTATATGATTTACCCAAGTTAGAGATGTTGTTGAAAGTGGA AAGAGGGGAGATGTTTGCCCGTCTTTGTAGTTTGCGAGTTAGAAGGTGTCCTAAACTTGAGTTGCCATCATGCATTCCAT CACTTACAAGCCTCTATTTATGCGAGTATACAAATGAGCTACTGAGGTTTTTCTCCCGTTTCACTGGTATTACCTCCCTC TGCCTTAAGAATGGCCAAGAAGACCTGCCATCCCTCCCAGTAGAATCACTGGCTTGTCTTAAAAATCTGGACATATATGC TTTCCCAAGATTAAAGGAGTTACCAGGTGAACTCTTCAACAATCTAATCGCTTTGGAGCATCTGGAAATCCGTCGGTGTG ATGAGCTCGAGTCTTTGCCAGAGCAAGGTTGGGAAGGTTTTCGCTCCCTTCGAACTCTAGAGTTATATGATTGTAGTGGA TTGAGATCCTTGCCGGATGGAATTCAACACCTCAATGCTTTGGAGGACCTGCGAATAGTTCGGTGTGGTGAGTTTGAGTG TTTACCAGAGCAAGGTTGGGAAGGTCTTCGCTCCCTTCGAACTCTCCACTTTTCAAATTGTGAAGGATTGAGATCCTTGC CGGATGGTGTTCGACACCTCACTTCACTTGAGACTCTAACTATTTGGGGATGCCCAACATTGAAGGAGCGGTGTAAAGAA GAAACTGGGGCGGATTGGTACAAGATAGCTCATGTTCCACAACTAGAAATTAAATGA
Protein sequence (LotjaGi5g1v0057300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAEALLGAVFENLLSMVRNEFATISGIKGKAEKLSRTLELIKAIVEDAEEKQITNRSIKVWLQQLKDAVYILDDILDECS IESLRLGGLSSLKPKNIKFRYEIGKRLKDITRRFDDIAEGKTKFLLQEGVRERPAEVAEWRQTSSIIPQPQIYGRQDDKE KIVEFLLSQERDSDFLSVYPIVGLGGMGKTTLSQMVYNDNRVSDNFNPKTWICVSENFSVKRICCSIVESVTGEKYDALG LDVIERKVQTLLQSKRYLLVLDDVWNRNQEMEFGLSQEKWNQLKSVLLCGSKGSSVLVSTRDMDVAAIMGTCQAHCLRGL SVDDCWLLFKQYAFGANNEERVELVAIGKEIIKKCGGSPLAARALGGLLHSRNEEKEWVEVKESRLWNLQDERCIFPALR LSYFHLTPTLRQCFAFCAIFPKYTFIDKEDLIFLWMANGFISSRENMEAEHVGNMIWNELYQKSFFHIIHISDEGDTTFI MHDLVHDLAQSIMGNECVILKNANMTDLSSSTHHVVLDPSSEKLSFNKGTFEKVESLRTVYQLQFSIREISACFPTHHAL RVLRTRSFNLSRLGSLIHLRYLELCDFEIKSLPDSICNLRKLEILKLKELRKLICLPEHLACLQNLRHLVIENCDSLSCM FPNIGKLSCLRTLSGYIVSSKIGHSLAELHDLKLGGEMHITGLENSGSSYEAQEANLKGKEDLRELWLTWNNKFHATNPD QVLEALQPHSNLKKLRIYGYAGLKSPSWIGMLNNLVDFQLHHCNECLQLSSLGRLPSLRKLKLRYVNNIQCMDDDESYNG VEVKAFPSLEQLSLYDLPKLEMLLKVERGEMFARLCSLRVRRCPKLELPSCIPSLTSLYLCEYTNELLRFFSRFTGITSL CLKNGQEDLPSLPVESLACLKNLDIYAFPRLKELPGELFNNLIALEHLEIRRCDELESLPEQGWEGFRSLRTLELYDCSG LRSLPDGIQHLNALEDLRIVRCGEFECLPEQGWEGLRSLRTLHFSNCEGLRSLPDGVRHLTSLETLTIWGCPTLKERCKE ETGADWYKIAHVPQLEIK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | 2 | 119 | 118 | 6.9445E-18 | ||
| Pfam | 6 | 101 | 96 | 9.0E-23 | ||
| PANTHER | 21 | 796 | 776 | 3.7E-179 | – | |
| PANTHER | 21 | 796 | 776 | 3.7E-179 | – | |
| Coils | 31 | 51 | 21 | - | – | |
| Gene3D | 136 | 314 | 179 | 1.7E-34 | – | |
| SUPERFAMILY | 139 | 417 | 279 | 1.1E-64 | ||
| Pfam | 156 | 383 | 228 | 7.9E-48 | ||
| PRINTS | 178 | 193 | 16 | 5.3E-17 | – | |
| PRINTS | 251 | 265 | 15 | 5.3E-17 | – | |
| PRINTS | 355 | 369 | 15 | 5.3E-17 | – | |
| SUPERFAMILY | 481 | 858 | 378 | 7.14E-29 | – | |
| Gene3D | 521 | 861 | 341 | 2.6E-33 | ||
| SUPERFAMILY | 837 | 1032 | 196 | 1.87E-24 | – | |
| Gene3D | 862 | 1042 | 181 | 1.8E-32 | ||
| PANTHER | 936 | 1038 | 103 | 3.7E-179 | – | |
| PANTHER | 936 | 1038 | 103 | 3.7E-179 | – | |
| PRINTS | 994 | 1010 | 17 | 5.3E-17 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ADP binding | Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate. |
Expression pattern of LotjaGi5g1v0057300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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