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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0062800 |
| Transcript ID | LotjaGi5g1v0062800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Serine/threonine protein phosphatase 2A regulatory subunit B; TAIR: AT5G25510.1 Protein phosphatase 2A regulatory B subunit family protein; Swiss-Prot: sp|Q93YV6|2A5I_ARATH Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' iota isoform; TrEMBL-Plants: tr|G7I6A8|G7I6A8_MEDTR Protein phosphatase 2A regulatory B subunit family protein; Found in the gene: LotjaGi5g1v0062800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:10556396..10560684) extracted from Lotus japonicus Gifu genome v1.2.
TTTTGTTTCTTTTTTAGTTTCATGGTGGTGGATTGTTAATAACACCAAGAAAGAACAGCTAAGAGGGTTCCATCCTTACA CAAAATCTCTCCAGGGCTTCATTGTCTCCATCACCATACACAATCCCCTTGCCCAAAGTTCCTTCTTCTCTAAAATTCAA CCTCAACTTCTTGTTTTTCTCTGTTTATTTTTATTTAATTCCCAATAAAATTTGGAAAATTGTTGAGTATCTGAGATTTG ATTCAGATTTTAATTATCATTTATTGTTCTTCCACCAGCCACAGCCAAAATCATCAAGATTTGATTTTCCACCAATGCTT GCTGCAAAATCGAAAATTTCCTCAAACCCATTTCAAATTGGGATCTCAATTTCACGCGGCATCCCAAATTTCACGGGATT TTTGCTTCTTTCCATGACCAGGATCTAGGGTTTCTACTTTCGCTCGTGATGAAATTAACGTTTTCGGGTTCGCTCTATTT TGATTCTTCTTTTTTGGATTTGATCTAGAAGACTAGAGCATTTGGAATCCTTTGATTTCATCTTCTGGGTCGCAATGCTC AAGCAATCCTTCAACAAGCTTCTCCGGAAGTCGTCGAAACCCGACCCGGACGAGTTGGCTCGGAGCGACTCGTTGCGTTC CACTGACTCGCCACGCACCGCCGGGAGAAGCCAGCGGCCGCCTGGTGGGAGTTCTTCCGCTCGAGCAAACGCCACGAAAC GAGCTTCGTCGTCGGCGGTGTTCCCGGCGAGTATGGTGTCTGGGATAGAGCCTTTGGTGCCGTTTAAGGACGTTCCTAGT GCTGAGAAGATGAACCTGTTTGTGAGCAAGTTGAGTCTTTGTTGTGTGACGTTTGATTTCACTGACCCTGGTAAGAATGT GGCGGATAAAGATGTAAAAAGGAAAACTTTGGTTGAACTTGTTGATTTTGTGGCTTCTGGGTCAATGAGATTTAGTGAGC CTGCTATGTTTGCTATGTGTAGAATGTGTGCTATTAATCTGTTTAGAGTTTTCCCACCTAATTATAGTGCTAACGGGGGC GGTGCCGGTGGTGGTGAGAATGATGATGATGACCCAATGTTTGATCCTTCATGGCCACATTTACAACTTGTGTATGAATT GCTGCTTAAATTTATCTCGTCTTCGTGCCTTGATGCTAAGTTAGCGAAGAAGTATATCGATCATTCGTTTATTTCCAGAT TGCTTGAATTGTTTGAATCGGAGGATCCTAGAGAAAGAGATTGCTTGAAGACAATTCTGCATAGGATTTATGGGAAGTTC ATGGTGCATAGGCCCTTCATTCGCAAATCTATTAACAACATATTTTATCGATTTGTGATTGAGACTGAGAGACACAATGG GATTGGTGAGCTGTTGGAGATTTTTGGGAGTGTGATTAGTGGGTTTGCTTTACCCTTGAAAGAGGAGCACAAAATCTTCT TGTGGAGAGTTTTGATCCCCTTGCACAAGCCTAAATCTATGGGGGTCTACTTTCAGCAATTGTCCTTCTGTGTTACGCAG TTTATAGAAAAGGAGCCAAAGTTAGCAAGCGTTGTGATAAGTGGTTTGTTAAAATATTGGCCAGTAACAAATAGCCAGAA AGAGGTGATGTTTCTGGGTGAACTGGAAGAAATTTTAGAATCAATTAACATGGTAGAGTTCCAGAGGATCATGGTCCAGT TGTTTTGGCGGATTGGGTGCTGCATTAACAGCTTGCACTTTCAGGTACAGTTCTTATGCTTATACTGGATTCATTTTGTT AATCCTCATCATTTACATACTTCTATGTTATTTTCCCACGTGAAAGGATTAGGTCCATGCTCTATAAGTTTTGCATAGTG CTCTCTCTCCACTTCAATTACATGTGCAGACAAGTTTTATTTCTGTCAATGTACATTGTAGTCCTTTTATAGACAAGAAG ATTTTCATTTTCTATGTGTAGTGAAATATTTTAAGAATGAAAATGTAAGCAAATGCTTTGTACGATGTAGCAAATTGGTT TTATAGTACTCTCAACTAGCAAGAAGTTGCACATGTGTGCAATTTGGATTGACTAGTTCTCTGTTGATGATACTACAGGC CAGTTTATTTTCCCCTTTTTGACAGAAGTGCTCGGTCTTAGGTACTCATTTAAGAATGACCGGTACTTGTGGGAATTCCT TACGAGACTACAGTAGTACTTGCTACAGCTTTCATAACCTTAACATGTGTGTCTTGTATGGTTATCTTTTCTCAATAAAA ATTGAAATTAACTGCTTTTATGTGAGGGAGGGAGCATTGAGTCATCTGAAGATTTGCTCATACTTAAGGTTTAAGGTCTA CTAATGGAAAAGATTCTTGATAATCTTAGGTTTTCTCCTATCTTTTTCTATATTTAGGATTTAGGATAGTCTCTCTTGTA GCATTTGTGGCTTACGCGGCTTAGTTGAAAGACAAAACTTAGATATACAATACTGTAGGATCTGATTATCCTGATGCCCA ATGAAAAGCCCTCTTACCCACTTTTTAAATATTTTATTAATGTCATAACTTCCCTCAACATTTTTTTAGTCCACATGTCA TGTTGTAATTGGGAAACTGTAAAAACAACATATATGGAACTGCATCTAAGTTTTGTCCTTAGTTGAATATCCATAGGAGA TCTTTTATCTAATCTACATATTACGATATATTGATATTTCAAAACTGATTTTACTTTTCAGTTTTGATTATCCAAAGGTT TTCTTGGGCTTTAGATTTTTCTTATACTGTTTTCTTAACTGCACTGAATGTGATGTAAGTTGGTAGCTCTGTTATTGCAA TGGAATTGAGTATTATGGTAATAACTGATTTGGTGATTTCAGAAGTTTAAACTTGGATTTTTCAGAAGGTCTTGTGTTTT TCTTATTCAGAAATGAATTATACTCAATGATGGAGTTTGTGGACTTTCATTTTTATGTTTTAACAAACTTCAATGTGGCT TGGGTTGTATGCTTGAAAGATACATTTTGCTTCTGGTTTTGGAGATACATGTTGCAACTTCTGGTGAGAAGTTTATGTGT GCAGTCACCAGGTTGCATTAGTTGAGCCCCTTGTAGAATGTGAAAACAGTTCCTCTCATCATCCTTGGTTCATTTTTGGA AGCTGTACTTGGATCTTTATCGTTTATGGGAATGAGGACAAACATGATTTCTTGTTTTTACAGGGTCTGAAATTTCCTTG TTCCTTGAACCCCCTCTGTATAGGAATCTGTCTATGTTGTGTTTATTGAAATAATAAGTGCTGTATTTTTGTTCTCTTCT TTATGCTTTTGTAACTCTCTTGGGACCTCTCCCCCAAGAGTAGTTTTTGATTCTTCAGCACTTTTGAGAATCAGTTGTTT CCATTGACATGCTTATTAATAATATGAAAATACTTTTCTTTTGTTCAACGCGGATTGTTTCAGGTAGCTGAAAGGGCCCT TTTCTTATGGAACAACGACCACATTGTCAACTTGATTGCGCATAACCGTCAAGTTATCCTGCCCATCATATTTCCAGCTC TAGATAGGAATATTCAAAGCCACTGGAACCCAGCAGTTGTCAACTTAACTCATAATATTAGAAAAATGTTCTTGGAGATG GATGAGAAGCTCTTCATTTCTTGCCATTCTAACTACAAGGAGGAAGAAGTGCTTTTAAGCTCAGCAGCCGAGAAGCGAAA GGAGGCATGGAAACTTCTTGAGCATGCTGCAAGTCTCAAGCCTGTAATTGGAAATACTGCTGTTTTAGTGACTCCTTTGA TGACCTGAATTGCATGCTGGATTCCAAATACACTTTCTCTTGCCTCCTCTTGCTGTGGTGGGAAACCTCAAGAAATGTGC AGTGGCGTTTTGCTTTTTAGATCCTATGTTCTTGTGGTGCTTCTGGCAGCCAGATGTAGTGACATTGTTTTGATTGCCAC TTTGTGGTTCACAATTTGCCTCATGATTAATGTTGAGAAGAACCATGCAGTGGATCAAACGATTTTCTTTATAAGCTTAT TACCAATATCTTCCCACTTTCTGTGTATGTCCTTTCACAGTTCCAAGTTGCATTTTATTACATTTTATCTGGATACCCTG CAATCAAAATTTCCGAAATATTACCTAAAATCACTGCGGTCATAGTTTGGTAGTTGTCGGATTAAGGCCGGATGACTTAG ATTTAAAATGATAATAATCTTACAAATGAAATTGACCTCTTTAAAATTGAACCGTATGTTTAAAGATCAAAAGGATACAG AGCTATGACTGCAGTTTAAAGATCAAAAGGATACAGAGCCATTGGAGAT
CDS sequence (LotjaGi5g1v0062800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTCAAGCAATCCTTCAACAAGCTTCTCCGGAAGTCGTCGAAACCCGACCCGGACGAGTTGGCTCGGAGCGACTCGTT GCGTTCCACTGACTCGCCACGCACCGCCGGGAGAAGCCAGCGGCCGCCTGGTGGGAGTTCTTCCGCTCGAGCAAACGCCA CGAAACGAGCTTCGTCGTCGGCGGTGTTCCCGGCGAGTATGGTGTCTGGGATAGAGCCTTTGGTGCCGTTTAAGGACGTT CCTAGTGCTGAGAAGATGAACCTGTTTGTGAGCAAGTTGAGTCTTTGTTGTGTGACGTTTGATTTCACTGACCCTGGTAA GAATGTGGCGGATAAAGATGTAAAAAGGAAAACTTTGGTTGAACTTGTTGATTTTGTGGCTTCTGGGTCAATGAGATTTA GTGAGCCTGCTATGTTTGCTATGTGTAGAATGTGTGCTATTAATCTGTTTAGAGTTTTCCCACCTAATTATAGTGCTAAC GGGGGCGGTGCCGGTGGTGGTGAGAATGATGATGATGACCCAATGTTTGATCCTTCATGGCCACATTTACAACTTGTGTA TGAATTGCTGCTTAAATTTATCTCGTCTTCGTGCCTTGATGCTAAGTTAGCGAAGAAGTATATCGATCATTCGTTTATTT CCAGATTGCTTGAATTGTTTGAATCGGAGGATCCTAGAGAAAGAGATTGCTTGAAGACAATTCTGCATAGGATTTATGGG AAGTTCATGGTGCATAGGCCCTTCATTCGCAAATCTATTAACAACATATTTTATCGATTTGTGATTGAGACTGAGAGACA CAATGGGATTGGTGAGCTGTTGGAGATTTTTGGGAGTGTGATTAGTGGGTTTGCTTTACCCTTGAAAGAGGAGCACAAAA TCTTCTTGTGGAGAGTTTTGATCCCCTTGCACAAGCCTAAATCTATGGGGGTCTACTTTCAGCAATTGTCCTTCTGTGTT ACGCAGTTTATAGAAAAGGAGCCAAAGTTAGCAAGCGTTGTGATAAGTGGTTTGTTAAAATATTGGCCAGTAACAAATAG CCAGAAAGAGGTGATGTTTCTGGGTGAACTGGAAGAAATTTTAGAATCAATTAACATGGTAGAGTTCCAGAGGATCATGG TCCAGTTGTTTTGGCGGATTGGGTGCTGCATTAACAGCTTGCACTTTCAGGTAGCTGAAAGGGCCCTTTTCTTATGGAAC AACGACCACATTGTCAACTTGATTGCGCATAACCGTCAAGTTATCCTGCCCATCATATTTCCAGCTCTAGATAGGAATAT TCAAAGCCACTGGAACCCAGCAGTTGTCAACTTAACTCATAATATTAGAAAAATGTTCTTGGAGATGGATGAGAAGCTCT TCATTTCTTGCCATTCTAACTACAAGGAGGAAGAAGTGCTTTTAAGCTCAGCAGCCGAGAAGCGAAAGGAGGCATGGAAA CTTCTTGAGCATGCTGCAAGTCTCAAGCCTGTAATTGGAAATACTGCTGTTTTAGTGACTCCTTTGATGACCTGA
Protein sequence (LotjaGi5g1v0062800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLKQSFNKLLRKSSKPDPDELARSDSLRSTDSPRTAGRSQRPPGGSSSARANATKRASSSAVFPASMVSGIEPLVPFKDV PSAEKMNLFVSKLSLCCVTFDFTDPGKNVADKDVKRKTLVELVDFVASGSMRFSEPAMFAMCRMCAINLFRVFPPNYSAN GGGAGGGENDDDDPMFDPSWPHLQLVYELLLKFISSSCLDAKLAKKYIDHSFISRLLELFESEDPRERDCLKTILHRIYG KFMVHRPFIRKSINNIFYRFVIETERHNGIGELLEIFGSVISGFALPLKEEHKIFLWRVLIPLHKPKSMGVYFQQLSFCV TQFIEKEPKLASVVISGLLKYWPVTNSQKEVMFLGELEEILESINMVEFQRIMVQLFWRIGCCINSLHFQVAERALFLWN NDHIVNLIAHNRQVILPIIFPALDRNIQSHWNPAVVNLTHNIRKMFLEMDEKLFISCHSNYKEEEVLLSSAAEKRKEAWK LLEHAASLKPVIGNTAVLVTPLMT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 56 | 56 | - | – | |
| PANTHER | 1 | 499 | 499 | 0.0 | – | |
| PANTHER | 1 | 499 | 499 | 0.0 | ||
| PIRSF | 3 | 500 | 498 | 4.7E-224 | ||
| MobiDBLite | 10 | 27 | 18 | - | – | |
| MobiDBLite | 28 | 56 | 29 | - | – | |
| Pfam | 76 | 486 | 411 | 3.2E-179 | ||
| Gene3D | 81 | 485 | 405 | 3.1E-174 | ||
| SUPERFAMILY | 87 | 479 | 393 | 3.9E-149 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Protein phosphatase type 2A complex | A protein complex that has protein serine/threonine phosphatase activity that is polycation-stimulated (PCS), being directly stimulated by protamine, polylysine, or histone H1; it constitutes a subclass of several enzymes activated by different histones and polylysine, and consists of catalytic, scaffolding, and regulatory subunits. The catalytic and scaffolding subunits form the core enzyme, and the holoenzyme also includes the regulatory subunit. | ||
| Biological process | Signal transduction | The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell. | ||
| Molecular function | Protein phosphatase regulator activity | Modulates the activity of a protein phosphatase, an enzyme which catalyzes of the removal of a phosphate group from a protein substrate molecule. |
Expression pattern of LotjaGi5g1v0062800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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