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LotjaGi5g1v0066100.1

Overview

Field Value
Gene ID LotjaGi5g1v0066100
Transcript ID LotjaGi5g1v0066100.1
Lotus japonicus genome version Gifu v1.2
Description Plasma membrane ATPase; TAIR: AT2G24520.2 plasma membrane H+-ATPase; Swiss-Prot: sp|Q7XPY2|PMA1_ORYSJ Plasma membrane ATPase; TrEMBL-Plants: tr|V7CSZ4|V7CSZ4_PHAVU Plasma membrane ATPase; Found in the gene: LotjaGi5g1v0066100
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr5:10988824..10994480) extracted from Lotus japonicus Gifu genome v1.2.

CTCAGTTCAACCCCGCCTTCTTTACTCCCTTTGATTAACATCACCTAGTTCAATGCTGAATGTGTTTTTGGTCTGCAATA ATTTTTTAATATGTCTAATATAAGTGTACCCATATCTTTATTTTTTAAAATTCTGGTACCATGCAGTTGTATATGTAACC GTATTAGTGCAACTTCTTAGGTAACAAGTGAATCTCTCGAACCTTGATTGTTGTCGTAGGTTTTCCTTGTAGAGATTTTT TATGGGATTGATGAATATCTGAGCCCGTAATTTTCAAAAAGCTTTGAAACCATGTTCCCTGGAACGATTCCAATTGAGGA TGTGTTTGAGGAGCTGAAATGTTCAAGAGCAGGTCTATCATCGGAGGAGAGTGCCAACCGGCTTCAAGTCTATGGACCAA ACAAATTACAAGAGAAAAAGGTATTTATTTTTTTCTGCATTAATTAGTCATTGAAGTCATTAGATGCATGCACCTATTGA TTTCTTGTGTCATGAAATAGCCATTGAAGTTCTTGGGATTTATGTGGAACCCCTTGTCATGGGTCATGGAAGCTGCTGCT GTAATGGCCATTGCTTTGGCAAATGGAGGAGGAAGGCCTCCAGATTGGCAAGAATTTTTGGGAATCATTGCTTTACTTTT ATTCCACTCCTCGGTGAGTTTCATAGAGGAATTCAATGCTCGCTATGCTGCTGAAGCTCTTATGGCTCGTTTAGCTCCAA AGGCCAAGGTTTTATGCTATCCGCAAACTTATTTTATTCATGTGTGTTCATTATTTATGGTAGCACGGTATTTAGTCGTA AAAAATGACCTCATTATCGATAATGTTCCTCATAATCTGGTTTTTTTATGGAACTCACTGGGGTAGTGTGATCCATATAG CCGATCTCAATTGGTGAGATAAGGTTTTTGTTGTTTGTGCATTATTTATGGTGCCATCTTTTGTTAATGTTTGTTCAACT ACAAATTTAAGGTTCTGAGAGACGGTCGATGGAGTGAACAAGACACTGCAACTTTAGTACTAGGTGACATTATCAGCATT AAATCGGGGGATATCGTTCCGGCTGATGTGTGTCTTCTCGAGGGAGATCCTTTGAGTGTTGACCAGTCTGTTTTAACTGG GGAATCTCTTCCTGTGACAAAGAATTCCTCTGATAAAGTGTTCTCCGGATCAACTGTTAAGAAGGGTAATATTGAAGCCG TTGTGATTGCTACTGGGGTGCATACTTTTTCTGGGAAAGCAGCTCATCTGGTGGACTGTACTAACCAAGTTGGACACTTT CCGAAAGTGCTCACAGCAATTAGTAATTTCTGCATTTGCTCAATTGCGGTTGGAATAGTCATCGAGCTTATAGTCATGTA TCCGATACAGCACCGCAAGTACAGGGATGGAATTGACAATCTTTTAGTGCTATTGATTGGGGGAATTCCCCATTCCATGC CAACTGTTTTGTTTGTCACTATGGCTATTGGTTCGCACAGTTTTTCCCTGCAAGGTGCGATTATGAAACGAATGACAGCT ATTGAGGAAATGGCAGGGATGGACGTCCTCTGCAGTGATAAAACCGGGACTCTCACTTTGAATAAGCTATGTGTTGATAG AAACTTGATTGAAGTCTTTGCCAAGGGTGTTGAGAAGGAGCATGTTATCCTGCTAGCAGCTAGAGCTTCTAGGACTGAAA ATCAGGATGCCATAGATGCTGCAATTGTCAAGATGCTTGCAGATCCAAAGGAGGTAAATATGCCATAATCTCTCTTTCTT TAATTTCGGTTTCGGACTTTAGATTAAACCTAATTTTACTGTTCTGATTAACCAGTCAAGAGCTGGTATCAGGGAGGTCC ATTTTCTTCAATTCAATTCAGTAGACAAGAGGACTGCTCTAACCTACATTGATTCTGATGGAAGTTGGCATCGAGCTAGC AAAGGGGCACCTGAGCAGGTAACCATCGATTTCGTCGTCACTTTCTTATGATGTCTCTGAAGATGACTAGGCCATGTTTT TCTCCTGTTTTAGATAATCAACCTTTGCAACTGCAAAGAGGATGAGGATGTTAGGAAGAAGGTTCATGAAGTAATTGACA AGTTTGCTGAACGTGGAATTCAGTCTTTAGGTGTTGCAAGACAGGTACTTAAAGGTGATATATGTATAATTTTCTAAATG ATTGTATACCCTTCCTTTATATTGCTTGTATTGCATGATGTATGCAACAGCAAGTACCAGAGAAAACTAAAGATAGTCCT GGTGGACCGTGGCAATTTGTTGGCCTGGTGCCACTGATTGATTTACCCAGACATGATAGTGCTGAAACCATTAGAAGAGC TCTTAACCTTGGAGTGAATGTGAAGATGATTACCGGTAAGACTTGAGGTCATATACTCTTGTAGCTGATACCAAAACTCA AATAATATCCGTAGTTTTGAAATTACTTGTGGTTATTGTCATTGTCTAGGGGATCAGCTTGCCATTGGAAAGGAAATCGG CCGAAGGCTTGGAATGGGAACAAACATATACCCTTCATCTGTATTGCTTGGACAAGACAAGGATGCCTATATTTCAGCTC TTCAGGTTGACGAGTTGATTGAGAAGGCTGATGGATTTGCAGTAGTTTTTCCGGGTAGGTCCTATTTCTGCATATCTATC TATGTGCATGTTAGGTATGATTATGAATATATCATGTCACATTTAATTTGTCAAAGAATTATCTCTTCACTTCATTATTT ATAAGAAAACAATAATGATGACCCATCATCCATTCATTTTTGCTTTCAAATATTTTAAAACATTCTTTACTTGTTTGTAG CTTATTTGAAAGTGTGCAAACTTTTACCATTATCAACAATTCTTATTTCTAACACTTGAAACCTTTTTCTCTCTGTATGA ACTGGTAGAACACAAATATGAAATTATCAAGAGGCTGCAAGAGAGGAAGCATATATGTGGAATGACAGGAGATGGTGTTG ATGATGTCCCTGCATTGAAGAAAGCGGATATTGGAATAGCTGTTGCTGATGCTACAGATGCTGCTAGAAGTGCTTCTGAT ATTGTCCTCACTGACCATGGTTTAAGAGTGATTATTAGTGTAGTGATAACCAGTAGGGAGATTCTTCAGAGGATGAAGAA TTATACTGTGAGTTTCCTTGCATACCTAATTAAACTGTTTCATTTCATTTTAAATGTTCTTAAATCACAAAATGACTTGC TATGGAACAGATTTATGCCGTGTCAATCACTATTCATATGGTGGTAAGTGCTGAATTTAGGTTGAATTGAGAAATGTCAA ATATTTTCTACATACTGGAACAATCTAATCATATGCTTATGTGTTCTATTTTTCATTTTGGTAGTTTGGTTTCTTATTTA TTGCGTTAATCTGGAAGTTTGATTTTGCACCCTTCATGGTTTTGGTTATGGCCTTCCTCAATGATGGTAAGTAAATATTT GCCTGAACTTGATGACTGTTTCGCCAAAATGCTAAAACTGATTTCCTTGCACTACTATACATTTAGGCCCCATTATGGCA TTACCCGGGGATAGAGTGAAACTGAAACCATCACCATTTCCTGAGAGCTGGAAACTGAGGGAGATCTTTGCTACTGGTGT TGTACTTGGCAGTTACTTAGCACTAATGACTGTAATTTTTTTCTGGGTGATGAAAGATACTGACTTCTTCCCGGTAAACA ATTTACATTTCTTGCTTTTTCTCCATGTCGTCACAACCTAACAGAGATTCTAAGTGCTATAAGCTTACACTATTGCAGAA CAAGTTTGGTGTGAGGTCTTTGAGATATAGCTCTGATGAGATGATGGCAGCTTTATATCTACAAGTCAGTATAATAAGCC AGGCCCAAATTTTTGTCTTTAGGTCCCGCAGCTGGTCTTTTGTTGAAAGACCTAGTCTTTTCCTACTAATTACTTTTATG TTTTCTGAACTGGTAAGCTTGAACCTCTTAATATTCTACCACCAATGCTCTCTGTAAAGTGTCTCTGGTAGTTTCTTGTC TGATTTTAGTATTAAGTAGTGCAATTTTATAGCATCTAGAGTGTGTTTGGAATTTTTCGAACTTATCTTATAGAATAAAC ACTTAAGCAAGTGTTTAGTTAAGCTTATAAAAATAGCTAGATAGGATTGGTACCAAGGAAGTGAAAGAATGAAGAAACTA GAGGTATTAGTGAAGAACCCTAATCCCTGACCTGCCCGATGTAGACAGAACTTTGGAAAATAGAGCTAAGAGATACAAAA GGTTGTTCAGACTTTTGGGAGGCTCAACTCTCTCCTATATTGTCCAAACTAACTCTCACTAACGCATTCACACATTAGGT TAGTTAGCTATTATTACATTAACAACCTCTATCCATCGGTTACTATCACATTGCAATCATAACTTATGATCAACCTATAA GCTGTTTTAAGCATATTTTTATGAGTTTCTCATATTAGCTTATGAATATACATACCGATAAGCTCTTTTGAGTTTATTTC AATAAGCTTATAAATGTTTGCAGACATAAGCCCTTAAATAATTTGTTTAATCAAACGCTAAACATTAATAACTATACACT TAGTAATGTCAACAACAACCAAAAAGGAAAGAAAAGAAAATGGGTGGTTAGTCAAACACTCATGACTTCCTCTTGTAGTA ACAATAGTTTGTTATGTAATTACAGCTGACAACTTTGGTAGCAGTATATGCGGACTTGTTCTTTGCAAGAATAACGGGAA TCGGATGGGGTTGGGCTGGTGTAATCTGGCTGTACAGTTTGGTAACCTATATCCCTCTTGATTTTCTCAAATTCGCAATC CGCAATATTCTGAGTGGGAAGGCTTAGGATAATCTTTTGGAGAACAAGGTCGGTTCTTTTCATTTTTTCTTATTATTAAT TTCTTGCATTGTTGATCTAATCATGTTCATGCTCTCTCATATCAGAACGCCTTCACTACAAAGAAAGGTTATGGCAAAGA AGAGAGGGAAGTTCAGTGGGCGGTGGCACAGAGGACACTTCAGAAGCCTCCAATCTTTTCAATGAGAAAAATTGCTATAG GGAGCTTTCAGAGATTGCACAGCAAGCCAAAATACGCGCTGAAGTTGCAAGGTGATAGAGTTAGGCCCGTGAAAGTTATT GGTAGTTTTATAAAATAATTGGTTAACTGTTATTGGCAGTTGTTGGGGAAATTCTTTTGTAACTACTGGGTAATTTCCTT TGTCAGGAGGAAATAGATTTGTTTGAGTGGTATTCTTGAAATTGGGAATAGATTTTGGTGAGTGTTGGTCTCTCGAATAC GAGTAACCATTGTAGTTCCTTTGTTATTCTTGTGTAATAAACAGTTTTCCTTTCATCCATTACTGGTAGTGGTACCTATC ACAAGGTACACCATTAAATTTGTATGACGTCAAGTTATTACTTGAAAATGCTTTCAAGGACATACATTTATATATTGGTA GACATTGAATGAATTATGTGTATTAAAATGATCTCAGGGGAATTGAAAATTATATATTACTGGACATTGAATGAGTTAAA TGTATGAAGTTCCTTTACAATTTCTGAAAATGAGTTACTGGCTTAGGGAGCTTCATACTCTAAAGGGACACGTTGAGTCA GTGGTGAAGCTGAAGGGACTGGCCATTGAAACAACTCAGCAGCACTATACAGTTTAA 

CDS sequence (LotjaGi5g1v0066100.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGTTCCCTGGAACGATTCCAATTGAGGATGTGTTTGAGGAGCTGAAATGTTCAAGAGCAGGTCTATCATCGGAGGAGAG TGCCAACCGGCTTCAAGTCTATGGACCAAACAAATTACAAGAGAAAAAGCCATTGAAGTTCTTGGGATTTATGTGGAACC CCTTGTCATGGGTCATGGAAGCTGCTGCTGTAATGGCCATTGCTTTGGCAAATGGAGGAGGAAGGCCTCCAGATTGGCAA GAATTTTTGGGAATCATTGCTTTACTTTTATTCCACTCCTCGGTGAGTTTCATAGAGGAATTCAATGCTCGCTATGCTGC TGAAGCTCTTATGGCTCGTTTAGCTCCAAAGGCCAAGGTTCTGAGAGACGGTCGATGGAGTGAACAAGACACTGCAACTT TAGTACTAGGTGACATTATCAGCATTAAATCGGGGGATATCGTTCCGGCTGATGTGTGTCTTCTCGAGGGAGATCCTTTG AGTGTTGACCAGTCTGTTTTAACTGGGGAATCTCTTCCTGTGACAAAGAATTCCTCTGATAAAGTGTTCTCCGGATCAAC TGTTAAGAAGGGTAATATTGAAGCCGTTGTGATTGCTACTGGGGTGCATACTTTTTCTGGGAAAGCAGCTCATCTGGTGG ACTGTACTAACCAAGTTGGACACTTTCCGAAAGTGCTCACAGCAATTAGTAATTTCTGCATTTGCTCAATTGCGGTTGGA ATAGTCATCGAGCTTATAGTCATGTATCCGATACAGCACCGCAAGTACAGGGATGGAATTGACAATCTTTTAGTGCTATT GATTGGGGGAATTCCCCATTCCATGCCAACTGTTTTGTTTGTCACTATGGCTATTGGTTCGCACAGTTTTTCCCTGCAAG GTGCGATTATGAAACGAATGACAGCTATTGAGGAAATGGCAGGGATGGACGTCCTCTGCAGTGATAAAACCGGGACTCTC ACTTTGAATAAGCTATGTGTTGATAGAAACTTGATTGAAGTCTTTGCCAAGGGTGTTGAGAAGGAGCATGTTATCCTGCT AGCAGCTAGAGCTTCTAGGACTGAAAATCAGGATGCCATAGATGCTGCAATTGTCAAGATGCTTGCAGATCCAAAGGAGT CAAGAGCTGGTATCAGGGAGGTCCATTTTCTTCAATTCAATTCAGTAGACAAGAGGACTGCTCTAACCTACATTGATTCT GATGGAAGTTGGCATCGAGCTAGCAAAGGGGCACCTGAGCAGATAATCAACCTTTGCAACTGCAAAGAGGATGAGGATGT TAGGAAGAAGGTTCATGAAGTAATTGACAAGTTTGCTGAACGTGGAATTCAGTCTTTAGGTGTTGCAAGACAGCAAGTAC CAGAGAAAACTAAAGATAGTCCTGGTGGACCGTGGCAATTTGTTGGCCTGGTGCCACTGATTGATTTACCCAGACATGAT AGTGCTGAAACCATTAGAAGAGCTCTTAACCTTGGAGTGAATGTGAAGATGATTACCGGGGATCAGCTTGCCATTGGAAA GGAAATCGGCCGAAGGCTTGGAATGGGAACAAACATATACCCTTCATCTGTATTGCTTGGACAAGACAAGGATGCCTATA TTTCAGCTCTTCAGGTTGACGAGTTGATTGAGAAGGCTGATGGATTTGCAGTAGTTTTTCCGGAACACAAATATGAAATT ATCAAGAGGCTGCAAGAGAGGAAGCATATATGTGGAATGACAGGAGATGGTGTTGATGATGTCCCTGCATTGAAGAAAGC GGATATTGGAATAGCTGTTGCTGATGCTACAGATGCTGCTAGAAGTGCTTCTGATATTGTCCTCACTGACCATGGTTTAA GAGTGATTATTAGTGTAGTGATAACCAGTAGGGAGATTCTTCAGAGGATGAAGAATTATACTATTTATGCCGTGTCAATC ACTATTCATATGGTGTTTGGTTTCTTATTTATTGCGTTAATCTGGAAGTTTGATTTTGCACCCTTCATGGTTTTGGTTAT GGCCTTCCTCAATGATGGCCCCATTATGGCATTACCCGGGGATAGAGTGAAACTGAAACCATCACCATTTCCTGAGAGCT GGAAACTGAGGGAGATCTTTGCTACTGGTGTTGTACTTGGCAGTTACTTAGCACTAATGACTGTAATTTTTTTCTGGGTG ATGAAAGATACTGACTTCTTCCCGAACAAGTTTGGTGTGAGGTCTTTGAGATATAGCTCTGATGAGATGATGGCAGCTTT ATATCTACAAGTCAGTATAATAAGCCAGGCCCAAATTTTTGTCTTTAGGTCCCGCAGCTGGTCTTTTGTTGAAAGACCTA GTCTTTTCCTACTAATTACTTTTATGTTTTCTGAACTGCTGACAACTTTGGTAGCAGTATATGCGGACTTGTTCTTTGCA AGAATAACGGGAATCGGATGGGGTTGGGCTGGTGTAATCTGGCTGTACAGTTTGGTAACCTATATCCCTCTTGATTTTCT CAAATTCGCAATCCGCAATATTCTGAGTGGGAAGGCTTAG 

Protein sequence (LotjaGi5g1v0066100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MFPGTIPIEDVFEELKCSRAGLSSEESANRLQVYGPNKLQEKKPLKFLGFMWNPLSWVMEAAAVMAIALANGGGRPPDWQ EFLGIIALLLFHSSVSFIEEFNARYAAEALMARLAPKAKVLRDGRWSEQDTATLVLGDIISIKSGDIVPADVCLLEGDPL SVDQSVLTGESLPVTKNSSDKVFSGSTVKKGNIEAVVIATGVHTFSGKAAHLVDCTNQVGHFPKVLTAISNFCICSIAVG IVIELIVMYPIQHRKYRDGIDNLLVLLIGGIPHSMPTVLFVTMAIGSHSFSLQGAIMKRMTAIEEMAGMDVLCSDKTGTL TLNKLCVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVKMLADPKESRAGIREVHFLQFNSVDKRTALTYIDS DGSWHRASKGAPEQIINLCNCKEDEDVRKKVHEVIDKFAERGIQSLGVARQQVPEKTKDSPGGPWQFVGLVPLIDLPRHD SAETIRRALNLGVNVKMITGDQLAIGKEIGRRLGMGTNIYPSSVLLGQDKDAYISALQVDELIEKADGFAVVFPEHKYEI IKRLQERKHICGMTGDGVDDVPALKKADIGIAVADATDAARSASDIVLTDHGLRVIISVVITSREILQRMKNYTIYAVSI TIHMVFGFLFIALIWKFDFAPFMVLVMAFLNDGPIMALPGDRVKLKPSPFPESWKLREIFATGVVLGSYLALMTVIFFWV MKDTDFFPNKFGVRSLRYSSDEMMAALYLQVSIISQAQIFVFRSRSWSFVERPSLFLLITFMFSELLTTLVAVYADLFFA RITGIGWGWAGVIWLYSLVTYIPLDFLKFAIRNILSGKA 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 46 46 -
SMART 2 71 70 2.8E-18
SUPERFAMILY 5 835 831 2.09E-75
PANTHER 5 839 835 0.0
PANTHER 5 839 835 0.0
Pfam 6 65 60 4.9E-11
TIGRFAM 21 794 774 5.5E-303
CDD 21 829 809 0.0
Phobius 47 70 24 -
Gene3D 48 142 95 2.7E-26
Phobius 71 81 11 -
Phobius 82 101 20 -
TIGRFAM 85 522 438 5.1E-45
Phobius 102 227 126 -
Pfam 114 288 175 3.4E-42
SUPERFAMILY 116 213 98 2.35E-28
PRINTS 163 177 15 9.1E-39
Gene3D 165 326 162 4.9E-14
Phobius 228 251 24 -
TMHMM 228 250 23 -
Phobius 252 262 11 -
Phobius 263 290 28 -
TMHMM 263 285 23 -
Phobius 291 632 342 -
SFLD 295 625 331 0.0
SFLD 295 625 331 0.0
SUPERFAMILY 309 620 312 1.59E-36
Pfam 309 588 280 2.0E-15
PRINTS 313 327 15 9.1E-39
ProSitePatterns 315 321 7 -
Gene3D 327 474 148 1.6E-45
PRINTS 431 449 19 1.6E-51
PRINTS 469 480 12 9.1E-39
PRINTS 491 501 11 9.1E-39
Gene3D 535 834 300 1.5E-94
PRINTS 546 562 17 1.6E-51
TIGRFAM 549 664 116 6.6E-26
PRINTS 574 593 20 9.1E-39
PRINTS 574 590 17 1.6E-51
PRINTS 597 609 13 9.1E-39
PRINTS 605 630 26 1.6E-51
Phobius 633 653 21 -
TMHMM 633 655 23 -
Phobius 654 658 5 -
Phobius 659 678 20 -
TMHMM 662 679 18 -
Phobius 679 698 20 -
TMHMM 699 721 23 -
Phobius 699 721 23 -
Phobius 722 742 21 -
Phobius 743 762 20 -
PRINTS 748 769 22 1.6E-51
Phobius 763 773 11 -
TMHMM 773 795 23 -
Phobius 774 795 22 -
Phobius 796 806 11 -
TMHMM 805 827 23 -
Phobius 807 827 21 -
Phobius 828 839 12 -

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Nucleotide binding Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
Molecular function Proton-exporting ATPase activity, phosphorylative mechanism Enables the transfer of protons from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) -> ADP + phosphate + H+(out). These transporters use a phosphorylative mechanism, which have a phosphorylated intermediate state during the ion transport cycle.
Cellular component Integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
Biological process Proton export across plasma membrane The directed movement of hydrogen ions (protons) from inside a cell, across the plasma membrane and into the extracellular region.

Expression data

Expression pattern

Expression pattern of LotjaGi5g1v0066100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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