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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0069500 |
| Transcript ID | LotjaGi5g1v0069500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ras-related protein-like protein; TAIR: AT3G53610.1 RAB GTPase homolog 8; Swiss-Prot: sp|O24466|RAE1A_ARATH Ras-related protein RABE1a; TrEMBL-Plants: tr|I3SBM4|I3SBM4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0069500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:11503343..11510333) extracted from Lotus japonicus Gifu genome v1.2.
TGGCCTAAAGTCCTTATGCGAGAGTGGGCAATCAATCTTGGGAATTAATACCACGAGAGTCTCCCGAAGAGCCGGGATCA AAATGTTGAGTTTCAAAAGCATTCTTGATACATAAGAAAACCTTGTCACCCACCACAGCTCAGTAGGTCTTATAGAAAGC TGCATGAAAACCATCCGACCCCGAGGCCTTTAAAGATCTCATTTCAAGAAAACCCCATCTTTAGAGACCTCCCATACCAA ATCACCCTTGAGATGTTCAGGGATAAACGACAAGTTCGGTGTTGGCAAGCAGGAAGTGTCAACCTCAACGGTCTCCGCAA ACAAGCCTCTAAAGTACTCAATCGCTCCAGCCTGAAGAACATCCGTGCCCTTGCACACAGACCCATATGGAAAAGTGAGG CTAATTATACGATTCCTCTTTCGACGAATGGAAATCGCATGGAAAAAAAAAAACAGTATTAAAATTTAACCAAAAATATT TTCTTCACTAATTTCTATTTTCATTGAAAATTGAATCAAGAAAATGAGTAATAACAATAAAAAAAGGTGACACTGCGCTA GAAATTTTCCTTTTCCGAAAAACACTTTTCAACGTCCGGCACCACCACCACCCACCAGCGCCACGATTTCCCTTTCAGAT CTCGACCTTCTTCTCTTCCTTCCGCATCTTCCATTTTCATCTCTCTGTTCAGCAACTTCAAATTTCACTTTCCATTTCGG GATGAAAATCGCATAATTTAATTATTATTTTTTTATATAATTTTTTCCATAACTACTCACTCACCCACGCAACCGTAGCA TCCGTCGTGGATCGGGGTTTTTCTGATCTTCCGCGCTGATCTCGATGGCTGCTCCACCAGCAAGAGCTCGCGCCGATTAC GATTACCTTATCAAGCTTCTTCTCATCGGTGATAGCGGTATTTTCCCTTTTCTTTTTGCAATTTTTTTAATCTAGTTTTT TTCCCTTGGAGTTTCTCTGATGTATCTCAATCTGAATGGTTATGTTACTAATTTTTCTATTAAATGTTTGTTTATGCTTA ACATGAGTTAGTTGATGGTTTATGAGGCCTAAATTAGACATTTTTTTTGTGCATTTATGCTTCAACTTCACTCGGTTCTG TGACTTTTCAGTGGTACATAGATGCTAGAATTTTAGTGTAATAAATGGAGGTAGTGATTGATTGGCATTGGAGAAAAAAA GTTGAAGACTAATTATCAGTTCTTGTTATGATGTTTACTGAATTGGTGTTTGGTAGCTATCAAACAGTGGAAAATTGGGG AAACATTCCAGTTTAGTGCTGGAAAAATGGGTTCTTATTTGGTTTAGTTTGTTACAACTTACAAGTATGCAACTGCCTCG TAAATTTGAACATCCGACTCAACCGTGCTTGTTAATAACTTGTAAATCAAAATGGGAGGGTCATGGAGATTTTGGATTAA TTAATTTGGGAAATATATGTTGTGGGGTTGCATTTGTATCTCATTCCTTTGCTCACATTGACAGGTGTTGGTAAAAGTTG CCTTCTTTTGCGTTTCTCAGATGGATCTTTTACAACTAGTTTTATCACAACCATTGGGTAGGTTCCTGTTCTTTTGAAAG CACCTATTTTACGTTTTCCTTACTCTTCTTTTGCCTCTACCGTGAGGAATCTTACTATAATGTTTGTTTTTCTTCAGCAT TGATTTCAAAATAAGGACCATAGAGCTTGACGGCAAGCGAATCAAGTTGCAAATATGGGATACAGCTGGTCAAGAGCGGT TTCGAACTATTACAACTGGTTAGTTTTTCTTTGTTTGTCGTCCCTGTATAGCTTGAATGTTCGGTGAGAGCTCAATTATG GTTCCTTATTCGTACTTATAAACATTTTTATGATAGATACTAGCAATGGACAAGGAATAAACACTGTATTTTATTGAAAT AATGCTATGAAACTACATTAAATTCCCCACTAACTCAATTATCTCAAAGTTGAAATCTCTCACTCTCTCTGACTAACTCC CTCTAACTAACTAAAATAACACACTAACGAAATAAACAATAAAGGGGTTACCTATAATTTATGTGTAATGATGACATTCA ACAATGTCTATTTACTGATTTATTGATCTTTTATTCTTCTAGGTTGGCTAGGAACTATCTAATTAGTAAATTTTAATGTT TTTTTTGTCCTCAATGTTTTCTTGTTGTGGATTTTTTTGTATCCTATTGACAGCATGCTTTGCATAGCTCCAGAGGAACT GTATATAAATTGGTACAAATGCTAATGGTGTAGTTTGGATATTATTGATTAAGGAAAATAGATTTCCCTTCTCTATCTTG CTAAACCATTTTTTGTCAACCACTCTGTTTTGAGTTGGTGAGTTGAGCTTTAGGTTACTGATTCAAATTTCTGATGCTCT TGATATGACTTGGCAGTCTTTTGTCCTGCTAAACTGCTGGGTTTTTGAGATATATGATTGTATAATAGCTGGATCTTCTG CGTTGTCGCCACTGTTTATAACCTTGTATGTTTTACAAACATCCAATCTTTCTAGTTTCAATGTTATTTGAGCTTAGTTT GACACTATTTATGAATGTAATAAATGACAATGTACCGTATAATGTCTCTTTGTTAATTACATATTTTGATATCAATTAAG AGCCATTAACTGTTTCAGACATGTAAATTTTGAAGCTTATCTCACACATTTAATCTTTCCTTTGCAGCTTACTACCGTGG AGCCATGGGTATTTTGCTAGTTTATGATGTCACTGATGAGTCATCTTTTAACAGTAAGTCCTTCTTCCTCCTTTAGTTTT TAGCTCTGTGGCATCTTTTATTATTTCTCCTCCCACATACATATTTTCATCCAATGTGTGCTTGTTAGATATATGTTAAA AGAAATAAGTATGGGCTCAGGAGCCTAGTGGGCCATCGTTTGTTAGTTAGACCTTGTTAGTTAAAGTTATTATAGTTTGT GCTCTAGTTGTAGAAGCATAGGTAGGATATAAATTGACAGAGAGAGTGTAGGTGAGGGAACTAGTTGGTCAGATAGTTGA CGTGGGAGAGACCGAGCTCGTGAATCCTGGGAGTGGTCTATTGTAAGTATTATTGCATGTCTGCTCTTTGGGTGCTCTTT GGGTTCGGGAGAGTCTATGCAATAAGAAATCATTTTCTTTCTTCTATAAATATGTATTCTATGAACCAATATCTATCAGC TGGTGTTAGACCTCTCAATCCAGGGAGTCTTTCATGGTGCACACGGAATGGAGGCAAGATTGGAGTTCTTGGTGGACGTT TCGGTAGCGTTTGGCAGACATGTGGGAAGGGAACGGAACGAGACATTTGGGTTCCGTTCCATGTTTGTCATATTTTTAAG ATGGAACGGAACAATACATAAGGCCCTTGGAACGGAACACTGTGGTTCCCTAAAAAAAGGTGGAACAAAAGAGAACAGAA CGTAATACTTTTTTAAAATATTTTATATTGACAAAATTACCCCTATGTTTATTCTATTTTTCCTAACTCATATTCTTCAG CTTTTCTTCGTCATCAAAAGCCCTCTCTCGCATCTGCAACTTCCCACCATTTTCATTGTGTTAGAATTCCGTTTCTTCCC TGCAGTCATATTTATCATATCATCATCACTGCCACTCTCGATGAGTGCATGAATGAATGAAACCTTTTCTTTGTTTTGTT TCAATTGTAGATCTGATCTGCGATTTACTTGCAATAATCTACAATCACAACGCATACCAAACCACTAAACCAGTCACGCT TGAAATTGCCAGCAAATCACTAAAATTATTGGTGATTTGCTTAGCCAACAAGACTCAAGCCTTTGTGTAGTGTTTGATGG GGTGATTGGAGAGAAGGTGCTGGCAGAAATGGTGACTGCACCAGGAGGCTATGCGAATGAAGAGGAGACAGAAGAATGAC AAAACCTTAAATTATGATGATAGAACCTGATTCTATTTCTGTAAATGAACCCTAATTCCCAAATTGGGAATCAGAGGAGA TACATGAGAGAGATGCCAAACACCCTCCCTAACCCTAGAAAGAGAACCACTTCTCTCTCTAAACCCAAATCCCAAATGAA TACCAAGATGATACCCCTAATGCTCACTAACCTCTCTTATTTATAGGCAACATGCCTTATTAACTCTCTAACTAACTCTC TAACTCACTCTCTAACAACTAACAATTCCTAACTAACCCCCGCATTCCTATCAATACTCCCCCTGAAAATTTACCTTGTC CTCAAGGTGAAGGACTGAATACAAAAGGGGACATATGAATACAAACTATAGACACGAACAGCTATTCCAAACACCCAACC GTGACAATCACATCCTAACTAACCCCGGATTCCTATCATATGACAATTGGACCAGATTGATCTTCTTGAACTGACCAATG CTTTGGGTCATAGTCAGTGGTTGAATGGTGAAGCAGTTGTATCCATTTATTTCTATGCTGTCAAAATTGCTGAAGGAGGA CCTGCTTGTCTTAAGTGGAGCACGATTCATTAAGAAAGACAATGTTCATTGGAATTGCTGGATTATTGAGTTGTACAAGT GACCTTGGTAGCAAGATTTTAGAACAACAATGGAAACAGATCTGGAGTTCTGCTACTTTGCACGTTTGGACCCAAGCTGC TGCCAAGCCTGAAGGTGGGATGCAGGTCAGAAATTGGGCCAAGACTCCCTCATAATAAGGCAGCTGCTGAGTTCTGCCCC CATTTTACTCAAGAAGTTTAAGATAGACTTTGAGATATGGGTTGCAGCCAGTTGCAGCCATAGATGAGTTCTATGGCAAA ATTGAGGGCTGCATGACTCTCTTGTATGTTCATATTGATGCTTGAGGTGGGCATTGAAGAAGGGCGATGGGACCCTAGTG GATATTCTTACCCTTCATCCAATGCTTTGTCATTAAGCTTTCAAAAGTGGGATCTTGGGGGGGGGGGGACTTCGTTTTTC AGCTATCCCAATTCAGATTGGGGAAAGGTGAACGTTTAGAGGGAGGGGGGGGGGGAGTATTGTTAGATATGTGTCAAAAG AAATAAGGATGAGCTCAACGAGCCAAGTAGGCTAGCCCTTTTCAGTTAGAGCTTGGTAGTTAAAATTGGCATGTCAGAGT TAGTTAGTTAGCAGTCTAGCTGTAGTAGCAAAGGTAGGATATAAATTAATAAATAGAGGGAGAGAGATTAGGCGAGGGAG TTAGTTGGTCAAGAAGTTGAGTCGAAAGAGACCCGGCTCTCAAATCCCTGGAATGGTCTACTGTAAGCATTCTTGCTTTT CTGCTCTTTGTGCATACCTATTCCAGCATAGGAGAATTCTATTGATTAAAAAATATTATCTTTCTTCAATAAATTTCTAA TTCTCTGAAGTCTGAAACCAGTTTCTATCTATGTTTCTCTAAATCAGCATGCATTAGTGGAATGAGTGTTTTTTCAATTA ACTCTAGTATTCAACCATGTAAAGGAGATTCCGGAGCTTTTGGATGGGTTTAAGATATAGCAACTTGACTTGTTTCATCT AATGCTCAGACATCAAGAATTGGATTCGCAACATTGAGCAGCATGCTTCTGACAATGTCAACAAGATCTTAGTGGGGAAT AAGGCTGACATGGATGAAAGCAAAAGGGTTTGTCCCCTCTCACTCTCGCTCTTTTCTATCCTTCTGGTTATGCTTGTACA TTTCTCTTCTATGGTTACTATACTCAGCTTGATGCTGGACCCTATAGGCTGTTCCAACATCAAAAGGTCAAGCTTTGGCA GATGAATATGGCATCAAGTTTTTCGAAACTGTAAGTGGCACTTTTTACTCTTGTTGAAAAGGCATGCTAAAATTGCTGAT TTGTTTTTAATGCTGAGATTATGCTTTTACAGAGTGCAAAAACTAATTTGAATGTGGATGAGGTTTTCTTCTCAATAGCC CGGGACATCAAACAAAGGGTTGCAGATAACGACTCAAAGGCTGAGGTTTTTGTTTTGAACTTTCTCCCTAGTTTTGATGA GTTATCGAATTGCAGTTGTTATTTGTATCATTTCTCTGATTTAGAACTAGTTGATTAATGCTAGACCTTATCCTTGATAT AGTTCATTTTCTTTTTAAGACCATCATTGAGGTGTATATTTGGTTGAATGAGAAAGCATTTACTGAATTTAATTGTCTCA CTCTCATCATTCTTCCACTTAGTTCTTATTTGGTTCTTTGCAGCCCCAGACGCTCAAGATTAACCAACCAGACCAAGGTG CAGGGTCTGCTCAAGCAGCCCAAAAATCTGCTTGCTGTGGCTCTTAAAGCGAAACTCGTGGAAATTCATTTGACCCAGAA AGTTATTTCGTATTAATGACTTACATCAGTGCTTGTACTGTTCTCTTATTATTTCTTAGTTGCTAGTTGCTACTCATTTG GTGTGAATTGTACATCCTTCCATGTCTGGAATTATTTATATATCAAGTTATTGTTGTGTCTATTCAATTTTTTTTTTCCA GGAGCTTTACTATGCAAAACCTGCCTTTGCAAACCATGAACCACAACCTAAGCCCTACTTGGGATTATGATTTTTTTGCT ATGCTTTATATTTTAGAACCCTAGCGGGTTAGTGGTATTATGAATCTAACGTTAAACTCATACCGGGCCGTCTACTTCTC GGACCCTTGGACGTTTGATGTTTCTCGGCCGTAACCTGAAACTTTTATCTTGGTCTTTTTTTGTCAATGATGCTTGAAAT TAAAGCCCCAAAGGTTGTCAAACGACACTTAGGCCCCGTTTGGGAAAACAGCTTAATTAAGCGCTTATGGTCATAAGCGC TTATGACATAAGCGCTTATTCATAAGCTATTTTTAAAAATTTATTGAAATAAATTAAAAATAAGCTGTATATAAGCATAA GCTGTTTTTCATAAGCTGTCCTGAGTAGCTTATGAAAATAAGCTGAAAATAGCTTATGGCAGGCCATAAGCTGTTTGCAT AAGCTCTCCCAAACACTGGCATAAGAGCTTA
CDS sequence (LotjaGi5g1v0069500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGCTCCACCAGCAAGAGCTCGCGCCGATTACGATTACCTTATCAAGCTTCTTCTCATCGGTGATAGCGGTGTTGG TAAAAGTTGCCTTCTTTTGCGTTTCTCAGATGGATCTTTTACAACTAGTTTTATCACAACCATTGGCATTGATTTCAAAA TAAGGACCATAGAGCTTGACGGCAAGCGAATCAAGTTGCAAATATGGGATACAGCTGGTCAAGAGCGGTTTCGAACTATT ACAACTGCTTACTACCGTGGAGCCATGGGTATTTTGCTAGTTTATGATGTCACTGATGAGTCATCTTTTAACAACATCAA GAATTGGATTCGCAACATTGAGCAGCATGCTTCTGACAATGTCAACAAGATCTTAGTGGGGAATAAGGCTGACATGGATG AAAGCAAAAGGGCTGTTCCAACATCAAAAGGTCAAGCTTTGGCAGATGAATATGGCATCAAGTTTTTCGAAACTAGTGCA AAAACTAATTTGAATGTGGATGAGGTTTTCTTCTCAATAGCCCGGGACATCAAACAAAGGGTTGCAGATAACGACTCAAA GGCTGAGCCCCAGACGCTCAAGATTAACCAACCAGACCAAGGTGCAGGGTCTGCTCAAGCAGCCCAAAAATCTGCTTGCT GTGGCTCTTAA
Protein sequence (LotjaGi5g1v0069500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTI TTAYYRGAMGILLVYDVTDESSFNNIKNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSA KTNLNVDEVFFSIARDIKQRVADNDSKAEPQTLKINQPDQGAGSAQAAQKSACCGS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SMART | 1 | 181 | 181 | 0.0038 | – | |
| PANTHER | 6 | 215 | 210 | 9.8E-128 | – | |
| PANTHER | 6 | 215 | 210 | 9.8E-128 | – | |
| Gene3D | 9 | 214 | 206 | 7.4E-74 | – | |
| SUPERFAMILY | 11 | 195 | 185 | 1.25E-64 | ||
| ProSiteProfiles | 11 | 214 | 204 | 38.587 | – | |
| CDD | 13 | 180 | 168 | 2.0913E-121 | – | |
| TIGRFAM | 14 | 170 | 157 | 3.2E-32 | ||
| PRINTS | 16 | 37 | 22 | 1.7E-46 | – | |
| SMART | 16 | 180 | 165 | 7.6E-107 | – | |
| SMART | 17 | 180 | 164 | 4.8E-36 | – | |
| Pfam | 17 | 178 | 162 | 2.3E-66 | ||
| SMART | 18 | 180 | 163 | 4.0E-14 | – | |
| SMART | 21 | 215 | 195 | 1.9E-7 | – | |
| PRINTS | 39 | 55 | 17 | 1.7E-46 | – | |
| PRINTS | 57 | 79 | 23 | 1.7E-46 | – | |
| PRINTS | 119 | 132 | 14 | 1.7E-46 | – | |
| PRINTS | 155 | 177 | 23 | 1.7E-46 | – | |
| MobiDBLite | 182 | 216 | 35 | - | – | |
| MobiDBLite | 189 | 216 | 28 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GTPase activity | Catalysis of the reaction: GTP + H2O = GDP + phosphate. | ||
| Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. |
Expression pattern of LotjaGi5g1v0069500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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