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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0073100 |
| Transcript ID | LotjaGi5g1v0073100.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Myb transcription factor; TAIR: AT3G09600.1 Homeodomain-like superfamily protein; Swiss-Prot: sp|Q8RWU3|RVE8_ARATH Protein REVEILLE 8; TrEMBL-Plants: tr|I1L8Q8|I1L8Q8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0073100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:12128310..12133935) extracted from Lotus japonicus Gifu genome v1.2.
GATGGATACTATAGTACCCTACCCAGACCCTACCTATTGCCATCCTGGACCCCCAGCAAAAACTTTGGCTAGATGCGCAG TGTGAGCGTGTGGTGTGTGAAATAAGAGGAGGATATTCTGTGGTCATCATAGAATAGGACCGTACATGAAAGTTGCAACT TGTGTTCCACAGATCACAACCACAGAACATGTTTTCACCCAACTCGCCACATCATTTTCCTTTCTTTGTATCTGTATCCT CTCTGCTGGATGCAGAGTCAGTAGTCTGTGATCATGAATTCCAACAACACTTCGAATTCTTCTTCTTCTCAGTCAATGGC AGCAGCAGCAGCAGATGGCTCTTCTTCTTCTGGCAAGAAGATCAGAAAGCCTTACACCATTACCAAGTCCAGGGAAAGCT GGACTGATGAAGAACATGACAAGTTTCTTGAAGCTCTTCAACTGTTAGTAGTACTCACTCTTCACTTTTTCTATTTGATT CTCAAACCAAGAAGCTAGAGTTAATTTTTGCTCAAGAAGGAGGGATAGAGGATGATCATGTTGTCTGAAAAAAAAAAATG CATAATTGAGTTGAGTAGGGGAAAAAATAAGCTGATCCAAACATGCTATGAAGTGTGGTTGTGTTTTATTTTCTATCTTC CCAACTTTATTTACCATAATAGATATTGCTCAGCCCTACACAATTGAGCTGAGTAGGTGGAAAATGACAGGGTAGAAAAT TTGGAATGAAATTGAGCAATTTTATACTTGTTTTGCATAACAGATAGTCAGATATTGGGGGAGGTAGAAGTTGAACTCTT TTTTACCTCATGTTTAGAAATTCTTCTACAATTGATTCTAAACTCAAATTCAATTCTGGAGTGAAGCTTGTGAGTAGCTT ATAGGTGTTAGAATTGATTCTGAGATAAAATAAGCTTATATGAATATGCTATGAGTGCAGTGTTTTAAATCGCGGATCGT GGACTATAGCGGTAAGCCAAAAATCCGCTATTTCCAGCCTCTTAAAGCGGAAAAAGCGGGAAATAGCGGGTAAGCCAAAA AAAGCGGTACACTATAGCGCTATAGCGCCGCTATTACCGCTATTTGAAAACACTGATTATTAGTATGTTTGTGATTTATT TTCCATCTTCTCAACTTCATTTTCCATAACAGATACTGTTCAGCCCTAATTTTTTGAACTGCCTTTGATGTAGCCAATGT GCTTTAAATTATGCCAAATACACTGCAACCGAACTGCTGACATTTGTGAATTATTCAGGTTTGACAGGGACTGGAAGAAA ATTGAAGATTTTGTAGGTTCAAAAACGGTTATTCAGGTTAGGAGACTTTTCTTTTCTGCTCTGTTGTAATTGGTAACTTT TTGCACTCGCTTAGAATAGAATGGAACAATCTATTCTTTTCATTTTGGATCCACTTCACTTCCTCTTTTCTAGTGGATCC ATAATATACCACTTTTTTTTTTGATAGTTTTTTTTATCTTATGTCTTGTTTAACATGTTTTTAATATATACCAAATACAG AACAAAACTCACTATGTTCTTTCTCATTCTAATCTGTCTACCTAATGCTATCTGTATTTATATTTTCTTTTTTCATGTCT GTATTCTATTTGGGGATTATTTTTCACTAACTAATAACTATTTCAGATTCGAAGCCATGCCCAAAAATACTTCTTGAAGG TTCAAAAAAATGGGACAGTAGCTCATGTGCCTCCTCCGCGTCCTAAGCGCAAAGCAGCTCATCCTTACCCACAAAAGGCA TCCAAAAATGGTCTGCTTCTATTTGAGATGGTGATATTCTGTCCTTCAAAACCCGAGATTTCATGCATCCCTAACATACT TCATTCTGGGTTGCCAGTTTTGATGCCGCTTATACCAGCATCCATTGCTTATGCTTCTTCCGCAAATACCCTTCCACCTG GATATGCCACATGGGATGAAACTTCTATACTCATGAATGCTGGATCCAATAAATCCATGACCTATCAGGATGAGCTCAAC AAAGGTTACTGGCATGCATAGTTCTTTTTATTATTGTTATTTTGATGTCAATAGTCTTAATTGGCTATAAAGCCTATACT TAATGGAACTGTCCACCACTTATTATGTTATATGACGTTACTGATTCAGCTGATATTGGATCAAAGGGGATAATACAAAT TAGCAACAGCAGTCTTAGTGGTGTTGGAAACTCTACTAGAAGGACACCGTCGTCTGAGATACCAAAGCAAGGGAAGCAAC CTCTGGTGCTTCATGGTAATTTCCTTTCATATTTTTTTTTTCTAATATATTGATTTTCTTTTGTCATTTTTGGATTGGAT TCAGTGAATGATGGTTTATCTGTCATCTTGACCATATTTCGCAGGTTTGCCAGACTTTGCTGAAGTTTACAGTTTCATTG GAAGTGTTTTTGATCCAGATACAAACGGTCATGTCCAGAAGTTGCAGGAAATGGATCCTATAAATTTTGAAACTGTGAGT TGAATACTTGAATGAAACTTGTAATCATTTAGTCAGATAACATAAAGCCTTCTCTCCTTTGACCGAAGTAACTGCAGAGG TGAAACGTAGCTCTATAGTCTGATAGGTATTAATTCACTTAAAAAAAAATTAGCATTAAGATTTATGAGACTCAACAAAA CTTACAGGATGCATGGTAAATTTATAATGAACAATTTTTCCTCCTTCCGGAGCAGAATTTGGAAGTTTGATTAGGCCATT TTGAGCCATACAATCTTGTAGCTGGTAGCATAAAATGTAGTCTTCCTATTTGAACCAGGAAGGTTACTGGCATCAGGTTT CACTTATAAGTTATAAGAGGATCCTTTTTTATTGTAATAGCTTAAAATTGAAACATTAGGCTGTTAGGGGCCAACCCTGA GCATTTGGTACTTGCAAAGTTTACAACCCCATAGGAATACAAGTTAAGTAAGTGGATTAGTTTATTATCAGTTGGGCAGT TGAATCAGAGGCCACTGTATAATTGCATTCATTCTGAAGAGTGAATAACAGACTACATTCAGTTGTAAGGGGAAACTCTT GGGGGATTCTGCCCCTATTCTTCAGTAGATGAGGGTGATGATATGGCTGTACAATAATGGGGTATGTCTACTTTCCTTCA GAGGGAGCTTATGGTCATTGCCACGAACTGGAAGAAGTCCTTCCAGACATAAAACTTCCGAAAACTGATCCAATTATTGC TGTAACTGAGACTACTGCAAGGTGGTGAGGGCCTGATCTTCCACCTCCATATCAGTCCCCTTATTCTCCACAACAGAAAG CTGACAATCTGATGATAACAGTAGCACAGAAGCATACTCCACCTTTGATACCTTCAATGGAGTCTTAGGGGAAACCATGG CCGTGAATAGGCTAGGGTCCTCCTTAATGCTGACATCCTGACCATAATGAGTAAAGTGTATGGTCAAAGTTCTCTATTTA GTGTAGCCATATCCTTAAGCTCATAACCAAACCATGCAAAAAACGATATCCATGGATCCACCCCTCCAAGTTTGAACAGA AGAAAATCAACAGTATACTTGTGATCTGCCAAGGATAAGTGTGATCACAGGTATCTGGTCGTTTTTGTGATGGGCTAAAA GGAAGGTCATATTGGAAACTGTTTCCTTCTTCCTTTGCTAGATACTCATGATAAGGAAGATGTTTTACATCCCTGTGTTA ATGTTACCACCATGAGTGCTTCTCAGTCCTTCTAGAGATTTGTTTGAATCCATGTATGACTGCCTTGATGTTTGGCTTGT TACCTCACAGTGAGATTTGCACGTCCTTGATGAATTGCCGACCCGGCAACTGAATATGCGACTCAGCAAACCCTGAGTGA CTCGCAATTCTTCTTCAACATCCCTGGCTAGAATAACTTGATAGTTTCAGTGATATTCTACGCAAAGCTCTGCTTAAAGT TTGTTAAATTATATATTTACGCCAACGGATGATTGCTATATATGTAACTGGAAAAGCTGTGAGACCAAACTGACACTAAA TGAGCTTTGAAACAACATTGCCAGCATGATGATCTTTACATACTCGAGCTTGATATTGCTGTTTTATAGTACATGAATTT CTTATACATCCCTGGAATGGTGTGCCTATATGAATGAACGTACGAGATACTTAGTATTTTCAAGGTCAAAACTTAAAAAA CAGCTTACCACCTCCCTTCTTCATAAAGGGAGTAGTTCCTATTTCTTCACCCTTCTGGACGCACTATGAATATAAATATT TTTTATCTATCAATTCTCAGTTTATTGACTAGTATATATGTAATGTTCTTCTGCAGGTTTTGTTGTTAATGAGAAATCTC ACTGTTAATTTGTCTAGTCCTGACTTTGAGCCCATTGTAAGTCACAATATCAATCTCAATTATGATTATATAATCTTGCG AGTATTTTCCTAGAAACAGTTTTATTTTCACATAATTGCAATTGTATTCTTTCCAAGTTTGAATTTACTGATGTGCATTG TTTTGTATTCTAATGAATCATAATTAGTCGCCATGGTCCATCAAGGTCATATGCCAAATCCAGGATATACAATCTGATCT CCTTGATGTTTTATATTTCTGAGAAAATTAAACAGTAGCATTTTACAATCATTTGTTTAATCCTAATCTCTCTAGCTTCT GCACAACTTTTTGCCATTATCGTTACATGACTTTTTTAGCACGTCAAAATATTGACTCCCTTGATTATCAGAGTAAAAAT AAGGAATGAAAACCTAATATTATTCATCTGACACTGAATAAAATCATATTTTACACCCAAACTTTGTGATGTATCTCCAA ATAAGAAATTTGACTAGCTGAACTTTATTGTTACCTTCAGAAAGAGGTAATGTCAACATATGATGTCAATACCGTAGGAG TTACTGAAGTCAAGAAGCAGACAACTGATGTGTCATGTCAAAGTGCTTAATCACAAGCAATTTCTTAATATGGTATTGCT TTTTCTTCTCATTCTTTTGCTTTTTTTTCCCCAACTTTTTCCCCATTTCTTTAGTTTATTGTAACATCTACTTCTACAGT TAGCCAAGTGAAGCTTGGATGGAAGTCTGAGATTTTGCTTAGCCAGCAATCAGGCATGGGAGTGTCTTGCACTCGTTGTA AAGCCTGTAAATGTAACCTTAATCTTTTGTAATCATTGCCAGGGTAGTATATGTTAGAAAGCTGATTTTATGGTTTCATA GCTCGTTCAGTGAATGTTTGGAACCATGGTGAAACCAAAATCATGGTGGACAGTCTCAAAAGCCAAGAGAAGTTACTTCT GTCTACCGTGATTTTCCAGACATGCACTTAGAGTGAGTGTTTGGATTTATGCTTTGCACTGAATCCAAAGTGGGTTCTCT TAAAAGCTATGACTTGTAGCTTAAGACTACAAGTGATTCTCAGGCATTTCACCGTGCAAACCAAGAGATAATATGCCTTC AACTAGACATATATGTTCATAAAACATAAAAAGAAAAGGGGAGGGGAGGGGAAGAAAACTATTGTCTATTATCTATGGGG GTTTTCGTTTCTTAATCTATGTAAAGTCGCACTTTGACACACGTACTTGAATGGCTCTCTTTAGATTAGTAGGAACATTT TAAATGTAAAAGCAACTCAATTTCTA
CDS sequence (LotjaGi5g1v0073100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAATTCCAACAACACTTCGAATTCTTCTTCTTCTCAGTCAATGGCAGCAGCAGCAGCAGATGGCTCTTCTTCTTCTGG CAAGAAGATCAGAAAGCCTTACACCATTACCAAGTCCAGGGAAAGCTGGACTGATGAAGAACATGACAAGTTTCTTGAAG CTCTTCAACTGTTTGACAGGGACTGGAAGAAAATTGAAGATTTTGTAGGTTCAAAAACGGTTATTCAGATTCGAAGCCAT GCCCAAAAATACTTCTTGAAGGTTCAAAAAAATGGGACAGTAGCTCATGTGCCTCCTCCGCGTCCTAAGCGCAAAGCAGC TCATCCTTACCCACAAAAGGCATCCAAAAATGTTTTGATGCCGCTTATACCAGCATCCATTGCTTATGCTTCTTCCGCAA ATACCCTTCCACCTGGATATGCCACATGGGATGAAACTTCTATACTCATGAATGCTGGATCCAATAAATCCATGACCTAT CAGGATGAGCTCAACAAAGCTGATATTGGATCAAAGGGGATAATACAAATTAGCAACAGCAGTCTTAGTGGTGTTGGAAA CTCTACTAGAAGGACACCGTCGTCTGAGATACCAAAGCAAGGGAAGCAACCTCTGGTGCTTCATGGTTTGCCAGACTTTG CTGAAGTTTACAGTTTCATTGGAAGTGTTTTTGATCCAGATACAAACGGTCATGTCCAGAAGTTGCAGGAAATGGATCCT ATAAATTTTGAAACTGTTTTGTTGTTAATGAGAAATCTCACTGTTAATTTGTCTAGTCCTGACTTTGAGCCCATTAAAGA GGTAATGTCAACATATGATGTCAATACCGTAGGAGTTACTGAAGTCAAGAAGCAGACAACTGATGTGTCATGTCAAAGTG CTTAA
Protein sequence (LotjaGi5g1v0073100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNSNNTSNSSSSQSMAAAAADGSSSSGKKIRKPYTITKSRESWTDEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSH AQKYFLKVQKNGTVAHVPPPRPKRKAAHPYPQKASKNVLMPLIPASIAYASSANTLPPGYATWDETSILMNAGSNKSMTY QDELNKADIGSKGIIQISNSSLSGVGNSTRRTPSSEIPKQGKQPLVLHGLPDFAEVYSFIGSVFDPDTNGHVQKLQEMDP INFETVLLLMRNLTVNLSSPDFEPIKEVMSTYDVNTVGVTEVKKQTTDVSCQSA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 45 | 45 | - | – | |
| MobiDBLite | 1 | 21 | 21 | - | – | |
| PANTHER | 6 | 278 | 273 | 4.3E-128 | – | |
| PANTHER | 6 | 278 | 273 | 4.3E-128 | – | |
| SUPERFAMILY | 34 | 90 | 57 | 1.27E-17 | ||
| ProSiteProfiles | 35 | 89 | 55 | 15.897 | ||
| TIGRFAM | 38 | 87 | 50 | 1.5E-18 | ||
| SMART | 39 | 87 | 49 | 2.6E-11 | ||
| Pfam | 40 | 84 | 45 | 1.7E-11 | ||
| CDD | 42 | 85 | 44 | 2.71945E-9 | ||
| Gene3D | 43 | 90 | 48 | 4.2E-17 | – | |
| MobiDBLite | 181 | 199 | 19 | - | – | |
| MobiDBLite | 181 | 201 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). |
Expression pattern of LotjaGi5g1v0073100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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