Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

LotjaGi5g1v0077700.2

Overview

Field Value
Gene ID LotjaGi5g1v0077700
Transcript ID LotjaGi5g1v0077700.2
Related isoforms 2
Lotus japonicus genome version Gifu v1.2
Description Receptor-like kinase; TAIR: AT1G16670.1 Protein kinase superfamily protein; Swiss-Prot: sp|C0LGH3|Y5614_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g56140; TrEMBL-Plants: tr|A0A0L9TVW5|A0A0L9TVW5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0077700
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr5:12682062..12687123) extracted from Lotus japonicus Gifu genome v1.2.

GAAAAGTTTAAATTTATTTTTAGTGAAAAAGTAAGTATAATATTTAATTTTAATTTAAGGATATCTATGTCATTTCATAA ACATACATTTTTCATTTCTTACCCTTTTTCTCAAACTAAACAACTTTAAAATCATCTCATTTTTTACTTTCTTTCTCTCT TTTCTCTTTCTTTTTGCAAGCATACCCATAATGATAGGGTTAGATTACTAAAATAATGATGCATTATTTTGATCAGCATG TCAATTTCTAATTTGGGGAACAAAGACACTGGGACAACATCCTGAGAGTGATTTCAGTCCCTCTCTCTTGTAGTGTAAGT GTGAAAGGATTATTATTTGGGTAAATAGTCATATTGGTCCCTAAATGTTCTCACCGACTTCAAAATCGTCCCTGGAAGAA TTTTATTAGGCTCGCGGTCCCCAAATGTGGCAAAAATCAGTCATATTAGTCCCTGACGTTAAAAACCTCTAACGGACGTT AATCCAATTAATAAAAGTCAACATTATCTTTCTAAGTTTATTTCACTTTAGTCCCTTTCTTCTTTCTTTCATCATCTTCA TCCCCCTTCTTCCATCATCTTCACGAAAAACTCCTCCCCTTCTTCGTCAACCCATTATGAAACAAAAATAATAAAAAATC AAATAGAACTAAAAACCCAGAACCTTCTATCATCCTCTCTTCTTCTTCATCATCCATCTTCTTCTTCATCATAACAACTC TCAAACTCTCACACAAAATTATTTAAATCCATAAATCAATAAAAATCTTCAAACTCTCTCCTTAAAATCTCCCAGATCTG ACCCTCACCACCATAAGATTGAAACCTGGATCTGCCATATCTACTACCTCCAGGTCTGCAAATTTTCTATTTACTTTTGC AAATTTTCCGGCACGCGTGTGTGTCTGTTATGGACCCAAAATCAGAATCTGAGATTGCAGAGATGGCTGAGAAAAAAGAG AAGAGAGAAATTACAAGTGCTTCAATGATGATAATTGAATGGCAAACAGGAAAAAAAAAAGAGAGAAGAAAGAAAGAAAA TTCTCCTTCCAAGGGTTTTCACTTAAACAAAGAATTCCCGTTGTAAAACCAAGCTAGTGCTCAGTTCTCCAACTACAGCA CTTCAGAATAAATCCTCTTCTACCTCTTTCTACTTTTTAAACTAATCACAGACATAATCAATTCTCTTACTACTCTTAAT CGACTAACTAGTTGTGCAGCTACTTTTTCTCAATTTCTTTCATTCTTGTGTCCTGGGTCCCATCACCATTTGTGCTTAGG CTTTAAGGCAAGTATAAAGATTAAAGAGAAACTTTCTTTGATTATGGGTCTTTTTGAGGAAAAAGCATATTTTTGTCTGT TGAGAGAAACAGAGAAATCAATATAACATATGATGTATCCGTGTTTCAATTACACACTGGAGAATAAAATTACCTTTCTC ATGAGATACACCCCTTATATATATATATGTTATGGTGTTGAAGGTCAGATCTGGGAAATTTTAAGGAGAGAGCTTGAGGA TTTTTATTGATTTATGGATTTAAATAATTTTGTGTGAGAGTTTGAGAGTTGTTATGATGAAGAAGAAGATGGATGATGAA GAAGAAGAGAGGATGATAGAAGGTTCTGGGTTTTTAATTCTATTTGATTTTTTATTATTTTTGTTTCATAATGAGTTGAT GAAGAAGGGGAGGAGTTTTTGGTGAAGATGATGGAAGAAGGGGATGAAGATGATGAAAGAAAGAAGAAAGAGACTAAAGT GAAAGAAACTTAGAAAGATAATGTTGACTTTTATTAATTGGATTAACGTCCGTTAGAGGTTTTAACGTCAAGGACTAATA TGACAAATTTTTGCCACATTTGGGGACCGCGAGCCTAATAAAATTCTTCCAGGGACAATTTTGAAGTCGGTGGGAACATT TAGGGACCAATGTGACCATTTACCCATTATTATTTGTTATGCCACCATGCAAAGACAAAAAAAAAAATGAAAAGAAAAAG CCTGAAACAGAGAAACGAGGATAAGAATTGAAATTGTCAAAAACAAGACAAGAGGGCTCATAATTGTTGAACACCTACCA GCCGTGTTTTCTTCACTGTTCTCTTCAAAGATATTCCTTCTCAATTCTTCACACGCTCTCTGAAACCTCCATATATATAA AGCACCCAAGTCCTATATCCAAGGTATATAGCTTGACTTACACCTTTCATTATCCATGAAGATTCCCTTTATCAATTGTT TCTCTGCATCATCCATTGAACAAACCAACAATGGTACTATATATGCACAATTCCACATTATATAAATAAAACTAGTTTTA TCTTCTTCCTTTCATTCTCGTCGTGTACTAATTTGGTTTTCATTCATCATGTTTTGATCTGTGTTAATAGATATTCAAGA GGAAGAAAATAATGATGGAAGCTTTCGTTTATTCACTTACAATCAATTGAAATCTGCTACTGCTAATTTTAGTGACAAGG TTGGAGAAGGTGGATTTGGCTCTGTCTACAAGGTAATTTGACTCCATTATGTTGTTTTGTAACAAAGCTTGCAATGGCAA TGCAAATTAAGTTAGTGGTTATGATTGATGGAAGACTAATTTTGGGTTAATTTGGCTTAGTGCAGGGGAGGCTTAGTGAC GGCTCTTTTGTGGCGTTGAAAGTGCTTTCCATTGAGCTAGGATCCATGCGAGGAGAGAAGCAATTTGTGGCAGAATTGGC TACAATGTCAAATATCAAGCACCAAAATCTAGCCACCCTTCGAGGGTATTGTGTAGAAGGAGCACACCGATGCTTGGTCT ATGATTACATGGAGAACAACACCCTTCACCACGCTTTCTTAGGTAATTTCATGATTTCCATGCTTCTGAATTTCTAAATA ATCATAGCTTTTTTTAGTGGTAAATTATTTATTTTGAAAAAATTAGAGTGAATGTTCAATTTCGTGGATGAGAGTGTAAG CGTCGGACAAGTTATTCCTTAAAAGAAGGAAATACATTTTATAATCCCTCATTATGTCAAATGTCAGTCAAGTTAGTCTC TACAGTGAGATAAATTGTCGGTTAACCCAACCGACATTTGACACAATTAGTAACCGCAAAATATTTATTTTTTCTAAGCA CTAATTTGTCTAACACTTACACTTTCAAGACAATATAATCCAACCCACTATTTTTTGAACTTGTTTGCAATTAGGTTCAG AGGAGAGAAGGATGAGATTCAACTGGGAAGCAAGGAAGGAAATATCCATAGGTGTGGCTAGGGGGCTTGCTTTTCTCCAT GAGGAGGTGAAGCCTCATATTGTTCATAGAGACATCAAAGCCAGAAATATTCTTCTTGATAGGAATTTCACACCAAAAGT TTCAGACTTTGGTTTGGCAAAGTTACTTAGAGATGAAGCATCTTACATCAGTACTCGAGTTGCAGGGACATTGTAAGTGA GAACATTAAGAGAAAACTACCTTATTTGTGCATCATTATTTTCTGCCCGACATCCAGATATTTATAGTTTGTGGCGATTT TTAACCTATTCTTTAATTTGTGGTAGTCGAAACCACCACAAATTGGAAGTGTTTGGATATCTCACACTAGTACACAAATA ATTTTTTAGGAAAAGAATATCATGACTAAATAAGTTGAAGAGTTAAATTACTAAATACAAGACACTATACAACCATTTAT TTAAAATCCATTAATTTATCATGTTATAGTTAAATTTGAATTTAAAATTTTTTAAAATGAATAAATGTGATTGAATGCAT GTGTAAATTTTTTAATAGTAGCATATGAATTAAAGGTGAATTAAATTGCTAATTCGAATTCTTTTTATTCTTTGACTAAT AATAGAGCAATTATTGTTATTTGAAAACAGGGGTTATCTAGCTCCAGAGTATGCCAGTTCAGGACAGTTGACAAGAAAAT CAGATGTATATAGCTTTGGGGTATTACTTTTGCAAATTGTCAGCGGCCAAGTTGTTGTAGATGCCTATCAAGACAATGAA AGTTTCATTGTAGAGAAGGTATGAAAATTGAAGTCAAACACTCATTTTAAGATTTTAACTTGTAGCTAACAAATTCAGCC CCACTTTGTGGAAAATAATTGACATTGTGATGTATGAACATATTTTATAAGAGTAAAACCAAATTGTGTTCACATTATTC TGTTATTTTATGATTTGGTCAAATTTAAGCAATGTGCACGTGTCTGAACATGTTTTTGCAGGTGTGGGCAGCTTATGAAG ACAACAATCTATTAAAACAAGTGGATCCTGTGCTTAATGTGAACGTTCAAGTGGAAGAGGCTGTAAAATTCCTTAAAGTG GGGTTGCTTTGTGTGCAAGAAAATGCCAAGCTTAGGCCAAGAATGTCAGAGGTTGTTGAGAAGTTGACCAGCAACGTTGA TATTATAAAAGATGTTTGCATCACAAAACCAGGGCTTGTTGCTGATCTGAGGAACATTAGAATAAGGGAACAAGTGACAT TGAGCTCGCCACAGGAATCAAGTGATGCTGGAGAAAGGTCCATTTGGAGTACGGCTAGTCTTGCTCGTTAATTAGATTGA GCATTAAGGGTGTATTTGTATTTTTGTTGGCATAGATTTCAAGTCGATTTGAATGTGTTTTTGACCAATTCATTACTCTT GTGTCAAACAAGTGAGTGTAATTTTGGTTAATTTGAATATAAATGCAAACACACATAAATGTTTAGGAATAGGATCATGA CTAATTGGTTTTGTACGACATTGCTTGATAAATTTTGTTGAAATGTTTATAATCCTTATTTGTTCTTTGGTTGTTCCATG CATTGAAATGTAGGTTGGTTTATTTTATTTCAGGGAAGTTCAAGTGGAGGACACTCTAATTTTCAAACTCCTTACGACAA GTAATTTCGATTGTGGTTATGTCAATGAGAGAATTTTGATTTTTGGGTTGTAATAATGGAGAATTTTATAGTAATATTAA GAAATTTTTACATAGGGAATTTATACCTTTTTTCAGTGTCATATATTCTCTGACCCATTAGGTGGAAGTAGCTTTTGAAT GCATTCAATTCAGACTTAAAAA
Download Genomic Sequence

CDS sequence (LotjaGi5g1v0077700.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGCGAGGAGAGAAGCAATTTGTGGCAGAATTGGCTACAATGTCAAATATCAAGCACCAAAATCTAGCCACCCTTCGAGG GTATTGTGTAGAAGGAGCACACCGATGCTTGGTCTATGATTACATGGAGAACAACACCCTTCACCACGCTTTCTTAGGTT CAGAGGAGAGAAGGATGAGATTCAACTGGGAAGCAAGGAAGGAAATATCCATAGGTGTGGCTAGGGGGCTTGCTTTTCTC CATGAGGAGGTGAAGCCTCATATTGTTCATAGAGACATCAAAGCCAGAAATATTCTTCTTGATAGGAATTTCACACCAAA AGTTTCAGACTTTGGTTTGGCAAAGTTACTTAGAGATGAAGCATCTTACATCAGTACTCGAGTTGCAGGGACATTGGGTT ATCTAGCTCCAGAGTATGCCAGTTCAGGACAGTTGACAAGAAAATCAGATGTATATAGCTTTGGGGTATTACTTTTGCAA ATTGTCAGCGGCCAAGTTGTTGTAGATGCCTATCAAGACAATGAAAGTTTCATTGTAGAGAAGGTGTGGGCAGCTTATGA AGACAACAATCTATTAAAACAAGTGGATCCTGTGCTTAATGTGAACGTTCAAGTGGAAGAGGCTGTAAAATTCCTTAAAG TGGGGTTGCTTTGTGTGCAAGAAAATGCCAAGCTTAGGCCAAGAATGTCAGAGGTTGTTGAGAAGTTGACCAGCAACGTT GATATTATAAAAGATGTTTGCATCACAAAACCAGGGCTTGTTGCTGATCTGAGGAACATTAGAATAAGGGAACAAGTGAC ATTGAGCTCGCCACAGGAATCAAGTGATGCTGGAGAAAGGTCCATTTGGAGTACGGCTAGTCTTGCTCGTTAA
Download CDS Sequence

Protein sequence (LotjaGi5g1v0077700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MRGEKQFVAELATMSNIKHQNLATLRGYCVEGAHRCLVYDYMENNTLHHAFLGSEERRMRFNWEARKEISIGVARGLAFL HEEVKPHIVHRDIKARNILLDRNFTPKVSDFGLAKLLRDEASYISTRVAGTLGYLAPEYASSGQLTRKSDVYSFGVLLLQ IVSGQVVVDAYQDNESFIVEKVWAAYEDNNLLKQVDPVLNVNVQVEEAVKFLKVGLLCVQENAKLRPRMSEVVEKLTSNV DIIKDVCITKPGLVADLRNIRIREQVTLSSPQESSDAGERSIWSTASLAR
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Gene3D
G3DSA:3.30.200.20
1 42 42 7.0E-12 –
PANTHER
PTHR27006:SF49
1 277 277 1.1E-133 –
PANTHER
PTHR27006
1 277 277 1.1E-133 –
SMART
SM00220
1 237 237 3.4E-12
IPR000719
ProSiteProfiles
PS50011
1 240 240 29.842
IPR000719
PIRSF
PIRSF000654
2 247 246 2.3E-25 –
SUPERFAMILY
SSF56112
3 236 234 3.37E-62
IPR011009
Pfam
PF07714
4 236 233 4.6E-39
IPR001245
Gene3D
G3DSA:1.10.510.10
43 248 206 6.4E-58 –
ProSitePatterns
PS00108
88 100 13 -
IPR008271
MobiDBLite
mobidb-lite
271 290 20 - –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

Genome browser

Expression data

Expression pattern

Expression pattern of LotjaGi5g1v0077700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…