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Field | Value |
---|---|
Gene ID | LotjaGi5g1v0077800 |
Transcript ID | LotjaGi5g1v0077800.2 |
Related isoforms 1 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Receptor-like kinase; TAIR: AT1G16670.1 Protein kinase superfamily protein; Swiss-Prot: sp|C0LGH3|Y5614_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g56140; TrEMBL-Plants: tr|A0A0L9TVW5|A0A0L9TVW5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0077800 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:12700027..12702417) extracted from Lotus japonicus Gifu genome v1.2.
CCTCACCTCACGGCTCACGTACCATCTCAGCATCTTCCACAACAAAAAGGTTTCGTCATCTCCCTCAAAAAAAGAATTTA AAATTTCCAAAATGGAGAAACGAGGTTAAGAAACTTTCAAGTAGTAGTAGCTAATTGTTGAATACACGTTCTCCTAAGCC TTCATCATTCATTCATATATAACACCGAAAACTTACATCGTAGGCAATTATTATTTACCCTTTTCTTAAACTATACCATG ATTTCTTTTCTCGCTTGTTTCTCTGCATCAACCACCGAACAAGGTAATTATAGTACAAATTGAATAAAACAAGTTTTCTC AACTTTGATGATTTGGTTTTCAATTTTTCATTCATCATGTTTTGAACTTACATGCAGATTATCCAGAGGAAGAGAGTGAT GGAAGCTTTCGTGTGTTCACTTATAACCAATTGAGATCAGCCACTGCTAATTTCAGTGACAAGATTGGAGAAGGTGGTTT TGGCTCTGTCTACAAGGTAATTTGACTCCATTTTGCTTTGCAATTAGAGTTTGAACTAAAATTAGCTTACTGCATGTTTG GATATCATTCTACAATTGTTTCGAATACCAGAATTAATTCTGGATTTTGGGGGAAGCTTCTATGAGTAGCTTCTAGAGTT TTAAAAAAGAGTTGATTTTGAGAAAAAAGAAGCTGATCAAAATATGCTATTAATTAGTGTTCATGGTTGGTGTTTGTGAT TGATTGGAAATGACTTATTGGGGTTAACTTGATTTGTAAAGGGAAGGCTTAGGGATGGAGCTTTTGTGGCGGTGAAAGTG ATTTCAGTTGAGGTAGAATCCATGCGTGGAGAGAGGGAATTTGTGGCGGAATTGGCAACGATGGCGAATATCAAGCACCA AAACCTGGCCATTCTTAGAGGGTGTTGTGTGGAAGGAGCACACAGATATTTGGTCTATGAATACATGGAGAACAAAACCC TCCACCATACTTTCCTAGGTAAGTTTGGGATTTCTGTCCTTCTGAATTTCCAAAATAATAAATTTTTGCATATAAGGGTA GTAGCAGTAAAGGACTAGAAATGATTCTGTTTTTATGGATTTTGATCGATAGGTTCTGAGGATAGAAGAATGAAATTCAG CTGGGAAGCAAGGAAAAACATATCCATTGGTGTGGCTAGAGGCTTTGTCTTTCTCCATGAGGAGCTGAGGCCTCATATTG TGCACAGAGACATCAAAGCAGATAATATACTTCTTGATAAGAATTTCACACCAAGAGTTTCAGACTTTGGTCTGGCAAAA TTGCTGAGAGATGAAGCATCTTACATCAGTACTAGAGTTGCAGGGACATTGTGAGTGAGAATGCTAAAAACAGTTACCAT GACTAAATCATTTGAATCCTTTTTATTCCTTGACTAATAATGGGGCAATTGTTGTTTTTGAAATGAACAGGGGTTATCTA GCTCCAGAGTATGCTAGTTCAGGAAAGTTGACAAGAAAATCAGATGTTTATAGCTTTGGGGTATTGCTTTTACAAATTGT CACTGGCCAAGCAGTTGTAGATGCCTATCAAGATGATGAACGTTTCATTGTAGAGAAGGTATGAAAATTGGAGTAGAAAA GAACATTTTAACTTGTGGCTAGCAAATTCAGCCTAACTTTGTGGGGGGAAATTGGGAGAGAAAACAAATGATAGAGTTTA AAGTTTAAACCAAATGGGGTTCCCTTTATTATGTTGTTTCAACTGTTAATTTTATGATTTGGTCAAGGTGAACAAACATG AATGTGTTGGTTTGAACATGTTTGCAGGCTTGGACAGCTTATGAAGCCAACAATCTATTTAGTGTGGTGGATCCAGTGCT TGATTCGAGCGTTCCCGTGGAAGAGGCCATAAAATTTCTCAAAGTTGGTTTGCTTTGTGTGCAGCAAAACGCCAAGCTTC GGCCGCGAATGTCAGAGGTTGTAGAGAAGCTGACAGTTAATGTTGATATGAAAGATGTTTCAATTTCAAAACCTGGGTTT GTTGCTGATCTCAGGAACATTAGAATCAAGCAAGAAGTAGCCATGAACTCATTAAGTCCTTCTGGAACATCCTTTGCAAG CTCCATTTGGAGTATGGCCAGTAGTCTTGCTCGTTAATTAGATTCACCATTCATTTGTTTAGGAAATTAGGAAAGGGATC ATGCCAAATTTTGTTGTATAGCATTGCTTGATTGAGTTTTGTTGAAATGTTTATAATCCTGTTTTGTTCTTTGGCTGTAT ATCATGCAATGTAGGTTGATTAAATTTGTTTCTTTTTTTAATTAATTTGTGGAATTTTTTTCCTTGGTGAGTGCATCTAG AGGGCCCTGCAATTTGCAAAACCTGCTCTCATGTGGACAGTTTTGTCATCAATTTTCATATTAGTTGGTGA
CDS sequence (LotjaGi5g1v0077800.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCGTGGAGAGAGGGAATTTGTGGCGGAATTGGCAACGATGGCGAATATCAAGCACCAAAACCTGGCCATTCTTAGAGG GTGTTGTGTGGAAGGAGCACACAGATATTTGGTCTATGAATACATGGAGAACAAAACCCTCCACCATACTTTCCTAGGTT CTGAGGATAGAAGAATGAAATTCAGCTGGGAAGCAAGGAAAAACATATCCATTGGTGTGGCTAGAGGCTTTGTCTTTCTC CATGAGGAGCTGAGGCCTCATATTGTGCACAGAGACATCAAAGCAGATAATATACTTCTTGATAAGAATTTCACACCAAG AGTTTCAGACTTTGGTCTGGCAAAATTGCTGAGAGATGAAGCATCTTACATCAGTACTAGAGTTGCAGGGACATTGGGTT ATCTAGCTCCAGAGTATGCTAGTTCAGGAAAGTTGACAAGAAAATCAGATGTTTATAGCTTTGGGGTATTGCTTTTACAA ATTGTCACTGGCCAAGCAGTTGTAGATGCCTATCAAGATGATGAACGTTTCATTGTAGAGAAGGCTTGGACAGCTTATGA AGCCAACAATCTATTTAGTGTGGTGGATCCAGTGCTTGATTCGAGCGTTCCCGTGGAAGAGGCCATAAAATTTCTCAAAG TTGGTTTGCTTTGTGTGCAGCAAAACGCCAAGCTTCGGCCGCGAATGTCAGAGGTTGTAGAGAAGCTGACAGTTAATGTT GATATGAAAGATGTTTCAATTTCAAAACCTGGGTTTGTTGCTGATCTCAGGAACATTAGAATCAAGCAAGAAGTAGCCAT GAACTCATTAAGTCCTTCTGGAACATCCTTTGCAAGCTCCATTTGGAGTATGGCCAGTAGTCTTGCTCGTTAA
Protein sequence (LotjaGi5g1v0077800.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRGEREFVAELATMANIKHQNLAILRGCCVEGAHRYLVYEYMENKTLHHTFLGSEDRRMKFSWEARKNISIGVARGFVFL HEELRPHIVHRDIKADNILLDKNFTPRVSDFGLAKLLRDEASYISTRVAGTLGYLAPEYASSGKLTRKSDVYSFGVLLLQ IVTGQAVVDAYQDDERFIVEKAWTAYEANNLFSVVDPVLDSSVPVEEAIKFLKVGLLCVQQNAKLRPRMSEVVEKLTVNV DMKDVSISKPGFVADLRNIRIKQEVAMNSLSPSGTSFASSIWSMASSLAR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 1 | 276 | 276 | 3.5E-134 | – | |
SMART | 1 | 238 | 238 | 9.6E-12 | ||
ProSiteProfiles | 1 | 238 | 238 | 30.082 | ||
PANTHER | 1 | 276 | 276 | 3.5E-134 | – | |
Gene3D | 1 | 42 | 42 | 5.9E-11 | – | |
PIRSF | 2 | 245 | 244 | 1.9E-23 | – | |
Pfam | 5 | 234 | 230 | 9.7E-38 | ||
SUPERFAMILY | 5 | 236 | 232 | 4.86E-61 | ||
Gene3D | 43 | 248 | 206 | 1.2E-56 | – | |
ProSitePatterns | 88 | 100 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi5g1v0077800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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